RNA–Protein interactions for RNA: YPR057W

BRR1, Transcript of snRNP protein component of spliceosomal snRNPs, yeastyeast

Gene BRR1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR1YPR057W HAA1Q12753 694 aaKnown RBP10.24□□□□□ -0.77
BRR1YPR057W PPR1P07272 904 aaPredicted RBP10.23□□□□□ -0.77
BRR1YPR057W PHO8P11491 566 aa10.23□□□□□ -0.77
BRR1YPR057W PET123P17558 318 aa10.23□□□□□ -0.77
BRR1YPR057W SEC8P32855 1065 aa10.23□□□□□ -0.77
BRR1YPR057W IXR1P33417 597 aa10.23□□□□□ -0.77
BRR1YPR057W YEL1P34225 687 aa10.23□□□□□ -0.77
BRR1YPR057W BSD2P38356 321 aa10.23□□□□□ -0.77
BRR1YPR057W CAJ1P39101 391 aa10.23□□□□□ -0.77
BRR1YPR057W CEP3P40969 608 aa10.23□□□□□ -0.77
BRR1YPR057W CAF130P53280 1122 aaPredicted RBP10.23□□□□□ -0.77
BRR1YPR057W FAL1Q12099 399 aaKnown RBP10.23□□□□□ -0.77
BRR1YPR057W YOL098CQ12496 1037 aa10.23□□□□□ -0.77
BRR1YPR057W SCP160P06105 1222 aaKnown RBP RIP-Chip data10.22□□□□□ -0.77not detected
BRR1YPR057W HVG1P0CE11 249 aa10.22□□□□□ -0.77
BRR1YPR057W MTF2P10849 440 aa10.22□□□□□ -0.77
BRR1YPR057W YSC83P32792 385 aa10.22□□□□□ -0.77
BRR1YPR057W STO1P34160 861 aaKnown RBP10.22□□□□□ -0.77
BRR1YPR057W TVP38P36164 337 aa10.22□□□□□ -0.77
BRR1YPR057W SLD5Q03406 294 aa10.22□□□□□ -0.77
BRR1YPR057W GIR2Q03768 265 aaPredicted RBP10.22□□□□□ -0.77
BRR1YPR057W UTP5Q04177 643 aaKnown RBP10.22□□□□□ -0.77
BRR1YPR057W RBA50Q04418 439 aa10.22□□□□□ -0.77
BRR1YPR057W SVF1Q05515 481 aa10.22□□□□□ -0.77
BRR1YPR057W NOP58Q12499 511 aaKnown RBP10.22□□□□□ -0.77
BRR1YPR057W PET111P08468 800 aa10.21□□□□□ -0.77
BRR1YPR057W DBP5P20449 482 aaKnown RBP10.21□□□□□ -0.77
BRR1YPR057W PDC6P26263 563 aaKnown RBP10.21□□□□□ -0.77
BRR1YPR057W KTR2P33550 425 aa10.21□□□□□ -0.77
BRR1YPR057W ATG19P35193 415 aa10.21□□□□□ -0.77
BRR1YPR057W DBP7P36120 742 aaKnown RBP10.21□□□□□ -0.77
BRR1YPR057W SMC2P38989 1170 aaKnown RBP10.21□□□□□ -0.77
BRR1YPR057W SEC9P40357 651 aa10.21□□□□□ -0.77
BRR1YPR057W IES1P43579 692 aa10.21□□□□□ -0.77
BRR1YPR057W JIP4Q03361 876 aa10.21□□□□□ -0.77
BRR1YPR057W VPS60Q03390 229 aa10.21□□□□□ -0.77
BRR1YPR057W TUP1P16649 713 aa10.2□□□□□ -0.78
BRR1YPR057W UBC1P21734 215 aaKnown RBP10.2□□□□□ -0.78
BRR1YPR057W CDC48P25694 835 aaKnown RBP10.2□□□□□ -0.78
BRR1YPR057W MCX1P38323 520 aaPredicted RBP10.2□□□□□ -0.78
BRR1YPR057W EFM4P40516 257 aa10.2□□□□□ -0.78
BRR1YPR057W LCB2P40970 561 aa10.2□□□□□ -0.78
BRR1YPR057W FIG4P42837 879 aa10.2□□□□□ -0.78
BRR1YPR057W DUS4Q06063 367 aa10.2□□□□□ -0.78
BRR1YPR057W SWI6P09959 803 aa10.19□□□□□ -0.78
BRR1YPR057W XRS2P33301 854 aa10.19□□□□□ -0.78
BRR1YPR057W TFC4P33339 1025 aa10.19□□□□□ -0.78
BRR1YPR057W SMC3P47037 1230 aa10.19□□□□□ -0.78
BRR1YPR057W COS5P47187 383 aa10.19□□□□□ -0.78
BRR1YPR057W ROD1Q02805 837 aa10.19□□□□□ -0.78
BRR1YPR057W OPY2Q06810 360 aa10.19□□□□□ -0.78
BRR1YPR057W YPR078CQ06813 372 aa10.19□□□□□ -0.78
BRR1YPR057W RLP24Q07915 199 aaKnown RBP10.19□□□□□ -0.78
BRR1YPR057W SMC5Q08204 1093 aa10.19□□□□□ -0.78
BRR1YPR057W TY3A-GQ12173 290 aa10.19□□□□□ -0.78
BRR1YPR057W NCR1Q12200 1170 aa10.19□□□□□ -0.78
BRR1YPR057W MCM16Q12262 181 aa10.19□□□□□ -0.78
BRR1YPR057W TY3A-IQ99219 290 aa10.19□□□□□ -0.78
BRR1YPR057W RAD57P25301 460 aa10.18□□□□□ -0.78
BRR1YPR057W NAM7P30771 971 aaKnown RBP10.18□□□□□ -0.78
BRR1YPR057W SMC1P32908 1225 aa10.18□□□□□ -0.78
BRR1YPR057W NIP100P33420 868 aa10.18□□□□□ -0.78
BRR1YPR057W VPS35P34110 944 aa10.18□□□□□ -0.78
BRR1YPR057W ERC1P38767 581 aa10.18□□□□□ -0.78
BRR1YPR057W YEL025CP39991 1188 aa10.18□□□□□ -0.78
BRR1YPR057W SDS3P40505 327 aa10.18□□□□□ -0.78
BRR1YPR057W VPS53P47061 822 aa10.18□□□□□ -0.78
BRR1YPR057W TAD1P53065 400 aa10.18□□□□□ -0.78
BRR1YPR057W BOP3P53958 396 aa10.18□□□□□ -0.78
BRR1YPR057W YMR321CQ04898 105 aa10.18□□□□□ -0.78
BRR1YPR057W SML1Q04964 104 aa10.18□□□□□ -0.78
BRR1YPR057W YLR297WQ05899 129 aa10.18□□□□□ -0.78
BRR1YPR057W CST9Q06032 482 aa10.18□□□□□ -0.78
BRR1YPR057W NOC3Q07896 663 aaPredicted RBP10.18□□□□□ -0.78
BRR1YPR057W MLH2Q07980 695 aa10.18□□□□□ -0.78
BRR1YPR057W SFI1Q12369 946 aa10.18□□□□□ -0.78
BRR1YPR057W TOM70P07213 617 aaKnown RBP10.17□□□□□ -0.78
BRR1YPR057W CHS2P14180 963 aa10.17□□□□□ -0.78
BRR1YPR057W STE11P23561 717 aa10.17□□□□□ -0.78
BRR1YPR057W COT1P32798 439 aa10.17□□□□□ -0.78
BRR1YPR057W ASH1P34233 588 aa10.17□□□□□ -0.78
BRR1YPR057W APE3P37302 537 aaKnown RBP10.17□□□□□ -0.78
BRR1YPR057W NDC80P40460 691 aa10.17□□□□□ -0.78
BRR1YPR057W SPR3P41901 512 aa10.17□□□□□ -0.78
BRR1YPR057W TAM41P53230 385 aa10.17□□□□□ -0.78
BRR1YPR057W TIM8P57744 87 aa10.17□□□□□ -0.78
BRR1YPR057W DON1Q05610 365 aa10.17□□□□□ -0.78
BRR1YPR057W VAC14Q06708 880 aa10.17□□□□□ -0.78
BRR1YPR057W FKS1P38631 1876 aaKnown RBP10.17□□□□□ -0.78
BRR1YPR057W DED1P06634 604 aaKnown RBP10.16□□□□□ -0.78
BRR1YPR057W SRB4P32569 687 aa10.16□□□□□ -0.78
BRR1YPR057W AVT1P47082 602 aa10.16□□□□□ -0.78
BRR1YPR057W MDR1P53258 950 aa10.16□□□□□ -0.78
BRR1YPR057W COQ9Q05779 260 aa10.16□□□□□ -0.78
BRR1YPR057W CSR1Q06705 408 aaKnown RBP10.16□□□□□ -0.78
BRR1YPR057W DAS2Q12084 232 aa10.16□□□□□ -0.78
BRR1YPR057W DPB3P27344 201 aa10.15□□□□□ -0.78
BRR1YPR057W HXT1P32465 570 aa10.15□□□□□ -0.78
BRR1YPR057W YKL023WP36103 277 aaKnown RBP10.15□□□□□ -0.78
BRR1YPR057W MMM1P41800 426 aa10.15□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms