RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 GBA2Q9HCG7 927 aaPredicted RBP9.35□□□□□ -0.91
HERPUD1-217ENST00000569429 PRDM6Q9NQX0 595 aa9.35□□□□□ -0.91
HERPUD1-217ENST00000569429 A0A087WZG4 1122 aa9.34□□□□□ -0.91
HERPUD1-217ENST00000569429 HIRAP54198 1017 aaPredicted RBP9.34□□□□□ -0.91
HERPUD1-217ENST00000569429 PRO3102Q9H379 93 aa9.34□□□□□ -0.91
HERPUD1-217ENST00000569429 GGNBP2Q9H3C7 697 aa9.34□□□□□ -0.91
HERPUD1-217ENST00000569429 ROCK2O75116 1388 aaKnown RBP9.34□□□□□ -0.91
HERPUD1-217ENST00000569429 NPHP1O15259 732 aa9.33□□□□□ -0.92
HERPUD1-217ENST00000569429 TBC1D8O95759 1140 aa9.33□□□□□ -0.92
HERPUD1-217ENST00000569429 SETDB2Q96T68 719 aa9.33□□□□□ -0.92
HERPUD1-217ENST00000569429 WASHC2AQ641Q2 1341 aa9.32□□□□□ -0.92
HERPUD1-217ENST00000569429 CDHR2Q9BYE9 1310 aa9.32□□□□□ -0.92
HERPUD1-217ENST00000569429 ST20-MTHFSA0A0A6YYL1 179 aa9.32□□□□□ -0.92
HERPUD1-217ENST00000569429 MTHFSP49914 203 aa9.32□□□□□ -0.92
HERPUD1-217ENST00000569429 CC2D2BQ6DHV5 1058 aa9.32□□□□□ -0.92
HERPUD1-217ENST00000569429 USP48Q86UV5 1035 aa9.32□□□□□ -0.92
HERPUD1-217ENST00000569429 LARGE2Q8N3Y3 721 aa9.32□□□□□ -0.92
HERPUD1-217ENST00000569429 MPNDQ8N594 471 aa9.32□□□□□ -0.92
HERPUD1-217ENST00000569429 EMILIN1Q9Y6C2 1016 aa9.32□□□□□ -0.92
HERPUD1-217ENST00000569429 PRUNE2Q8WUY3 3088 aa9.32□□□□□ -0.92
HERPUD1-217ENST00000569429 PIEZO1Q92508 2521 aa9.31□□□□□ -0.92
HERPUD1-217ENST00000569429 FKTNO75072 461 aa9.31□□□□□ -0.92
HERPUD1-217ENST00000569429 CANXP27824 592 aaKnown RBP9.31□□□□□ -0.92
HERPUD1-217ENST00000569429 ALDH1B1P30837 517 aa9.31□□□□□ -0.92
HERPUD1-217ENST00000569429 GRIPAP1Q4V328 841 aa9.31□□□□□ -0.92
HERPUD1-217ENST00000569429 PLEKHO1Q53GL0 409 aaPredicted RBP9.31□□□□□ -0.92
HERPUD1-217ENST00000569429 RASAL3Q86YV0 1011 aa9.31□□□□□ -0.92
HERPUD1-217ENST00000569429 VSIG10Q8N0Z9 540 aa9.31□□□□□ -0.92
HERPUD1-217ENST00000569429 PIAS4Q8N2W9 510 aaPredicted RBP9.31□□□□□ -0.92
HERPUD1-217ENST00000569429 ARMC5Q96C12 935 aa9.31□□□□□ -0.92
HERPUD1-217ENST00000569429 CFHR5Q9BXR6 569 aa9.31□□□□□ -0.92
HERPUD1-217ENST00000569429 LAMB4A4D0S4 1761 aa9.31□□□□□ -0.92
HERPUD1-217ENST00000569429 NPC1L1Q9UHC9 1359 aa9.3□□□□□ -0.92
HERPUD1-217ENST00000569429 A0A1W2PPC1 479 aa9.3□□□□□ -0.92
HERPUD1-217ENST00000569429 GMPSP49915 693 aaPredicted RBP9.3□□□□□ -0.92
HERPUD1-217ENST00000569429 AMOTQ4VCS5 1084 aa9.3□□□□□ -0.92
HERPUD1-217ENST00000569429 ZNF530Q6P9A1 599 aaPredicted RBP9.3□□□□□ -0.92
HERPUD1-217ENST00000569429 NIM1KQ8IY84 436 aa9.3□□□□□ -0.92
HERPUD1-217ENST00000569429 TRPM4Q8TD43 1214 aa9.3□□□□□ -0.92
HERPUD1-217ENST00000569429 STXBP5LQ9Y2K9 1186 aa9.3□□□□□ -0.92
HERPUD1-217ENST00000569429 UBR2Q8IWV8 1755 aa9.29□□□□□ -0.92
HERPUD1-217ENST00000569429 TM4SF4P48230 202 aa9.29□□□□□ -0.92
HERPUD1-217ENST00000569429 CXCL9Q07325 125 aa9.29□□□□□ -0.92
HERPUD1-217ENST00000569429 GPR153Q6NV75 609 aa9.29□□□□□ -0.92
HERPUD1-217ENST00000569429 DLK2Q6UY11 383 aa9.29□□□□□ -0.92
HERPUD1-217ENST00000569429 ANKRD13DQ6ZTN6 518 aa9.29□□□□□ -0.92
HERPUD1-217ENST00000569429 EYSQ5T1H1 3165 aa9.28□□□□□ -0.92
HERPUD1-217ENST00000569429 MRC1P22897 1456 aa9.28□□□□□ -0.92
HERPUD1-217ENST00000569429 COL9A1P20849 921 aa9.28□□□□□ -0.92
HERPUD1-217ENST00000569429 KRT26Q7Z3Y9 468 aa9.28□□□□□ -0.92
HERPUD1-217ENST00000569429 TMEM106CQ9BVX2 250 aa9.28□□□□□ -0.92
HERPUD1-217ENST00000569429 VPS33BQ9H267 617 aa9.28□□□□□ -0.92
HERPUD1-217ENST00000569429 TBC1D2BQ9UPU7 963 aa9.28□□□□□ -0.92
HERPUD1-217ENST00000569429 TRIM17Q9Y577 477 aa9.28□□□□□ -0.92
HERPUD1-217ENST00000569429 LAMA2P24043 3122 aaKnown RBP9.28□□□□□ -0.92
HERPUD1-217ENST00000569429 ERBB4Q15303 1308 aa9.28□□□□□ -0.92
HERPUD1-217ENST00000569429 KDM3BQ7LBC6 1761 aa9.27□□□□□ -0.92
HERPUD1-217ENST00000569429 SOX1O00570 391 aaPredicted RBP9.27□□□□□ -0.93
HERPUD1-217ENST00000569429 PPM1GO15355 546 aaPredicted RBP9.27□□□□□ -0.93
HERPUD1-217ENST00000569429 C1orf141Q5JVX7 400 aa9.27□□□□□ -0.93
HERPUD1-217ENST00000569429 OTOP1Q7RTM1 612 aa9.27□□□□□ -0.93
HERPUD1-217ENST00000569429 NBPF5PQ86XG9 351 aaPredicted RBP9.27□□□□□ -0.93
HERPUD1-217ENST00000569429 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.27□□□□□ -0.93
HERPUD1-217ENST00000569429 ZNRF3Q9ULT6 936 aa9.27□□□□□ -0.93
HERPUD1-217ENST00000569429 PTPN22Q9Y2R2 807 aa9.27□□□□□ -0.93
HERPUD1-217ENST00000569429 H7C1D1 291 aa9.26□□□□□ -0.93
HERPUD1-217ENST00000569429 CAMTA2O94983 1202 aa9.26□□□□□ -0.93
HERPUD1-217ENST00000569429 STARD3NLO95772 234 aa9.26□□□□□ -0.93
HERPUD1-217ENST00000569429 PLA2G5P39877 138 aa9.26□□□□□ -0.93
HERPUD1-217ENST00000569429 IL6STP40189 918 aaPredicted RBP9.26□□□□□ -0.93
HERPUD1-217ENST00000569429 LRCH3Q96II8 777 aa9.26□□□□□ -0.93
HERPUD1-217ENST00000569429 BCL2L13Q9BXK5 485 aa9.26□□□□□ -0.93
HERPUD1-217ENST00000569429 CNOT7Q9UIV1 285 aaKnown RBP9.26□□□□□ -0.93
HERPUD1-217ENST00000569429 CACNA1AO00555 2505 aa9.25□□□□□ -0.93
HERPUD1-217ENST00000569429 PPIP5K2O43314 1243 aa9.25□□□□□ -0.93
HERPUD1-217ENST00000569429 FKBP1BP68106 108 aa9.25□□□□□ -0.93
HERPUD1-217ENST00000569429 SLC39A6Q13433 755 aa9.25□□□□□ -0.93
HERPUD1-217ENST00000569429 EIF4A2Q14240 407 aaKnown RBP9.25□□□□□ -0.93
HERPUD1-217ENST00000569429 TPTE2Q6XPS3 522 aa9.25□□□□□ -0.93
HERPUD1-217ENST00000569429 L3MBTL2Q969R5 705 aa9.25□□□□□ -0.93
HERPUD1-217ENST00000569429 R3HDMLQ9H3Y0 253 aa9.25□□□□□ -0.93
HERPUD1-217ENST00000569429 SLC52A2Q9HAB3 445 aa9.25□□□□□ -0.93
HERPUD1-217ENST00000569429 ADM5C9JUS6 153 aa9.24□□□□□ -0.93
HERPUD1-217ENST00000569429 HOXD11P31277 338 aaPredicted RBP9.24□□□□□ -0.93
HERPUD1-217ENST00000569429 TNIP1Q15025 636 aa9.24□□□□□ -0.93
HERPUD1-217ENST00000569429 CRY2Q49AN0 593 aa9.24□□□□□ -0.93
HERPUD1-217ENST00000569429 CLEC4GQ6UXB4 293 aa9.24□□□□□ -0.93
HERPUD1-217ENST00000569429 DCPSQ96C86 337 aaKnown RBP9.24□□□□□ -0.93
HERPUD1-217ENST00000569429 ZNF333Q96JL9 665 aa9.24□□□□□ -0.93
HERPUD1-217ENST00000569429 SHTN1A0MZ66 631 aa9.23□□□□□ -0.93
HERPUD1-217ENST00000569429 AOC3Q16853 763 aa9.23□□□□□ -0.93
HERPUD1-217ENST00000569429 MICALL2Q8IY33 904 aa9.23□□□□□ -0.93
HERPUD1-217ENST00000569429 DEFB123Q8N688 67 aa9.23□□□□□ -0.93
HERPUD1-217ENST00000569429 DPF3Q92784 378 aa9.23□□□□□ -0.93
HERPUD1-217ENST00000569429 TAF1P21675 1872 aa9.22□□□□□ -0.93
HERPUD1-217ENST00000569429 SREBF2Q12772 1141 aa9.22□□□□□ -0.93
HERPUD1-217ENST00000569429 SAMD7Q7Z3H4 446 aa9.22□□□□□ -0.93
HERPUD1-217ENST00000569429 DPF2Q92785 391 aa9.22□□□□□ -0.93
HERPUD1-217ENST00000569429 LAMB1P07942 1786 aa9.22□□□□□ -0.93
HERPUD1-217ENST00000569429 ZNF646O15015 1829 aaPredicted RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms