RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	SAC7	P17121	654 aa		6.63	□□□□□ -1.35
SNF11	YDR073W	YKR078W	P36158	585 aa	Known RBP	6.63	□□□□□ -1.35
SNF11	YDR073W	UGA2	P38067	497 aa		6.63	□□□□□ -1.35
SNF11	YDR073W	ACA1	P39970	489 aa		6.63	□□□□□ -1.35
SNF11	YDR073W	CCT5	P40413	562 aa	Known RBP	6.63	□□□□□ -1.35
SNF11	YDR073W	IML2	P47031	731 aa		6.63	□□□□□ -1.35
SNF11	YDR073W	YLR257W	Q06146	321 aa	Known RBP	6.63	□□□□□ -1.35
SNF11	YDR073W	YDR461C-A	Q2V2P7	80 aa		6.63	□□□□□ -1.35
SNF11	YDR073W	CDC48	P25694	835 aa	Known RBP	6.62	□□□□□ -1.35
SNF11	YDR073W	PGM2	P37012	569 aa	Known RBP	6.62	□□□□□ -1.35
SNF11	YDR073W	HSL7	P38274	827 aa		6.62	□□□□□ -1.35
SNF11	YDR073W	TSL1	P38427	1098 aa	Known RBP	6.62	□□□□□ -1.35
SNF11	YDR073W	RPN3	P40016	523 aa	Known RBP	6.62	□□□□□ -1.35
SNF11	YDR073W	YER158C	P40095	573 aa		6.62	□□□□□ -1.35
SNF11	YDR073W	GYP7	P48365	746 aa		6.62	□□□□□ -1.35
SNF11	YDR073W	PTA1	Q01329	785 aa	Predicted RBP	6.62	□□□□□ -1.35
SNF11	YDR073W	HRK1	Q08732	759 aa	Known RBP	6.62	□□□□□ -1.35
SNF11	YDR073W	SLP1	Q12232	587 aa		6.62	□□□□□ -1.35
SNF11	YDR073W	ERP4	Q12450	207 aa		6.62	□□□□□ -1.35
SNF11	YDR073W	HSC82	P15108	705 aa	Known RBP	6.61	□□□□□ -1.35
SNF11	YDR073W	ERS1	P17261	260 aa		6.61	□□□□□ -1.35
SNF11	YDR073W	HCA4	P20448	770 aa	Known RBP	6.61	□□□□□ -1.35
SNF11	YDR073W	YKU70	P32807	602 aa		6.61	□□□□□ -1.35
SNF11	YDR073W	YKL151C	P36059	337 aa		6.61	□□□□□ -1.35
SNF11	YDR073W	TED1	P40533	473 aa		6.61	□□□□□ -1.35
SNF11	YDR073W	UBC9	P50623	157 aa	Predicted RBP	6.61	□□□□□ -1.35
SNF11	YDR073W	ADE12	P80210	433 aa	Known RBP	6.61	□□□□□ -1.35
SNF11	YDR073W	YHM2	Q04013	314 aa		6.61	□□□□□ -1.35
SNF11	YDR073W	YLL058W	Q12198	575 aa		6.61	□□□□□ -1.35
SNF11	YDR073W	CCR4	P31384	837 aa	Known RBP	6.6	□□□□□ -1.35
SNF11	YDR073W	CAF120	P53836	1060 aa		6.6	□□□□□ -1.35
SNF11	YDR073W	CUZ1	P53899	274 aa		6.6	□□□□□ -1.35
SNF11	YDR073W	TY1A-MR1	Q04215	440 aa		6.6	□□□□□ -1.35
SNF11	YDR073W	YPR196W	Q06595	470 aa		6.6	□□□□□ -1.35
SNF11	YDR073W	SSP2	Q08646	371 aa		6.6	□□□□□ -1.35
SNF11	YDR073W	NEW1	Q08972	1196 aa	Known RBP	6.6	□□□□□ -1.35
SNF11	YDR073W	DAL7	P21826	554 aa		6.59	□□□□□ -1.35
SNF11	YDR073W	NNK1	P36003	928 aa		6.59	□□□□□ -1.35
SNF11	YDR073W	MAE1	P36013	669 aa	Known RBP	6.59	□□□□□ -1.35
SNF11	YDR073W	MNT3	P40549	630 aa		6.59	□□□□□ -1.35
SNF11	YDR073W	QRI7	P43122	407 aa		6.59	□□□□□ -1.35
SNF11	YDR073W	ROG3	P43602	733 aa		6.59	□□□□□ -1.35
SNF11	YDR073W	YJL045W	P47052	634 aa		6.59	□□□□□ -1.35
SNF11	YDR073W	TAD1	P53065	400 aa		6.59	□□□□□ -1.35
SNF11	YDR073W	HOS3	Q02959	697 aa	Known RBP	6.59	□□□□□ -1.35
SNF11	YDR073W	YMR018W	Q04364	514 aa		6.59	□□□□□ -1.35
SNF11	YDR073W	ECM38	Q05902	660 aa	Predicted RBP	6.59	□□□□□ -1.35
SNF11	YDR073W	MDM38	Q08179	573 aa		6.59	□□□□□ -1.35
SNF11	YDR073W	NBA1	Q08229	501 aa	Known RBP	6.59	□□□□□ -1.35
SNF11	YDR073W	YOR223W	Q12015	292 aa		6.59	□□□□□ -1.35
SNF11	YDR073W	RTP1	Q12751	981 aa		6.59	□□□□□ -1.35
SNF11	YDR073W	DIF1	O13577	133 aa		6.58	□□□□□ -1.36
SNF11	YDR073W	MSS18	P08593	268 aa		6.58	□□□□□ -1.36
SNF11	YDR073W	RFA1	P22336	621 aa	Known RBP	6.58	□□□□□ -1.36
SNF11	YDR073W	CHS3	P29465	1165 aa		6.58	□□□□□ -1.36
SNF11	YDR073W	MNN4	P36044	1178 aa		6.58	□□□□□ -1.36
SNF11	YDR073W	RLP7	P40693	322 aa	Known RBP	6.58	□□□□□ -1.36
SNF11	YDR073W	RNR4	P49723	345 aa	Known RBP	6.58	□□□□□ -1.36
SNF11	YDR073W	LYS5	P50113	272 aa		6.58	□□□□□ -1.36
SNF11	YDR073W	TNA1	P53322	534 aa		6.58	□□□□□ -1.36
SNF11	YDR073W	NOG2	P53742	486 aa	Known RBP	6.58	□□□□□ -1.36
SNF11	YDR073W	CNM67	P53865	581 aa	Known RBP	6.58	□□□□□ -1.36
SNF11	YDR073W	VPS30	Q02948	557 aa		6.58	□□□□□ -1.36
SNF11	YDR073W	DOT1	Q04089	582 aa	Known RBP	6.58	□□□□□ -1.36
SNF11	YDR073W	RPS21A	P0C0V8	87 aa	Known RBP	6.57	□□□□□ -1.36
SNF11	YDR073W	MCM10	P32354	571 aa		6.57	□□□□□ -1.36
SNF11	YDR073W	SMY2	P32909	740 aa	Known RBP	6.57	□□□□□ -1.36
SNF11	YDR073W	NMD3	P38861	518 aa	Known RBP	6.57	□□□□□ -1.36
SNF11	YDR073W	TMA108	P40462	946 aa		6.57	□□□□□ -1.36
SNF11	YDR073W	HOS4	P40480	1083 aa		6.57	□□□□□ -1.36
SNF11	YDR073W	SHR5	P41912	237 aa		6.57	□□□□□ -1.36
SNF11	YDR073W	BNA2	P47125	453 aa		6.57	□□□□□ -1.36
SNF11	YDR073W	NPY1	P53164	384 aa		6.57	□□□□□ -1.36
SNF11	YDR073W	TSR2	Q06672	205 aa	Known RBP	6.57	□□□□□ -1.36
SNF11	YDR073W	YOL087C	Q99247	1116 aa		6.57	□□□□□ -1.36
SNF11	YDR073W	MIH1	P23748	554 aa		6.56	□□□□□ -1.36
SNF11	YDR073W	SER1	P33330	395 aa	Known RBP	6.56	□□□□□ -1.36
SNF11	YDR073W	SAP190	P36123	1033 aa		6.56	□□□□□ -1.36
SNF11	YDR073W	GIC1	P38785	314 aa		6.56	□□□□□ -1.36
SNF11	YDR073W	HXT6	P39003	570 aa	Known RBP	6.56	□□□□□ -1.36
SNF11	YDR073W	HXT7	P39004	570 aa		6.56	□□□□□ -1.36
SNF11	YDR073W	BFA1	P47113	574 aa		6.56	□□□□□ -1.36
SNF11	YDR073W	GTR1	Q00582	310 aa		6.56	□□□□□ -1.36
SNF11	YDR073W	GIS4	Q04233	774 aa		6.56	□□□□□ -1.36
SNF11	YDR073W	OPY2	Q06810	360 aa		6.56	□□□□□ -1.36
SNF11	YDR073W	SYT1	Q06836	1226 aa		6.56	□□□□□ -1.36
SNF11	YDR073W	HFI1	Q12060	488 aa		6.56	□□□□□ -1.36
SNF11	YDR073W	YOL114C	Q12322	202 aa		6.56	□□□□□ -1.36
SNF11	YDR073W	SSM4	P40318	1319 aa		6.55	□□□□□ -1.36
SNF11	YDR073W	BI4	P03879	638 aa		6.55	□□□□□ -1.36
SNF11	YDR073W	MSM1	P22438	575 aa		6.55	□□□□□ -1.36
SNF11	YDR073W	NAR1	P23503	491 aa	Known RBP	6.55	□□□□□ -1.36
SNF11	YDR073W	CEM1	P39525	442 aa		6.55	□□□□□ -1.36
SNF11	YDR073W	NDE1	P40215	560 aa		6.55	□□□□□ -1.36
SNF11	YDR073W	YFL054C	P43549	646 aa		6.55	□□□□□ -1.36
SNF11	YDR073W	YFL052W	P43551	465 aa		6.55	□□□□□ -1.36
SNF11	YDR073W	HXT16	P47185	567 aa		6.55	□□□□□ -1.36
SNF11	YDR073W	SRB7	P47822	140 aa		6.55	□□□□□ -1.36
SNF11	YDR073W	YKE2	P52553	114 aa		6.55	□□□□□ -1.36
SNF11	YDR073W	HOL1	P53389	586 aa		6.55	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 133.2 ms