RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	FOB1	O13329	566 aa		5.18	□□□□□ -1.58
SUP35	YDR172W	TUB2	P02557	457 aa	Known RBP	5.18	□□□□□ -1.58
SUP35	YDR172W	KRS1	P15180	591 aa	Known RBP	5.18	□□□□□ -1.58
SUP35	YDR172W	ISY1	P21374	235 aa	Predicted RBP	5.18	□□□□□ -1.58
SUP35	YDR172W	SPC110	P32380	944 aa		5.18	□□□□□ -1.58
SUP35	YDR172W	TPS3	P38426	1054 aa	Known RBP	5.18	□□□□□ -1.58
SUP35	YDR172W	KEL1	P38853	1164 aa	Known RBP	5.18	□□□□□ -1.58
SUP35	YDR172W	ACO2	P39533	789 aa		5.18	□□□□□ -1.58
SUP35	YDR172W	NIT1	P40447	199 aa		5.18	□□□□□ -1.58
SUP35	YDR172W	VTC2	P43585	828 aa		5.18	□□□□□ -1.58
SUP35	YDR172W	FYV8	P46949	817 aa	Known RBP	5.18	□□□□□ -1.58
SUP35	YDR172W	CAF130	P53280	1122 aa	Predicted RBP	5.18	□□□□□ -1.58
SUP35	YDR172W	CSM3	Q04659	317 aa		5.18	□□□□□ -1.58
SUP35	YDR172W	UTP4	Q06679	776 aa	Known RBP	5.18	□□□□□ -1.58
SUP35	YDR172W	VIP1	Q06685	1146 aa	Known RBP	5.18	□□□□□ -1.58
SUP35	YDR172W	CWC2	Q12046	339 aa	Predicted RBP	5.18	□□□□□ -1.58
SUP35	YDR172W	YOL098C	Q12496	1037 aa		5.18	□□□□□ -1.58
SUP35	YDR172W	YLR278C	Q05854	1341 aa		5.18	□□□□□ -1.58
SUP35	YDR172W	TUS1	Q06412	1307 aa		5.18	□□□□□ -1.58
SUP35	YDR172W	YEL076C-A	P0CX16	216 aa		5.17	□□□□□ -1.58
SUP35	YDR172W	YLR464W	P0CX17	216 aa		5.17	□□□□□ -1.58
SUP35	YDR172W	RPL8A	P17076	256 aa	Known RBP	5.17	□□□□□ -1.58
SUP35	YDR172W	SPO11	P23179	398 aa		5.17	□□□□□ -1.58
SUP35	YDR172W	SEC20	P28791	383 aa		5.17	□□□□□ -1.58
SUP35	YDR172W	STO1	P34160	861 aa	Known RBP	5.17	□□□□□ -1.58
SUP35	YDR172W	CCC2	P38995	1004 aa		5.17	□□□□□ -1.58
SUP35	YDR172W	YEL076C	P39971	216 aa		5.17	□□□□□ -1.58
SUP35	YDR172W	APT1	P49435	187 aa	Known RBP	5.17	□□□□□ -1.58
SUP35	YDR172W	HFM1	P51979	1187 aa		5.17	□□□□□ -1.58
SUP35	YDR172W	CBK1	P53894	756 aa		5.17	□□□□□ -1.58
SUP35	YDR172W	NAM8	Q00539	523 aa	Known RBP	5.17	□□□□□ -1.58
SUP35	YDR172W	VPS38	Q05919	439 aa		5.17	□□□□□ -1.58
SUP35	YDR172W	YDL176W	Q12027	708 aa		5.17	□□□□□ -1.58
SUP35	YDR172W	FKS1	P38631	1876 aa	Known RBP	5.17	□□□□□ -1.58
SUP35	YDR172W	SPO12	P17123	173 aa		5.17	□□□□□ -1.58
SUP35	YDR172W	UBC1	P21734	215 aa	Known RBP	5.17	□□□□□ -1.58
SUP35	YDR172W	PRP31	P49704	494 aa	Predicted RBP	5.17	□□□□□ -1.58
SUP35	YDR172W	LSB1	P53281	241 aa		5.17	□□□□□ -1.58
SUP35	YDR172W	UME1	Q03010	460 aa		5.17	□□□□□ -1.58
SUP35	YDR172W	YAP7	Q08182	245 aa		5.17	□□□□□ -1.58
SUP35	YDR172W	HMI1	Q12039	706 aa		5.17	□□□□□ -1.58
SUP35	YDR172W	RRP6	Q12149	733 aa	Known RBP	5.17	□□□□□ -1.58
SUP35	YDR172W	GSY1	P23337	708 aa		5.16	□□□□□ -1.58
SUP35	YDR172W	IRE1	P32361	1115 aa		5.16	□□□□□ -1.58
SUP35	YDR172W	AHP1	P38013	176 aa	Known RBP	5.16	□□□□□ -1.58
SUP35	YDR172W	PPS1	P38148	807 aa		5.16	□□□□□ -1.58
SUP35	YDR172W	HXT5	P38695	592 aa		5.16	□□□□□ -1.58
SUP35	YDR172W	GAA1	P39012	614 aa		5.16	□□□□□ -1.58
SUP35	YDR172W	VPS60	Q03390	229 aa		5.16	□□□□□ -1.58
SUP35	YDR172W	SPO75	Q07798	868 aa		5.16	□□□□□ -1.58
SUP35	YDR172W	EFM2	P38347	419 aa		5.16	□□□□□ -1.58
SUP35	YDR172W	SUL1	P38359	859 aa		5.16	□□□□□ -1.58
SUP35	YDR172W	PIH1	P38768	344 aa		5.16	□□□□□ -1.58
SUP35	YDR172W	PAN5	P38787	379 aa		5.16	□□□□□ -1.58
SUP35	YDR172W	ULP2	P40537	1034 aa	Predicted RBP	5.16	□□□□□ -1.58
SUP35	YDR172W	YIR007W	P40566	764 aa		5.16	□□□□□ -1.58
SUP35	YDR172W	ALF1	P53904	254 aa		5.16	□□□□□ -1.58
SUP35	YDR172W	YLR287C	Q05881	355 aa		5.16	□□□□□ -1.58
SUP35	YDR172W	SMC6	Q12749	1114 aa		5.16	□□□□□ -1.58
SUP35	YDR172W	ILV1	P00927	576 aa	Known RBP	5.15	□□□□□ -1.59
SUP35	YDR172W	OM45	P16547	393 aa		5.15	□□□□□ -1.59
SUP35	YDR172W	PDC6	P26263	563 aa	Known RBP	5.15	□□□□□ -1.59
SUP35	YDR172W	LTV1	P34078	463 aa		5.15	□□□□□ -1.59
SUP35	YDR172W	CAJ1	P39101	391 aa		5.15	□□□□□ -1.59
SUP35	YDR172W	TIF4631	P39935	952 aa	Known RBP	5.15	□□□□□ -1.59
SUP35	YDR172W	VFA1	P40080	203 aa		5.15	□□□□□ -1.59
SUP35	YDR172W	SHQ1	P40486	507 aa	Predicted RBP	5.15	□□□□□ -1.59
SUP35	YDR172W	UBP15	P50101	1230 aa		5.15	□□□□□ -1.59
SUP35	YDR172W	FMS1	P50264	508 aa		5.15	□□□□□ -1.59
SUP35	YDR172W	GUP1	P53154	560 aa		5.15	□□□□□ -1.59
SUP35	YDR172W	CAF120	P53836	1060 aa		5.15	□□□□□ -1.59
SUP35	YDR172W	ERG5	P54781	538 aa		5.15	□□□□□ -1.59
SUP35	YDR172W	RPL34A	P87262	121 aa	Predicted RBP	5.15	□□□□□ -1.59
SUP35	YDR172W	YLH47	Q06493	454 aa		5.15	□□□□□ -1.59
SUP35	YDR172W	PUN1	Q06991	263 aa		5.15	□□□□□ -1.59
SUP35	YDR172W	YLR001C	Q07895	862 aa		5.15	□□□□□ -1.59
SUP35	YDR172W	PPR1	P07272	904 aa	Predicted RBP	5.14	□□□□□ -1.59
SUP35	YDR172W	PET111	P08468	800 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	MTF2	P10849	440 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	CKA2	P19454	339 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	PWP2	P25635	923 aa	Known RBP	5.14	□□□□□ -1.59
SUP35	YDR172W	UBP5	P39944	805 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	ACA1	P39970	489 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	ROG3	P43602	733 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	TOS3	P43637	560 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	PGA2	P53903	129 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	BOP3	P53958	396 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	ORC4	P54791	529 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	BUL2	Q03758	920 aa	Known RBP	5.14	□□□□□ -1.59
SUP35	YDR172W	TY1A-MR1	Q04215	440 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	RRB1	Q04225	511 aa	Known RBP	5.14	□□□□□ -1.59
SUP35	YDR172W	YDL057W	Q07379	328 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	CSR2	Q12734	1121 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	CCP1	P00431	361 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
SUP35	YDR172W	TUP1	P16649	713 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	DAL7	P21826	554 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	MLF3	P32047	452 aa		5.14	□□□□□ -1.59
SUP35	YDR172W	REI1	P38344	393 aa	Predicted RBP	5.14	□□□□□ -1.59
SUP35	YDR172W	IES1	P43579	692 aa		5.14	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms