RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeast

Gene RPB7, Length 516 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB7	YDR404C	DBP2	P24783	546 aa	Known RBP	5.81	□□□□□ -1.48
RPB7	YDR404C	AAR2	P32357	355 aa	Predicted RBP	5.81	□□□□□ -1.48
RPB7	YDR404C	SFP1	P32432	683 aa		5.81	□□□□□ -1.48
RPB7	YDR404C	LRG1	P35688	1017 aa		5.81	□□□□□ -1.48
RPB7	YDR404C	YJL045W	P47052	634 aa		5.81	□□□□□ -1.48
RPB7	YDR404C	YJR008W	P47085	338 aa		5.81	□□□□□ -1.48
RPB7	YDR404C	FOL2	P51601	243 aa	Known RBP	5.81	□□□□□ -1.48
RPB7	YDR404C	PRP43	P53131	767 aa	Known RBP	5.81	□□□□□ -1.48
RPB7	YDR404C	TPO2	P53283	614 aa		5.81	□□□□□ -1.48
RPB7	YDR404C	YNR029C	P53729	429 aa	Known RBP	5.81	□□□□□ -1.48
RPB7	YDR404C	TFB2	Q02939	513 aa		5.81	□□□□□ -1.48
RPB7	YDR404C	DUS3	Q06053	668 aa	Known RBP	5.81	□□□□□ -1.48
RPB7	YDR404C	SPO21	Q12411	609 aa		5.81	□□□□□ -1.48
RPB7	YDR404C	RPL11A	P0C0W9	174 aa	Known RBP	5.8	□□□□□ -1.48
RPB7	YDR404C	ELM1	P32801	640 aa		5.8	□□□□□ -1.48
RPB7	YDR404C	DOM34	P33309	386 aa		5.8	□□□□□ -1.48
RPB7	YDR404C	SEG2	P34250	1132 aa		5.8	□□□□□ -1.48
RPB7	YDR404C	GEM1	P39722	662 aa		5.8	□□□□□ -1.48
RPB7	YDR404C	MXR1	P40029	184 aa		5.8	□□□□□ -1.48
RPB7	YDR404C	UBP6	P43593	499 aa	Known RBP	5.8	□□□□□ -1.48
RPB7	YDR404C	ATG36	P46983	293 aa		5.8	□□□□□ -1.48
RPB7	YDR404C	URN1	Q06525	465 aa	Known RBP	5.8	□□□□□ -1.48
RPB7	YDR404C	YPR071W	Q12346	211 aa		5.8	□□□□□ -1.48
RPB7	YDR404C	RPL11B	Q3E757	174 aa	Predicted RBP	5.8	□□□□□ -1.48
RPB7	YDR404C	MSD1	P15179	658 aa	Known RBP	5.79	□□□□□ -1.48
RPB7	YDR404C	MDL2	P33311	773 aa		5.79	□□□□□ -1.48
RPB7	YDR404C	PET10	P36139	283 aa		5.79	□□□□□ -1.48
RPB7	YDR404C	TYS1	P36421	394 aa	Known RBP	5.79	□□□□□ -1.48
RPB7	YDR404C	GPB2	P39717	880 aa		5.79	□□□□□ -1.48
RPB7	YDR404C	NBA1	Q08229	501 aa	Known RBP	5.79	□□□□□ -1.48
RPB7	YDR404C	GAS1	P22146	559 aa	Known RBP	5.78	□□□□□ -1.48
RPB7	YDR404C	MEF1	P25039	761 aa		5.78	□□□□□ -1.48
RPB7	YDR404C	PPH3	P32345	308 aa		5.78	□□□□□ -1.48
RPB7	YDR404C	SIT1	P39980	628 aa		5.78	□□□□□ -1.48
RPB7	YDR404C	MDM12	Q92328	271 aa		5.78	□□□□□ -1.48
RPB7	YDR404C	CAT8	P39113	1433 aa		5.77	□□□□□ -1.49
RPB7	YDR404C	COQ4	O13525	335 aa		5.77	□□□□□ -1.49
RPB7	YDR404C	AIM26	P32858	118 aa		5.77	□□□□□ -1.49
RPB7	YDR404C	ORC3	P54790	616 aa		5.77	□□□□□ -1.49
RPB7	YDR404C	ATG13	Q06628	738 aa		5.77	□□□□□ -1.49
RPB7	YDR404C	ADE8	P04161	214 aa		5.76	□□□□□ -1.49
RPB7	YDR404C	SAM35	P14693	329 aa		5.76	□□□□□ -1.49
RPB7	YDR404C	RAD53	P22216	821 aa		5.76	□□□□□ -1.49
RPB7	YDR404C	RNQ1	P25367	405 aa		5.76	□□□□□ -1.49
RPB7	YDR404C	SRO9	P25567	434 aa	Known RBP	5.76	□□□□□ -1.49
RPB7	YDR404C	SCT1	P32784	759 aa		5.76	□□□□□ -1.49
RPB7	YDR404C	YSC84	P32793	468 aa		5.76	□□□□□ -1.49
RPB7	YDR404C	YRO2	P38079	344 aa		5.76	□□□□□ -1.49
RPB7	YDR404C	CCZ1	P38273	704 aa		5.76	□□□□□ -1.49
RPB7	YDR404C	NIT1	P40447	199 aa		5.76	□□□□□ -1.49
RPB7	YDR404C	HLJ1	P48353	224 aa		5.76	□□□□□ -1.49
RPB7	YDR404C	RTS3	P53289	263 aa		5.76	□□□□□ -1.49
RPB7	YDR404C	YNL193W	P53870	558 aa		5.76	□□□□□ -1.49
RPB7	YDR404C	LPX1	Q12405	387 aa	Known RBP	5.76	□□□□□ -1.49
RPB7	YDR404C	CDC12	P32468	407 aa	Known RBP	5.75	□□□□□ -1.49
RPB7	YDR404C	DSS1	P39112	969 aa		5.75	□□□□□ -1.49
RPB7	YDR404C	SRP1	Q02821	542 aa	Known RBP	5.75	□□□□□ -1.49
RPB7	YDR404C	BCK1	Q01389	1478 aa		5.75	□□□□□ -1.49
RPB7	YDR404C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
RPB7	YDR404C	AFR1	P33304	620 aa		5.74	□□□□□ -1.49
RPB7	YDR404C	SLA2	P33338	968 aa		5.74	□□□□□ -1.49
RPB7	YDR404C	YKL151C	P36059	337 aa		5.74	□□□□□ -1.49
RPB7	YDR404C	ERT1	P38140	529 aa		5.74	□□□□□ -1.49
RPB7	YDR404C	SAH1	P39954	449 aa	Known RBP	5.74	□□□□□ -1.49
RPB7	YDR404C	RPN3	P40016	523 aa	Known RBP	5.74	□□□□□ -1.49
RPB7	YDR404C	YFL054C	P43549	646 aa		5.74	□□□□□ -1.49
RPB7	YDR404C	ALG2	P43636	503 aa		5.74	□□□□□ -1.49
RPB7	YDR404C	BUL2	Q03758	920 aa	Known RBP	5.74	□□□□□ -1.49
RPB7	YDR404C	LCD1	Q04377	747 aa		5.74	□□□□□ -1.49
RPB7	YDR404C	HRQ1	Q05549	1077 aa		5.74	□□□□□ -1.49
RPB7	YDR404C	ACM1	Q08981	209 aa		5.74	□□□□□ -1.49
RPB7	YDR404C	NPP1	P25353	742 aa		5.73	□□□□□ -1.49
RPB7	YDR404C	VBA3	P25594	458 aa		5.73	□□□□□ -1.49
RPB7	YDR404C	TOK1	P40310	691 aa		5.73	□□□□□ -1.49
RPB7	YDR404C	HOS3	Q02959	697 aa	Known RBP	5.73	□□□□□ -1.49
RPB7	YDR404C	YLR001C	Q07895	862 aa		5.73	□□□□□ -1.49
RPB7	YDR404C	RSB1	Q08417	382 aa		5.73	□□□□□ -1.49
RPB7	YDR404C	SPS1	P08458	490 aa		5.72	□□□□□ -1.49
RPB7	YDR404C	GSY1	P23337	708 aa		5.72	□□□□□ -1.49
RPB7	YDR404C	UBP5	P39944	805 aa		5.72	□□□□□ -1.49
RPB7	YDR404C	SEC26	P41810	973 aa	Known RBP	5.72	□□□□□ -1.49
RPB7	YDR404C	PMT3	P47190	753 aa		5.72	□□□□□ -1.49
RPB7	YDR404C	YGR237C	P50089	785 aa		5.72	□□□□□ -1.49
RPB7	YDR404C	TNA1	P53322	534 aa		5.72	□□□□□ -1.49
RPB7	YDR404C	THI73	Q07904	523 aa		5.72	□□□□□ -1.49
RPB7	YDR404C	RSC58	Q07979	502 aa		5.72	□□□□□ -1.49
RPB7	YDR404C	PDR11	P40550	1411 aa		5.72	□□□□□ -1.49
RPB7	YDR404C	SNF5	P18480	905 aa		5.71	□□□□□ -1.5
RPB7	YDR404C	UGA2	P38067	497 aa		5.71	□□□□□ -1.5
RPB7	YDR404C	ETP1	P38748	585 aa	Known RBP	5.71	□□□□□ -1.5
RPB7	YDR404C	FOL1	P53848	824 aa		5.71	□□□□□ -1.5
RPB7	YDR404C	YOR352W	Q08816	343 aa		5.71	□□□□□ -1.5
RPB7	YDR404C	GEA1	P47102	1408 aa	Predicted RBP	5.71	□□□□□ -1.5
RPB7	YDR404C	CDC9	P04819	755 aa		5.7	□□□□□ -1.5
RPB7	YDR404C	REC104	P33323	182 aa		5.7	□□□□□ -1.5
RPB7	YDR404C	SPC29	P33419	253 aa		5.7	□□□□□ -1.5
RPB7	YDR404C	PAF1	P38351	445 aa		5.7	□□□□□ -1.5
RPB7	YDR404C	UME1	Q03010	460 aa		5.7	□□□□□ -1.5
RPB7	YDR404C	NUP145	P49687	1317 aa		5.7	□□□□□ -1.5
RPB7	YDR404C	MRC1	P25588	1096 aa		5.69	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 94.5 ms