RNA–Protein interactions for RNA: ENST00000340994.4

PKHD1-201, Transcript of PKHD1, fibrocystin/polyductin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PKHD1, Length 11,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1-201ENST00000340994 PELP1Q8IZL8 1130 aaKnown RBP13.73□□□□□ -0.21
PKHD1-201ENST00000340994 MYT1Q01538 1121 aa13.52□□□□□ -0.24
PKHD1-201ENST00000340994 CCER1Q8TC90 406 aaPredicted RBP12.99□□□□□ -0.33
PKHD1-201ENST00000340994 CENPBP07199 599 aaPredicted RBP12.89□□□□□ -0.35
PKHD1-201ENST00000340994 ERICH6Q7L0X2 663 aa12.86□□□□□ -0.35
PKHD1-201ENST00000340994 DCAF8L2P0C7V8 631 aa12.78□□□□□ -0.36
PKHD1-201ENST00000340994 ZEB1P37275 1124 aaPredicted RBP12.76□□□□□ -0.37
PKHD1-201ENST00000340994 YTHDC1Q96MU7 727 aaKnown RBP12.63□□□□□ -0.39
PKHD1-201ENST00000340994 SUPT5HO00267 1087 aaKnown RBP12.59□□□□□ -0.39
PKHD1-201ENST00000340994 APLP2Q06481 763 aa12.56□□□□□ -0.4
PKHD1-201ENST00000340994 TTBK1Q5TCY1 1321 aaPredicted RBP12.53□□□□□ -0.4
PKHD1-201ENST00000340994 NEFLP07196 543 aa12.51□□□□□ -0.41
PKHD1-201ENST00000340994 NISCHQ9Y2I1 1504 aa12.49□□□□□ -0.41
PKHD1-201ENST00000340994 PCGF6Q9BYE7 350 aa12.36□□□□□ -0.43
PKHD1-201ENST00000340994 FAM9AQ8IZU1 332 aaPredicted RBP12.27□□□□□ -0.44
PKHD1-201ENST00000340994 DAXXQ9UER7 740 aaPredicted RBP12.24□□□□□ -0.45
PKHD1-201ENST00000340994 SHROOM4Q9ULL8 1493 aa12.17□□□□□ -0.46
PKHD1-201ENST00000340994 RTL5Q5HYW3 569 aaPredicted RBP12.1□□□□□ -0.47
PKHD1-201ENST00000340994 EHMT2Q96KQ7 1210 aa12.01□□□□□ -0.49
PKHD1-201ENST00000340994 HRCP23327 699 aa11.99□□□□□ -0.49
PKHD1-201ENST00000340994 TRIM26Q12899 539 aaPredicted RBP11.95□□□□□ -0.5
PKHD1-201ENST00000340994 ZNF316A6NFI3 1004 aaPredicted RBP11.93□□□□□ -0.5
PKHD1-201ENST00000340994 GLIPR1L2Q4G1C9 344 aa11.84□□□□□ -0.51
PKHD1-201ENST00000340994 TRIM41Q8WV44 630 aa11.84□□□□□ -0.51
PKHD1-201ENST00000340994 MYT1LQ9UL68 1186 aa11.83□□□□□ -0.52
PKHD1-201ENST00000340994 CLSPNQ9HAW4 1339 aa11.82□□□□□ -0.52
PKHD1-201ENST00000340994 UBTFP17480 764 aaKnown RBP11.71□□□□□ -0.53
PKHD1-201ENST00000340994 DIEXFQ68CQ4 756 aaKnown RBP11.67□□□□□ -0.54
PKHD1-201ENST00000340994 CDK11AQ9UQ88 783 aaPredicted RBP11.63□□□□□ -0.55
PKHD1-201ENST00000340994 ANP32AP39687 249 aaKnown RBP11.57□□□□□ -0.56
PKHD1-201ENST00000340994 ANP32BQ92688 251 aaKnown RBP11.54□□□□□ -0.56
PKHD1-201ENST00000340994 GTF3C3Q9Y5Q9 886 aa11.54□□□□□ -0.56
PKHD1-201ENST00000340994 ATP1B4Q9UN42 357 aaPredicted RBP11.54□□□□□ -0.56
PKHD1-201ENST00000340994 RANGAP1P46060 587 aaPredicted RBP11.49□□□□□ -0.57
PKHD1-201ENST00000340994 EIF5BO60841 1220 aaKnown RBP11.44□□□□□ -0.58
PKHD1-201ENST00000340994 ACIN1Q9UKV3 1341 aaKnown RBP11.43□□□□□ -0.58
PKHD1-201ENST00000340994 ZBTB47Q9UFB7 747 aaPredicted RBP11.41□□□□□ -0.58
PKHD1-201ENST00000340994 ANP32CO43423 234 aa11.4□□□□□ -0.58
PKHD1-201ENST00000340994 POLR3GLQ9BT43 218 aa11.36□□□□□ -0.59
PKHD1-201ENST00000340994 PPARGC1BQ86YN6 1023 aaKnown RBP11.31□□□□□ -0.6
PKHD1-201ENST00000340994 TNNT2P45379 298 aaPredicted RBP11.31□□□□□ -0.6
PKHD1-201ENST00000340994 UPF2Q9HAU5 1272 aaKnown RBP11.29□□□□□ -0.6
PKHD1-201ENST00000340994 BCANQ96GW7 911 aa11.28□□□□□ -0.6
PKHD1-201ENST00000340994 HNRNPUL2Q1KMD3 747 aaKnown RBP11.27□□□□□ -0.6
PKHD1-201ENST00000340994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.27□□□□□ -0.61
PKHD1-201ENST00000340994 ANP32EQ9BTT0 268 aa11.26□□□□□ -0.61
PKHD1-201ENST00000340994 CANXP27824 592 aaKnown RBP11.25□□□□□ -0.61
PKHD1-201ENST00000340994 ITGAEP38570 1179 aa11.23□□□□□ -0.61
PKHD1-201ENST00000340994 CHIC1Q5VXU3 224 aa11.23□□□□□ -0.61
PKHD1-201ENST00000340994 NEFMP07197 916 aa11.23□□□□□ -0.61
PKHD1-201ENST00000340994 HSP90AA1P07900 732 aaKnown RBP11.22□□□□□ -0.61
PKHD1-201ENST00000340994 DCAF1Q9Y4B6 1507 aa11.19□□□□□ -0.62
PKHD1-201ENST00000340994 TRIM44Q96DX7 344 aaPredicted RBP11.16□□□□□ -0.62
PKHD1-201ENST00000340994 CCDC180Q9P1Z9 1646 aa11.16□□□□□ -0.62
PKHD1-201ENST00000340994 SLC4A1APQ9BWU0 796 aaKnown RBP11.15□□□□□ -0.62
PKHD1-201ENST00000340994 NCLP19338 710 aaKnown RBP11.13□□□□□ -0.63
PKHD1-201ENST00000340994 ERICH6BQ5W0A0 696 aa11.12□□□□□ -0.63
PKHD1-201ENST00000340994 DDRGK1Q96HY6 314 aa11.11□□□□□ -0.63
PKHD1-201ENST00000340994 LOC105371045A0A1W2PR82 267 aa11.1□□□□□ -0.63
PKHD1-201ENST00000340994 NPM2Q86SE8 214 aaKnown RBP11.1□□□□□ -0.63
PKHD1-201ENST00000340994 CNGB1Q14028 1251 aaPredicted RBP11.07□□□□□ -0.64
PKHD1-201ENST00000340994 BECN1Q14457 450 aa11.07□□□□□ -0.64
PKHD1-201ENST00000340994 FKBP8Q14318 412 aa11.06□□□□□ -0.64
PKHD1-201ENST00000340994 FAM50AQ14320 339 aaKnown RBP11.05□□□□□ -0.64
PKHD1-201ENST00000340994 CDK11BP21127 795 aaKnown RBP11.05□□□□□ -0.64
PKHD1-201ENST00000340994 NBR1Q14596 966 aa11.05□□□□□ -0.64
PKHD1-201ENST00000340994 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.04□□□□□ -0.64
PKHD1-201ENST00000340994 GOLGA6L22H0YM25 854 aa11.02□□□□□ -0.65
PKHD1-201ENST00000340994 CCDC136Q96JN2 1154 aa11.01□□□□□ -0.65
PKHD1-201ENST00000340994 NEUROD1Q13562 356 aa11.01□□□□□ -0.65
PKHD1-201ENST00000340994 TRIM52Q96A61 297 aa11□□□□□ -0.65
PKHD1-201ENST00000340994 PPM1GO15355 546 aaPredicted RBP10.97□□□□□ -0.65
PKHD1-201ENST00000340994 SCAF1Q9H7N4 1312 aaKnown RBP10.95□□□□□ -0.66
PKHD1-201ENST00000340994 TONSLQ96HA7 1378 aa10.95□□□□□ -0.66
PKHD1-201ENST00000340994 HNRNPUQ00839 825 aaKnown RBP eCLIP10.93□□□□□ -0.66
PKHD1-201ENST00000340994 ZNF326Q5BKZ1 582 aaKnown RBP10.9□□□□□ -0.67
PKHD1-201ENST00000340994 BCL11AQ9H165 835 aa10.89□□□□□ -0.67
PKHD1-201ENST00000340994 NAP1L5Q96NT1 182 aaPredicted RBP10.89□□□□□ -0.67
PKHD1-201ENST00000340994 MYH16Q9H6N6 1097 aa10.89□□□□□ -0.67
PKHD1-201ENST00000340994 CHAF1AQ13111 956 aaPredicted RBP10.88□□□□□ -0.67
PKHD1-201ENST00000340994 GOLGA6L6A8MZA4 724 aa10.87□□□□□ -0.67
PKHD1-201ENST00000340994 PTMAP06454 111 aaKnown RBP10.86□□□□□ -0.67
PKHD1-201ENST00000340994 L1TD1Q5T7N2 865 aaKnown RBP10.85□□□□□ -0.67
PKHD1-201ENST00000340994 NRDCO43847 1150 aa10.84□□□□□ -0.67
PKHD1-201ENST00000340994 DNTTIP2Q5QJE6 756 aaKnown RBP10.83□□□□□ -0.68
PKHD1-201ENST00000340994 ZRSR1Q15695 479 aaKnown RBP10.83□□□□□ -0.68
PKHD1-201ENST00000340994 NOP58Q9Y2X3 529 aaKnown RBP10.83□□□□□ -0.68
PKHD1-201ENST00000340994 ARXQ96QS3 562 aa10.82□□□□□ -0.68
PKHD1-201ENST00000340994 CASC1Q6TDU7 716 aa10.8□□□□□ -0.68
PKHD1-201ENST00000340994 PTMSP20962 102 aa10.79□□□□□ -0.68
PKHD1-201ENST00000340994 TMC1Q8TDI8 760 aa10.79□□□□□ -0.68
PKHD1-201ENST00000340994 SLC24A1O60721 1099 aa10.77□□□□□ -0.69
PKHD1-201ENST00000340994 ARID4BQ4LE39 1312 aaPredicted RBP10.76□□□□□ -0.69
PKHD1-201ENST00000340994 MSNP26038 577 aaKnown RBP10.76□□□□□ -0.69
PKHD1-201ENST00000340994 WDR43Q15061 677 aaKnown RBP eCLIP10.75□□□□□ -0.69
PKHD1-201ENST00000340994 FAM9BQ8IZU0 186 aa10.74□□□□□ -0.69
PKHD1-201ENST00000340994 MRS2Q9HD23 443 aa10.74□□□□□ -0.69
PKHD1-201ENST00000340994 CHMP4BQ9H444 224 aaKnown RBP10.71□□□□□ -0.7
PKHD1-201ENST00000340994 DDX10Q13206 875 aaKnown RBP10.7□□□□□ -0.7
PKHD1-201ENST00000340994 PPP4R2Q9NY27 417 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms