RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W MSH2P25847 964 aa1.17□□□□□ -2.22
SCC2YDR180W UGA3P26370 528 aa1.17□□□□□ -2.22
SCC2YDR180W DAL3P32459 195 aa1.17□□□□□ -2.22
SCC2YDR180W BUD2P33314 1104 aa1.17□□□□□ -2.22
SCC2YDR180W IRS4P36115 615 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W ABZ1P37254 787 aaPredicted RBP1.17□□□□□ -2.22
SCC2YDR180W RCK2P38623 610 aa1.17□□□□□ -2.22
SCC2YDR180W PEX28P38848 579 aa1.17□□□□□ -2.22
SCC2YDR180W REV7P38927 245 aa1.17□□□□□ -2.22
SCC2YDR180W BEM4P39011 633 aa1.17□□□□□ -2.22
SCC2YDR180W HXT13P39924 564 aa1.17□□□□□ -2.22
SCC2YDR180W SAH1P39954 449 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W DLD3P39976 496 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W VID27P40157 782 aa1.17□□□□□ -2.22
SCC2YDR180W ARI1P53111 347 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W PCL10P53124 433 aa1.17□□□□□ -2.22
SCC2YDR180W HST1P53685 503 aa1.17□□□□□ -2.22
SCC2YDR180W RIA1P53893 1110 aa1.17□□□□□ -2.22
SCC2YDR180W NOP15P53927 220 aaPredicted RBP1.17□□□□□ -2.22
SCC2YDR180W RSC4Q02206 625 aa1.17□□□□□ -2.22
SCC2YDR180W VTC3Q02725 835 aa1.17□□□□□ -2.22
SCC2YDR180W VPS60Q03390 229 aa1.17□□□□□ -2.22
SCC2YDR180W COX20Q04935 205 aa1.17□□□□□ -2.22
SCC2YDR180W LCB5Q06147 687 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W THI73Q07904 523 aa1.17□□□□□ -2.22
SCC2YDR180W RRP6Q12149 733 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W YLL054CQ12244 843 aa1.17□□□□□ -2.22
SCC2YDR180W APC2Q12440 853 aa1.17□□□□□ -2.22
SCC2YDR180W SBP1P10080 294 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W NPR1P22211 790 aa1.17□□□□□ -2.22
SCC2YDR180W SEC14P24280 304 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W MRF1P30775 413 aaPredicted RBP1.17□□□□□ -2.22
SCC2YDR180W PEX6P33760 1030 aa1.17□□□□□ -2.22
SCC2YDR180W SHM1P37292 490 aaPredicted RBP1.17□□□□□ -2.22
SCC2YDR180W AIM46P38885 310 aa1.17□□□□□ -2.22
SCC2YDR180W NTA1P40354 457 aa1.17□□□□□ -2.22
SCC2YDR180W YIR042CP40586 236 aa1.17□□□□□ -2.22
SCC2YDR180W YGL176CP46945 554 aa1.17□□□□□ -2.22
SCC2YDR180W CCM1P48237 864 aaPredicted RBP1.17□□□□□ -2.22
SCC2YDR180W GCR2Q01722 534 aa1.17□□□□□ -2.22
SCC2YDR180W MAK10Q02197 733 aa1.17□□□□□ -2.22
SCC2YDR180W ROD1Q02805 837 aa1.17□□□□□ -2.22
SCC2YDR180W SYH1Q02875 849 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W YDR179W-AQ03983 463 aa1.17□□□□□ -2.22
SCC2YDR180W YPQ2Q06328 317 aa1.17□□□□□ -2.22
SCC2YDR180W SPN1Q06505 410 aaPredicted RBP1.17□□□□□ -2.22
SCC2YDR180W DIS3Q08162 1001 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W GYP1Q08484 637 aa1.17□□□□□ -2.22
SCC2YDR180W YOR289WQ12012 251 aaPredicted RBP1.17□□□□□ -2.22
SCC2YDR180W TMA7Q3E764 64 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W KAR2P16474 682 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W DLD1P32891 587 aa1.17□□□□□ -2.22
SCC2YDR180W TYS1P36421 394 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W BAP2P38084 609 aa1.17□□□□□ -2.22
SCC2YDR180W NAB3P38996 802 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
SCC2YDR180W GPP1P41277 250 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W SUM1P46676 1062 aa1.17□□□□□ -2.22
SCC2YDR180W PFD1P46988 109 aa1.17□□□□□ -2.22
SCC2YDR180W PTK2P47116 818 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W ARH1P48360 493 aa1.17□□□□□ -2.22
SCC2YDR180W PEX14P53112 341 aa1.17□□□□□ -2.22
SCC2YDR180W NUT1P53114 1132 aa1.17□□□□□ -2.22
SCC2YDR180W ERP6P53198 216 aa1.17□□□□□ -2.22
SCC2YDR180W UTP14Q04500 899 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W MET7Q08645 548 aa1.17□□□□□ -2.22
SCC2YDR180W CLP1Q08685 445 aaPredicted RBP1.17□□□□□ -2.22
SCC2YDR180W TUS1Q06412 1307 aa1.17□□□□□ -2.22
SCC2YDR180W PHR1P05066 565 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
SCC2YDR180W KRS1P15180 591 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W ADY2P25613 283 aa1.17□□□□□ -2.22
SCC2YDR180W RER2P35196 286 aa1.17□□□□□ -2.22
SCC2YDR180W SWH1P35845 1188 aa1.17□□□□□ -2.22
SCC2YDR180W PIM1P36775 1133 aa1.17□□□□□ -2.22
SCC2YDR180W MNN2P38069 597 aa1.17□□□□□ -2.22
SCC2YDR180W KTR3P38130 404 aaPredicted RBP1.17□□□□□ -2.22
SCC2YDR180W DYS1P38791 387 aa1.17□□□□□ -2.22
SCC2YDR180W RTT107P38850 1070 aa1.17□□□□□ -2.22
SCC2YDR180W GEM1P39722 662 aa1.17□□□□□ -2.22
SCC2YDR180W YTA6P40328 754 aa1.17□□□□□ -2.22
SCC2YDR180W SBE2P42223 864 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W MPP10P47083 593 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W YNL193WP53870 558 aa1.17□□□□□ -2.22
SCC2YDR180W ADE12P80210 433 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W UME1Q03010 460 aa1.17□□□□□ -2.22
SCC2YDR180W SVL3Q03088 825 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W TAF9Q05027 157 aa1.17□□□□□ -2.22
SCC2YDR180W EMG1Q06287 252 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W HDA2Q06629 674 aa1.17□□□□□ -2.22
SCC2YDR180W YDR306CQ06640 478 aa1.17□□□□□ -2.22
SCC2YDR180W CMS1Q07897 291 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W YOR296WQ08748 1289 aa1.17□□□□□ -2.22
SCC2YDR180W BUD7Q08754 746 aa1.17□□□□□ -2.22
SCC2YDR180W YPL225WQ08971 146 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W CLF1Q12309 687 aaPredicted RBP1.17□□□□□ -2.22
SCC2YDR180W FLO1P32768 1537 aa1.16□□□□□ -2.22
SCC2YDR180W HVG1P0CE11 249 aa1.16□□□□□ -2.22
SCC2YDR180W SEC23P15303 768 aaKnown RBP1.16□□□□□ -2.22
SCC2YDR180W DAL5P15365 543 aa1.16□□□□□ -2.22
SCC2YDR180W PSO2P30620 661 aa1.16□□□□□ -2.22
SCC2YDR180W LYP1P32487 611 aa1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms