RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W TPO2P53283 614 aa2.62□□□□□ -1.99
LCD1YDR499W ERG5P54781 538 aa2.62□□□□□ -1.99
LCD1YDR499W PPR1P07272 904 aaPredicted RBP2.62□□□□□ -1.99
LCD1YDR499W TOK1P40310 691 aa2.62□□□□□ -1.99
LCD1YDR499W SDP1P40479 209 aa2.62□□□□□ -1.99
LCD1YDR499W TDA5Q06417 326 aaKnown RBP2.62□□□□□ -1.99
LCD1YDR499W TYE7P33122 291 aaPredicted RBP2.61□□□□□ -1.99
LCD1YDR499W YBR284WP38150 797 aa2.61□□□□□ -1.99
LCD1YDR499W IRR1P40541 1150 aa2.61□□□□□ -1.99
LCD1YDR499W GND2P53319 492 aa2.61□□□□□ -1.99
LCD1YDR499W TIM44Q01852 431 aa2.61□□□□□ -1.99
LCD1YDR499W YPR071WQ12346 211 aa2.61□□□□□ -1.99
LCD1YDR499W SWM1Q12379 170 aa2.61□□□□□ -1.99
LCD1YDR499W FBP1P09201 348 aa2.61□□□□□ -1.99
LCD1YDR499W MTH1P35198 433 aa2.61□□□□□ -1.99
LCD1YDR499W YBR184WP38299 523 aa2.61□□□□□ -1.99
LCD1YDR499W SIT1P39980 628 aa2.61□□□□□ -1.99
LCD1YDR499W SPF1P39986 1215 aaKnown RBP2.61□□□□□ -1.99
LCD1YDR499W CCM1P48237 864 aaPredicted RBP2.61□□□□□ -1.99
LCD1YDR499W YKR011CQ02209 353 aa2.61□□□□□ -1.99
LCD1YDR499W LGE1Q02796 332 aaKnown RBP2.61□□□□□ -1.99
LCD1YDR499W IRC10Q08118 586 aa2.61□□□□□ -1.99
LCD1YDR499W RPS9AO13516 197 aaKnown RBP2.6□□□□□ -1.99
LCD1YDR499W TUB3P09734 445 aaKnown RBP2.6□□□□□ -1.99
LCD1YDR499W HBS1P32769 611 aaKnown RBP2.6□□□□□ -1.99
LCD1YDR499W CTF13P35203 478 aa2.6□□□□□ -1.99
LCD1YDR499W SPC42P36094 363 aa2.6□□□□□ -1.99
LCD1YDR499W PPS1P38148 807 aa2.6□□□□□ -1.99
LCD1YDR499W FKH2P41813 862 aa2.6□□□□□ -1.99
LCD1YDR499W QRI1P43123 477 aaKnown RBP2.6□□□□□ -1.99
LCD1YDR499W HDA1P53973 706 aa2.6□□□□□ -1.99
LCD1YDR499W LCD1Q04377 747 aa2.6□□□□□ -1.99
LCD1YDR499W SVF1Q05515 481 aa2.6□□□□□ -1.99
LCD1YDR499W FRE5Q08908 694 aa2.6□□□□□ -1.99
LCD1YDR499W MET3P08536 511 aa2.6□□□□□ -1.99
LCD1YDR499W URA1P28272 314 aaPredicted RBP2.6□□□□□ -1.99
LCD1YDR499W REC104P33323 182 aa2.6□□□□□ -1.99
LCD1YDR499W CTF8P38877 133 aa2.6□□□□□ -1.99
LCD1YDR499W ALR2P43553 858 aa2.6□□□□□ -1.99
LCD1YDR499W PUS2P53167 370 aa2.6□□□□□ -1.99
LCD1YDR499W BUL2Q03758 920 aaKnown RBP2.6□□□□□ -1.99
LCD1YDR499W PRP9P19736 530 aaKnown RBP2.59□□□□□ -1.99
LCD1YDR499W ELO3P40319 345 aa2.59□□□□□ -1.99
LCD1YDR499W ATF1P40353 525 aa2.59□□□□□ -1.99
LCD1YDR499W PFD1P46988 109 aa2.59□□□□□ -1.99
LCD1YDR499W MRPS35P53292 345 aa2.59□□□□□ -1.99
LCD1YDR499W DLT1Q04216 342 aa2.59□□□□□ -1.99
LCD1YDR499W TRM11Q12463 433 aa2.59□□□□□ -1.99
LCD1YDR499W PRP4P20053 465 aaKnown RBP2.58□□□□□ -2
LCD1YDR499W RPP1P38786 293 aa2.58□□□□□ -2
LCD1YDR499W YHR078WP38799 552 aa2.58□□□□□ -2
LCD1YDR499W VHR1P40522 640 aa2.58□□□□□ -2
LCD1YDR499W UBX5Q06682 500 aa2.58□□□□□ -2
LCD1YDR499W CAF20P12962 161 aaKnown RBP2.58□□□□□ -2
LCD1YDR499W MUP1P50276 574 aa2.58□□□□□ -2
LCD1YDR499W HBT1Q07653 1046 aaKnown RBP2.58□□□□□ -2
LCD1YDR499W CDC11P32458 415 aa2.57□□□□□ -2
LCD1YDR499W SDS3P40505 327 aa2.57□□□□□ -2
LCD1YDR499W CRR1Q05790 422 aa2.57□□□□□ -2
LCD1YDR499W FMP25Q08023 583 aa2.57□□□□□ -2
LCD1YDR499W MSD1P15179 658 aaKnown RBP2.57□□□□□ -2
LCD1YDR499W PEX2P32800 271 aa2.57□□□□□ -2
LCD1YDR499W ADY4Q05955 493 aa2.57□□□□□ -2
LCD1YDR499W MRH1Q12117 320 aaPredicted RBP2.57□□□□□ -2
LCD1YDR499W HAL9Q12180 1030 aa2.57□□□□□ -2
LCD1YDR499W MPH2P0CD99 609 aa2.56□□□□□ -2
LCD1YDR499W GRX1P25373 110 aaKnown RBP2.56□□□□□ -2
LCD1YDR499W YHL017WP38745 532 aa2.56□□□□□ -2
LCD1YDR499W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
LCD1YDR499W DUS1P53759 423 aaKnown RBP2.56□□□□□ -2
LCD1YDR499W EAF1Q06337 982 aa2.56□□□□□ -2
LCD1YDR499W ENV7Q12003 364 aa2.56□□□□□ -2
LCD1YDR499W YOR022CQ12204 715 aa2.56□□□□□ -2
LCD1YDR499W CYS3P31373 394 aaKnown RBP2.56□□□□□ -2
LCD1YDR499W CUE2P36075 443 aaKnown RBP2.56□□□□□ -2
LCD1YDR499W DAS1P47005 663 aa2.56□□□□□ -2
LCD1YDR499W PKH1Q03407 766 aa2.56□□□□□ -2
LCD1YDR499W BDF2Q07442 638 aa2.56□□□□□ -2
LCD1YDR499W HBN1Q96VH4 193 aa2.56□□□□□ -2
LCD1YDR499W TOP3P13099 656 aa2.55□□□□□ -2
LCD1YDR499W ARE1P25628 610 aa2.55□□□□□ -2
LCD1YDR499W RPL8BP29453 256 aaKnown RBP2.55□□□□□ -2
LCD1YDR499W PET10P36139 283 aa2.55□□□□□ -2
LCD1YDR499W SAK1P38990 1142 aa2.55□□□□□ -2
LCD1YDR499W ASI2P53895 289 aa2.55□□□□□ -2
LCD1YDR499W WRS1Q12109 432 aaKnown RBP2.55□□□□□ -2
LCD1YDR499W DAL7P21826 554 aa2.54□□□□□ -2
LCD1YDR499W YBR053CP38235 358 aa2.54□□□□□ -2
LCD1YDR499W PCL5P38794 229 aa2.54□□□□□ -2
LCD1YDR499W PZF1P39933 429 aa2.54□□□□□ -2
LCD1YDR499W YJL163CP46996 555 aa2.54□□□□□ -2
LCD1YDR499W UTP8P53276 713 aaKnown RBP2.54□□□□□ -2
LCD1YDR499W MUS81Q04149 632 aaPredicted RBP2.54□□□□□ -2
LCD1YDR499W PRC1P00729 532 aa2.54□□□□□ -2
LCD1YDR499W YCL002CP25565 263 aa2.54□□□□□ -2
LCD1YDR499W TDP1P38319 544 aa2.54□□□□□ -2
LCD1YDR499W SSY5P47002 699 aa2.54□□□□□ -2
LCD1YDR499W NIT3P49954 291 aa2.54□□□□□ -2
LCD1YDR499W ERP6P53198 216 aa2.54□□□□□ -2
LCD1YDR499W SNU71P53207 620 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 80.4 ms