RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ZSWIM4Q9H7M6 989 aa22.44■■□□□ 1.18
SUDS3-204ENST00000543473 MAST1Q9Y2H9 1570 aa22.44■■□□□ 1.18
SUDS3-204ENST00000543473 MCM3P25205 808 aa22.44■■□□□ 1.18
SUDS3-204ENST00000543473 TANGO6Q9C0B7 1094 aa22.44■■□□□ 1.18
SUDS3-204ENST00000543473 DMRT2Q9Y5R5 561 aa22.44■■□□□ 1.18
SUDS3-204ENST00000543473 TCEANC2Q96MN5 208 aa22.43■■□□□ 1.18
SUDS3-204ENST00000543473 POLKQ9UBT6 870 aa22.43■■□□□ 1.18
SUDS3-204ENST00000543473 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.43■■□□□ 1.18
SUDS3-204ENST00000543473 KCNA6P17658 529 aa22.43■■□□□ 1.18
SUDS3-204ENST00000543473 ISM2Q6H9L7 571 aa22.43■■□□□ 1.18
SUDS3-204ENST00000543473 MYRIPQ8NFW9 859 aa22.43■■□□□ 1.18
SUDS3-204ENST00000543473 SMARCC1Q92922 1105 aaPredicted RBP22.43■■□□□ 1.18
SUDS3-204ENST00000543473 UBAC1Q9BSL1 405 aa22.43■■□□□ 1.18
SUDS3-204ENST00000543473 TMOD3Q9NYL9 352 aa22.43■■□□□ 1.18
SUDS3-204ENST00000543473 NCKAP5LQ9HCH0 1330 aa22.43■■□□□ 1.18
SUDS3-204ENST00000543473 TSPYL6Q8N831 410 aa22.42■■□□□ 1.18
SUDS3-204ENST00000543473 ANKRD24Q8TF21 1146 aa22.42■■□□□ 1.18
SUDS3-204ENST00000543473 ARFGAP3Q9NP61 516 aa22.42■■□□□ 1.18
SUDS3-204ENST00000543473 HMG20BQ9P0W2 317 aa22.42■■□□□ 1.18
SUDS3-204ENST00000543473 LARP1Q6PKG0 1096 aaKnown RBP22.42■■□□□ 1.18
SUDS3-204ENST00000543473 PIBF1Q8WXW3 757 aa22.42■■□□□ 1.18
SUDS3-204ENST00000543473 GOLGA6L7A0A1B0GV03 622 aa22.42■■□□□ 1.18
SUDS3-204ENST00000543473 CEP85Q6P2H3 762 aa22.42■■□□□ 1.18
SUDS3-204ENST00000543473 YTHDC2Q9H6S0 1430 aaKnown RBP22.42■■□□□ 1.18
SUDS3-204ENST00000543473 CCDC12Q8WUD4 166 aaPredicted RBP22.41■■□□□ 1.18
SUDS3-204ENST00000543473 RAI14Q9P0K7 980 aa22.41■■□□□ 1.18
SUDS3-204ENST00000543473 ZBTB7BO15156 539 aaPredicted RBP22.41■■□□□ 1.18
SUDS3-204ENST00000543473 INSRP06213 1382 aa22.41■■□□□ 1.18
SUDS3-204ENST00000543473 PPFIA3O75145 1194 aa22.41■■□□□ 1.18
SUDS3-204ENST00000543473 STARD3NLO95772 234 aa22.41■■□□□ 1.18
SUDS3-204ENST00000543473 ABCA8O94911 1581 aa22.41■■□□□ 1.18
SUDS3-204ENST00000543473 POLR3DP05423 398 aaPredicted RBP22.41■■□□□ 1.18
SUDS3-204ENST00000543473 LMBRD1Q9NUN5 540 aa22.41■■□□□ 1.18
SUDS3-204ENST00000543473 NPHP3Q7Z494 1330 aa22.4■■□□□ 1.18
SUDS3-204ENST00000543473 IDH1O75874 414 aaKnown RBP22.4■■□□□ 1.18
SUDS3-204ENST00000543473 FAM107BQ9H098 131 aa22.4■■□□□ 1.18
SUDS3-204ENST00000543473 TDO2P48775 406 aa22.4■■□□□ 1.18
SUDS3-204ENST00000543473 AK2P54819 239 aa22.4■■□□□ 1.18
SUDS3-204ENST00000543473 TCEAL9Q9UHQ7 104 aa22.4■■□□□ 1.18
SUDS3-204ENST00000543473 UHRF1BP1Q6BDS2 1440 aa22.4■■□□□ 1.18
SUDS3-204ENST00000543473 KIF20AO95235 890 aa22.4■■□□□ 1.18
SUDS3-204ENST00000543473 CCDC85AQ96PX6 553 aaPredicted RBP22.4■■□□□ 1.18
SUDS3-204ENST00000543473 GOLGA8BA8MQT2 603 aa22.39■■□□□ 1.18
SUDS3-204ENST00000543473 IFIT1P09914 478 aaKnown RBP22.39■■□□□ 1.18
SUDS3-204ENST00000543473 MBD5Q9P267 1494 aa22.39■■□□□ 1.17
SUDS3-204ENST00000543473 HSPA2P54652 639 aa22.39■■□□□ 1.17
SUDS3-204ENST00000543473 BRF1Q92994 677 aa22.39■■□□□ 1.17
SUDS3-204ENST00000543473 RBM8AQ9Y5S9 174 aaKnown RBP22.39■■□□□ 1.17
SUDS3-204ENST00000543473 MSH6P52701 1360 aa22.39■■□□□ 1.17
SUDS3-204ENST00000543473 LUZP1Q86V48 1076 aa22.39■■□□□ 1.17
SUDS3-204ENST00000543473 BLMP54132 1417 aaPredicted RBP22.39■■□□□ 1.17
SUDS3-204ENST00000543473 KLHL34Q8N239 644 aa22.39■■□□□ 1.17
SUDS3-204ENST00000543473 TBX22Q9Y458 520 aa22.39■■□□□ 1.17
SUDS3-204ENST00000543473 COL17A1Q9UMD9 1497 aaPredicted RBP22.38■■□□□ 1.17
SUDS3-204ENST00000543473 SYT1P21579 422 aa22.38■■□□□ 1.17
SUDS3-204ENST00000543473 UBASH3AP57075 661 aa22.38■■□□□ 1.17
SUDS3-204ENST00000543473 ATP8B2P98198 1209 aa22.38■■□□□ 1.17
SUDS3-204ENST00000543473 AOPEPQ8N6M6 819 aa22.38■■□□□ 1.17
SUDS3-204ENST00000543473 GIMAP7Q8NHV1 300 aa22.38■■□□□ 1.17
SUDS3-204ENST00000543473 DBF4Q9UBU7 674 aaPredicted RBP22.38■■□□□ 1.17
SUDS3-204ENST00000543473 A0A1W2PP64 1363 aa22.38■■□□□ 1.17
SUDS3-204ENST00000543473 SPA17Q15506 151 aa22.38■■□□□ 1.17
SUDS3-204ENST00000543473 PLCD4Q9BRC7 762 aa22.38■■□□□ 1.17
SUDS3-204ENST00000543473 PPP1R9BQ96SB3 815 aa22.37■■□□□ 1.17
SUDS3-204ENST00000543473 MPHOSPH8Q99549 860 aa22.37■■□□□ 1.17
SUDS3-204ENST00000543473 ORC3Q9UBD5 711 aaPredicted RBP22.37■■□□□ 1.17
SUDS3-204ENST00000543473 PI4KAP2A4QPH2 592 aa22.37■■□□□ 1.17
SUDS3-204ENST00000543473 KRT18P05783 430 aaKnown RBP22.37■■□□□ 1.17
SUDS3-204ENST00000543473 PI4KAP1Q8N8J0 262 aa22.37■■□□□ 1.17
SUDS3-204ENST00000543473 CCDC43Q96MW1 224 aaKnown RBP22.37■■□□□ 1.17
SUDS3-204ENST00000543473 NUP88Q99567 741 aaPredicted RBP22.37■■□□□ 1.17
SUDS3-204ENST00000543473 ZFYVE27Q5T4F4 411 aa22.37■■□□□ 1.17
SUDS3-204ENST00000543473 RIOK3O14730 519 aaKnown RBP22.37■■□□□ 1.17
SUDS3-204ENST00000543473 EIF4A2Q14240 407 aaKnown RBP22.37■■□□□ 1.17
SUDS3-204ENST00000543473 TUBB4AP04350 444 aa22.36■■□□□ 1.17
SUDS3-204ENST00000543473 C17orf53Q8N3J3 647 aaPredicted RBP22.36■■□□□ 1.17
SUDS3-204ENST00000543473 ZFP91Q96JP5 570 aaPredicted RBP22.36■■□□□ 1.17
SUDS3-204ENST00000543473 USP16Q9Y5T5 823 aa22.36■■□□□ 1.17
SUDS3-204ENST00000543473 NEO1Q92859 1461 aa22.36■■□□□ 1.17
SUDS3-204ENST00000543473 CHMLP26374 656 aa22.36■■□□□ 1.17
SUDS3-204ENST00000543473 AIDAQ96BJ3 306 aa22.36■■□□□ 1.17
SUDS3-204ENST00000543473 SRRTQ9BXP5 876 aaKnown RBP22.36■■□□□ 1.17
SUDS3-204ENST00000543473 FSD2A1L4K1 749 aa22.36■■□□□ 1.17
SUDS3-204ENST00000543473 CCDC102BQ68D86 513 aa22.36■■□□□ 1.17
SUDS3-204ENST00000543473 GAS2L3Q86XJ1 694 aa22.36■■□□□ 1.17
SUDS3-204ENST00000543473 IFNL2Q8IZJ0 200 aa22.36■■□□□ 1.17
SUDS3-204ENST00000543473 DHX37Q8IY37 1157 aaKnown RBP22.35■■□□□ 1.17
SUDS3-204ENST00000543473 NPATQ14207 1427 aa22.35■■□□□ 1.17
SUDS3-204ENST00000543473 PHF23Q9BUL5 403 aaPredicted RBP22.35■■□□□ 1.17
SUDS3-204ENST00000543473 MCM6Q14566 821 aa22.35■■□□□ 1.17
SUDS3-204ENST00000543473 TAX1BP1Q86VP1 789 aa22.35■■□□□ 1.17
SUDS3-204ENST00000543473 MRPS27Q92552 414 aaKnown RBP22.35■■□□□ 1.17
SUDS3-204ENST00000543473 TAF4BQ92750 862 aa22.35■■□□□ 1.17
SUDS3-204ENST00000543473 MYD88Q99836 296 aa22.35■■□□□ 1.17
SUDS3-204ENST00000543473 PIK3R4Q99570 1358 aa22.35■■□□□ 1.17
SUDS3-204ENST00000543473 ABCC1P33527 1531 aa22.35■■□□□ 1.17
SUDS3-204ENST00000543473 U2AF2P26368 475 aaKnown RBP eCLIP22.34■■□□□ 1.171e-6■■■□□ 15.1
SUDS3-204ENST00000543473 ZNF213O14771 459 aa22.34■■□□□ 1.17
SUDS3-204ENST00000543473 TMEM63CQ9P1W3 806 aa22.34■■□□□ 1.17
SUDS3-204ENST00000543473 YEATS4O95619 227 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 515 ms