RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 NET1P47035 1189 aa2.39□□□□□ -2.03
snR48snR48 DAL4Q04895 635 aa2.39□□□□□ -2.03
snR48snR48 SRP101P32916 621 aa2.38□□□□□ -2.03
snR48snR48 ROD1Q02805 837 aa2.38□□□□□ -2.03
snR48snR48 GEP3Q08622 556 aa2.38□□□□□ -2.03
snR48snR48 OSW2Q12202 724 aa2.38□□□□□ -2.03
snR48snR48 YPL068CQ02749 293 aa2.37□□□□□ -2.03
snR48snR48 RPL11AP0C0W9 174 aaKnown RBP2.36□□□□□ -2.03
snR48snR48 HOM2P13663 365 aaKnown RBP2.36□□□□□ -2.03
snR48snR48 SPO11P23179 398 aa2.36□□□□□ -2.03
snR48snR48 ELO3P40319 345 aa2.36□□□□□ -2.03
snR48snR48 MPH1P40562 993 aa2.36□□□□□ -2.03
snR48snR48 CNN1P43618 361 aa2.36□□□□□ -2.03
snR48snR48 SIW14P53965 281 aa2.36□□□□□ -2.03
snR48snR48 RPL11BQ3E757 174 aaPredicted RBP2.36□□□□□ -2.03
snR48snR48 MET3P08536 511 aa2.35□□□□□ -2.03
snR48snR48 TRL1P09880 827 aaKnown RBP2.35□□□□□ -2.03
snR48snR48 DBP2P24783 546 aaKnown RBP2.35□□□□□ -2.03
snR48snR48 DMC1P25453 334 aa2.35□□□□□ -2.03
snR48snR48 ECM21P38167 1117 aaKnown RBP2.35□□□□□ -2.03
snR48snR48 PIC2P40035 300 aa2.35□□□□□ -2.03
snR48snR48 DBP5P20449 482 aaKnown RBP2.34□□□□□ -2.03
snR48snR48 SYP1P25623 870 aaKnown RBP2.34□□□□□ -2.03
snR48snR48 VPS35P34110 944 aa2.34□□□□□ -2.03
snR48snR48 PCL5P38794 229 aa2.34□□□□□ -2.03
snR48snR48 DLT1Q04216 342 aa2.34□□□□□ -2.03
snR48snR48 YLR149CQ99296 730 aa2.34□□□□□ -2.03
snR48snR48 FRT1Q99332 602 aa2.34□□□□□ -2.03
snR48snR48 MET30P39014 640 aa2.33□□□□□ -2.04
snR48snR48 HXT13P39924 564 aa2.33□□□□□ -2.04
snR48snR48 HXT17P53631 564 aa2.33□□□□□ -2.04
snR48snR48 RIA1P53893 1110 aa2.33□□□□□ -2.04
snR48snR48 HXT15P54854 567 aa2.33□□□□□ -2.04
snR48snR48 VPS34P22543 875 aa2.32□□□□□ -2.04
snR48snR48 SED4P25365 1065 aa2.32□□□□□ -2.04
snR48snR48 EMP70P32802 667 aa2.32□□□□□ -2.04
snR48snR48 CTF13P35203 478 aa2.32□□□□□ -2.04
snR48snR48 HRB1P38922 454 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
snR48snR48 CCT4P39078 528 aaKnown RBP2.32□□□□□ -2.04
snR48snR48 TOS4Q06266 489 aa2.32□□□□□ -2.04
snR48snR48 OSW1Q08692 278 aa2.32□□□□□ -2.04
snR48snR48 YEL020CP39994 560 aa2.31□□□□□ -2.04
snR48snR48 DMA2P53924 522 aa2.31□□□□□ -2.04
snR48snR48 GNT1Q12096 491 aa2.31□□□□□ -2.04
snR48snR48 YLL058WQ12198 575 aa2.31□□□□□ -2.04
snR48snR48 TAF3Q12297 353 aa2.31□□□□□ -2.04
snR48snR48 RPN13O13563 156 aa2.3□□□□□ -2.04
snR48snR48 PNT1P38969 423 aa2.3□□□□□ -2.04
snR48snR48 DAM1P53267 343 aa2.3□□□□□ -2.04
snR48snR48 NUT2Q06213 157 aa2.3□□□□□ -2.04
snR48snR48 CAF20P12962 161 aaKnown RBP2.29□□□□□ -2.04
snR48snR48 FUN30P31380 1131 aa2.28□□□□□ -2.04
snR48snR48 GCD6P32501 712 aaKnown RBP2.28□□□□□ -2.04
snR48snR48 YJL163CP46996 555 aa2.28□□□□□ -2.04
snR48snR48 PEX19Q07418 342 aa2.28□□□□□ -2.04
snR48snR48 PGK1P00560 416 aaKnown RBP2.27□□□□□ -2.05
snR48snR48 SEC21P32074 935 aaKnown RBP2.27□□□□□ -2.05
snR48snR48 PAC2P39937 518 aa2.27□□□□□ -2.05
snR48snR48 XBP1P40489 647 aa2.27□□□□□ -2.05
snR48snR48 MDJ2P42834 146 aa2.27□□□□□ -2.05
snR48snR48 YGL176CP46945 554 aa2.27□□□□□ -2.05
snR48snR48 GNP1P48813 663 aa2.27□□□□□ -2.05
snR48snR48 SRT1Q03175 343 aa2.27□□□□□ -2.05
snR48snR48 MDM38Q08179 573 aa2.27□□□□□ -2.05
snR48snR48 TRM11Q12463 433 aa2.27□□□□□ -2.05
snR48snR48 PHO4P07270 312 aaKnown RBP2.26□□□□□ -2.05
snR48snR48 NEW1Q08972 1196 aaKnown RBP2.26□□□□□ -2.05
snR48snR48 YBR053CP38235 358 aa2.25□□□□□ -2.05
snR48snR48 GIC1P38785 314 aa2.25□□□□□ -2.05
snR48snR48 FAA3P39002 694 aa2.25□□□□□ -2.05
snR48snR48 YJL206CP39529 758 aa2.25□□□□□ -2.05
snR48snR48 HXK1P04806 485 aaKnown RBP2.24□□□□□ -2.05
snR48snR48 SEC8P32855 1065 aa2.24□□□□□ -2.05
snR48snR48 YKL151CP36059 337 aa2.24□□□□□ -2.05
snR48snR48 CCT7P42943 550 aaKnown RBP2.24□□□□□ -2.05
snR48snR48 MUP1P50276 574 aa2.24□□□□□ -2.05
snR48snR48 NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
snR48snR48 SGO1Q08490 590 aa2.24□□□□□ -2.05
snR48snR48 RPC82P32349 654 aa2.23□□□□□ -2.05
snR48snR48 GRS1P38088 690 aaKnown RBP2.23□□□□□ -2.05
snR48snR48 SMX3P54999 86 aaPredicted RBP2.23□□□□□ -2.05
snR48snR48 RPL34AP87262 121 aaPredicted RBP2.23□□□□□ -2.05
snR48snR48 IRC8P47046 822 aa2.22□□□□□ -2.05
snR48snR48 CRR1Q05790 422 aa2.22□□□□□ -2.05
snR48snR48 OXR1Q08952 273 aa2.22□□□□□ -2.05
snR48snR48 TUB3P09734 445 aaKnown RBP2.21□□□□□ -2.06
snR48snR48 MRK1P50873 501 aa2.21□□□□□ -2.06
snR48snR48 YGR053CP53234 283 aa2.21□□□□□ -2.06
snR48snR48 SSL2Q00578 843 aa2.21□□□□□ -2.06
snR48snR48 HRQ1Q05549 1077 aa2.21□□□□□ -2.06
snR48snR48 FKH2P41813 862 aa2.2□□□□□ -2.06
snR48snR48 TIF35Q04067 274 aaKnown RBP2.2□□□□□ -2.06
snR48snR48 FBP1P09201 348 aa2.19□□□□□ -2.06
snR48snR48 ERG11P10614 530 aa2.19□□□□□ -2.06
snR48snR48 CBR1P38626 284 aaKnown RBP2.19□□□□□ -2.06
snR48snR48 SPP382Q06411 708 aaPredicted RBP2.19□□□□□ -2.06
snR48snR48 MCM7P38132 845 aa2.18□□□□□ -2.06
snR48snR48 NPP2P39997 493 aa2.18□□□□□ -2.06
snR48snR48 AMA1P50082 593 aa2.18□□□□□ -2.06
snR48snR48 SUB2Q07478 446 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms