RNA–Protein interactions for RNA: ENST00000340994.4

PKHD1-201, Transcript of PKHD1, fibrocystin/polyductin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PKHD1, Length 11,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1-201ENST00000340994 KIAA1524Q8TCG1 905 aa9.4□□□□□ -0.9
PKHD1-201ENST00000340994 ARHGAP5Q13017 1502 aa9.4□□□□□ -0.91
PKHD1-201ENST00000340994 AP1ARQ63HQ0 302 aa9.4□□□□□ -0.91
PKHD1-201ENST00000340994 TBC1D5Q92609 795 aa9.4□□□□□ -0.91
PKHD1-201ENST00000340994 RAB3IL1Q8TBN0 382 aa9.39□□□□□ -0.91
PKHD1-201ENST00000340994 KIF1BPQ96EK5 621 aa9.39□□□□□ -0.91
PKHD1-201ENST00000340994 CWC27Q6UX04 472 aaKnown RBP9.39□□□□□ -0.91
PKHD1-201ENST00000340994 SNX21Q969T3 373 aa9.39□□□□□ -0.91
PKHD1-201ENST00000340994 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.39□□□□□ -0.91
PKHD1-201ENST00000340994 ATP6V1AP38606 617 aa9.39□□□□□ -0.91
PKHD1-201ENST00000340994 PCK1P35558 622 aa9.39□□□□□ -0.91
PKHD1-201ENST00000340994 IRX4P78413 519 aa9.39□□□□□ -0.91
PKHD1-201ENST00000340994 PPP4R3AQ6IN85 833 aa9.39□□□□□ -0.91
PKHD1-201ENST00000340994 KLHL10Q6JEL2 608 aa9.39□□□□□ -0.91
PKHD1-201ENST00000340994 USP37Q86T82 979 aa9.39□□□□□ -0.91
PKHD1-201ENST00000340994 MTRF1LQ9UGC7 380 aaKnown RBP9.39□□□□□ -0.91
PKHD1-201ENST00000340994 MYO1BO43795 1136 aa9.39□□□□□ -0.91
PKHD1-201ENST00000340994 MAP7D1Q3KQU3 841 aa9.39□□□□□ -0.91
PKHD1-201ENST00000340994 CCDC102BQ68D86 513 aa9.39□□□□□ -0.91
PKHD1-201ENST00000340994 KRBA2Q6ZNG9 492 aa9.39□□□□□ -0.91
PKHD1-201ENST00000340994 HDAC9Q9UKV0 1011 aa9.39□□□□□ -0.91
PKHD1-201ENST00000340994 RAPGEF4Q8WZA2 1011 aa9.39□□□□□ -0.91
PKHD1-201ENST00000340994 RASSF2P50749 326 aa9.39□□□□□ -0.91
PKHD1-201ENST00000340994 NDC80O14777 642 aa9.38□□□□□ -0.91
PKHD1-201ENST00000340994 AEBP2Q6ZN18 517 aaPredicted RBP9.38□□□□□ -0.91
PKHD1-201ENST00000340994 ELP1O95163 1332 aa9.38□□□□□ -0.91
PKHD1-201ENST00000340994 TNNC1P63316 161 aa9.38□□□□□ -0.91
PKHD1-201ENST00000340994 MYRIPQ8NFW9 859 aa9.38□□□□□ -0.91
PKHD1-201ENST00000340994 CNGA1P29973 690 aa9.38□□□□□ -0.91
PKHD1-201ENST00000340994 UBASH3AP57075 661 aa9.38□□□□□ -0.91
PKHD1-201ENST00000340994 FYB2Q5VWT5 728 aa9.38□□□□□ -0.91
PKHD1-201ENST00000340994 CKAP2LQ8IYA6 745 aa9.38□□□□□ -0.91
PKHD1-201ENST00000340994 RPUSD2Q8IZ73 545 aaKnown RBP9.38□□□□□ -0.91
PKHD1-201ENST00000340994 CUL7Q14999 1698 aa9.38□□□□□ -0.91
PKHD1-201ENST00000340994 NCAPD3P42695 1498 aa9.38□□□□□ -0.91
PKHD1-201ENST00000340994 MTHFSP49914 203 aa9.38□□□□□ -0.91
PKHD1-201ENST00000340994 SYT1P21579 422 aa9.38□□□□□ -0.91
PKHD1-201ENST00000340994 SSFA2P28290 1259 aa9.38□□□□□ -0.91
PKHD1-201ENST00000340994 PPFIA1Q13136 1202 aa9.38□□□□□ -0.91
PKHD1-201ENST00000340994 CNGA4Q8IV77 575 aa9.38□□□□□ -0.91
PKHD1-201ENST00000340994 RNF41Q9H4P4 317 aaPredicted RBP9.38□□□□□ -0.91
PKHD1-201ENST00000340994 NECTIN2Q92692 538 aa9.38□□□□□ -0.91
PKHD1-201ENST00000340994 ATL3Q6DD88 541 aa9.38□□□□□ -0.91
PKHD1-201ENST00000340994 MINK1Q8N4C8 1332 aaPredicted RBP9.38□□□□□ -0.91
PKHD1-201ENST00000340994 MTIF2P46199 727 aaKnown RBP9.38□□□□□ -0.91
PKHD1-201ENST00000340994 TRPC3Q13507 836 aa9.38□□□□□ -0.91
PKHD1-201ENST00000340994 EXOSC9Q06265 439 aaKnown RBP9.37□□□□□ -0.91
PKHD1-201ENST00000340994 CCDC14Q49A88 953 aa9.37□□□□□ -0.91
PKHD1-201ENST00000340994 CCDC40Q4G0X9 1142 aa9.37□□□□□ -0.91
PKHD1-201ENST00000340994 INTS8Q75QN2 995 aaKnown RBP9.37□□□□□ -0.91
PKHD1-201ENST00000340994 ZFP91Q96JP5 570 aaPredicted RBP9.37□□□□□ -0.91
PKHD1-201ENST00000340994 HMGB2P26583 209 aaKnown RBP9.37□□□□□ -0.91
PKHD1-201ENST00000340994 VCX3AQ9NNX9 186 aa9.37□□□□□ -0.91
PKHD1-201ENST00000340994 THEGQ9P2T0 379 aa9.37□□□□□ -0.91
PKHD1-201ENST00000340994 MAP3K21Q5TCX8 1036 aa9.37□□□□□ -0.91
PKHD1-201ENST00000340994 CDCA7LQ96GN5 454 aa9.37□□□□□ -0.91
PKHD1-201ENST00000340994 BCAP29Q9UHQ4 241 aa9.37□□□□□ -0.91
PKHD1-201ENST00000340994 PPFIA2O75334 1257 aa9.37□□□□□ -0.91
PKHD1-201ENST00000340994 SF3B2Q13435 895 aaKnown RBP9.37□□□□□ -0.91
PKHD1-201ENST00000340994 DNAI1Q9UI46 699 aa9.37□□□□□ -0.91
PKHD1-201ENST00000340994 HCLS1P14317 486 aaPredicted RBP9.37□□□□□ -0.91
PKHD1-201ENST00000340994 NKIRAS1Q9NYS0 192 aa9.37□□□□□ -0.91
PKHD1-201ENST00000340994 MACROD2A1Z1Q3 448 aa9.37□□□□□ -0.91
PKHD1-201ENST00000340994 AKR1B10O60218 316 aa9.37□□□□□ -0.91
PKHD1-201ENST00000340994 SSBP05455 408 aaKnown RBP eCLIP9.37□□□□□ -0.91
PKHD1-201ENST00000340994 ARID4AP29374 1257 aaPredicted RBP9.37□□□□□ -0.91
PKHD1-201ENST00000340994 EHMT1Q9H9B1 1298 aa9.37□□□□□ -0.91
PKHD1-201ENST00000340994 SRGAP3O43295 1099 aa9.37□□□□□ -0.91
PKHD1-201ENST00000340994 CFAP58Q5T655 872 aa9.37□□□□□ -0.91
PKHD1-201ENST00000340994 HDGFL1Q5TGJ6 251 aa9.37□□□□□ -0.91
PKHD1-201ENST00000340994 PABPN1LA6NDY0 278 aaKnown RBP9.36□□□□□ -0.91
PKHD1-201ENST00000340994 GMNNO75496 209 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 SLC4A2P04920 1241 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 C1orf115Q9H7X2 142 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 SPATS2LQ9NUQ6 558 aaKnown RBP9.36□□□□□ -0.91
PKHD1-201ENST00000340994 RAD50Q92878 1312 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 RAB3IPQ96QF0 476 aaPredicted RBP9.36□□□□□ -0.91
PKHD1-201ENST00000340994 TCP11L1Q9NUJ3 509 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 CALML4Q96GE6 196 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 HMOX1P09601 288 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 KIF5AQ12840 1032 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 TRIM14Q14142 442 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 NSD2O96028 1365 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 EVA1CP58658 441 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 ZMAT2Q96NC0 199 aaKnown RBP9.36□□□□□ -0.91
PKHD1-201ENST00000340994 PRKAR2BP31323 418 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 PLEKHO1Q53GL0 409 aaPredicted RBP9.36□□□□□ -0.91
PKHD1-201ENST00000340994 CCDC62Q6P9F0 684 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 RPGRIP1Q96KN7 1286 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 PRC1O43663 620 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 ZSCAN22P10073 491 aaPredicted RBP9.36□□□□□ -0.91
PKHD1-201ENST00000340994 MLECQ14165 292 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 PTPRCP08575 1304 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 SLFN5Q08AF3 891 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 TAOK1Q7L7X3 1001 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 GBP7Q8N8V2 638 aaPredicted RBP9.36□□□□□ -0.91
PKHD1-201ENST00000340994 N4BP3O15049 544 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 PIBF1Q8WXW3 757 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 PLCB1Q9NQ66 1216 aa9.36□□□□□ -0.91
PKHD1-201ENST00000340994 NDUFAB1O14561 156 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms