RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W FBP26P32604 452 aa2.39□□□□□ -2.03
SEC16YPL085W YBR071WP38243 211 aa2.39□□□□□ -2.03
SEC16YPL085W PCM1P38628 557 aaKnown RBP2.39□□□□□ -2.03
SEC16YPL085W RTT107P38850 1070 aa2.39□□□□□ -2.03
SEC16YPL085W KAP123P40069 1113 aaKnown RBP2.39□□□□□ -2.03
SEC16YPL085W YFL034WP43564 1073 aa2.39□□□□□ -2.03
SEC16YPL085W MET12P46151 657 aa2.39□□□□□ -2.03
SEC16YPL085W RRP46P53256 223 aaPredicted RBP2.39□□□□□ -2.03
SEC16YPL085W FUS1P11710 512 aa2.38□□□□□ -2.03
SEC16YPL085W HSC82P15108 705 aaKnown RBP2.38□□□□□ -2.03
SEC16YPL085W MCM4P30665 933 aaKnown RBP2.38□□□□□ -2.03
SEC16YPL085W TOM20P35180 183 aa2.38□□□□□ -2.03
SEC16YPL085W RAD55P38953 406 aa2.38□□□□□ -2.03
SEC16YPL085W NOC2P39744 710 aaKnown RBP2.38□□□□□ -2.03
SEC16YPL085W YER034WP40022 185 aaKnown RBP2.38□□□□□ -2.03
SEC16YPL085W SIP5P40210 489 aaKnown RBP2.38□□□□□ -2.03
SEC16YPL085W IVY1Q04934 453 aa2.38□□□□□ -2.03
SEC16YPL085W WRS1Q12109 432 aaKnown RBP2.38□□□□□ -2.03
SEC16YPL085W COQ4O13525 335 aa2.38□□□□□ -2.03
SEC16YPL085W SSB1P11484 613 aaKnown RBP2.38□□□□□ -2.03
SEC16YPL085W MAK31P23059 88 aa2.38□□□□□ -2.03
SEC16YPL085W HIR1P32479 840 aa2.38□□□□□ -2.03
SEC16YPL085W SSB2P40150 613 aaKnown RBP2.38□□□□□ -2.03
SEC16YPL085W YIL067CP40514 678 aa2.38□□□□□ -2.03
SEC16YPL085W TGS1Q12052 315 aa2.38□□□□□ -2.03
SEC16YPL085W MAM3Q12296 706 aa2.38□□□□□ -2.03
SEC16YPL085W FRS2P15625 503 aaKnown RBP2.38□□□□□ -2.03
SEC16YPL085W ATP7P30902 174 aa2.38□□□□□ -2.03
SEC16YPL085W ABD1P32783 436 aaPredicted RBP2.38□□□□□ -2.03
SEC16YPL085W PTC3P34221 468 aaKnown RBP2.38□□□□□ -2.03
SEC16YPL085W YKR075CP36155 307 aa2.38□□□□□ -2.03
SEC16YPL085W PXL1P36166 706 aa2.38□□□□□ -2.03
SEC16YPL085W YBR259WP38338 688 aa2.38□□□□□ -2.03
SEC16YPL085W IES1P43579 692 aa2.38□□□□□ -2.03
SEC16YPL085W SET2P46995 733 aaKnown RBP2.38□□□□□ -2.03
SEC16YPL085W YDR109CQ04585 715 aa2.38□□□□□ -2.03
SEC16YPL085W YPR078CQ06813 372 aa2.38□□□□□ -2.03
SEC16YPL085W ISA1Q07821 250 aaPredicted RBP2.38□□□□□ -2.03
SEC16YPL085W PEX15Q08215 383 aa2.38□□□□□ -2.03
SEC16YPL085W GAS4Q08271 471 aa2.38□□□□□ -2.03
SEC16YPL085W NKP1Q12493 238 aa2.38□□□□□ -2.03
SEC16YPL085W TIF6Q12522 245 aaKnown RBP2.38□□□□□ -2.03
SEC16YPL085W CLN3P13365 580 aa2.38□□□□□ -2.03
SEC16YPL085W HSP60P19882 572 aaKnown RBP2.38□□□□□ -2.03
SEC16YPL085W HIR2P32480 875 aa2.38□□□□□ -2.03
SEC16YPL085W SEG2P34250 1132 aa2.38□□□□□ -2.03
SEC16YPL085W VHC1P38329 1120 aa2.38□□□□□ -2.03
SEC16YPL085W MIC19P43594 170 aa2.38□□□□□ -2.03
SEC16YPL085W YJR039WP47107 1121 aa2.38□□□□□ -2.03
SEC16YPL085W ATG1P53104 897 aa2.38□□□□□ -2.03
SEC16YPL085W NKP2Q06162 153 aa2.38□□□□□ -2.03
SEC16YPL085W TBS1P38114 1094 aa2.38□□□□□ -2.03
SEC16YPL085W CIC1P38779 376 aaKnown RBP2.38□□□□□ -2.03
SEC16YPL085W YMR147WP40218 223 aaKnown RBP2.38□□□□□ -2.03
SEC16YPL085W VPS25P47142 202 aa2.38□□□□□ -2.03
SEC16YPL085W ZDS2P54786 942 aa2.38□□□□□ -2.03
SEC16YPL085W UBP16Q02863 499 aa2.38□□□□□ -2.03
SEC16YPL085W TFC6Q06339 672 aa2.38□□□□□ -2.03
SEC16YPL085W TMA16Q08687 178 aa2.38□□□□□ -2.03
SEC16YPL085W UAF30Q08747 228 aa2.38□□□□□ -2.03
SEC16YPL085W RIM20Q12033 661 aa2.38□□□□□ -2.03
SEC16YPL085W RTP1Q12751 981 aa2.38□□□□□ -2.03
SEC16YPL085W SAM2P19358 384 aaKnown RBP2.37□□□□□ -2.03
SEC16YPL085W SWC3P31376 625 aa2.37□□□□□ -2.03
SEC16YPL085W YPT52P36018 234 aaKnown RBP2.37□□□□□ -2.03
SEC16YPL085W ADE17P38009 592 aaKnown RBP2.37□□□□□ -2.03
SEC16YPL085W YLF2P38746 405 aa2.37□□□□□ -2.03
SEC16YPL085W MND2P40577 368 aa2.37□□□□□ -2.03
SEC16YPL085W YGR012WP53206 393 aa2.37□□□□□ -2.03
SEC16YPL085W APC1P53886 1748 aa2.37□□□□□ -2.03
SEC16YPL085W KRE33P53914 1056 aaKnown RBP2.37□□□□□ -2.03
SEC16YPL085W FMP25Q08023 583 aa2.37□□□□□ -2.03
SEC16YPL085W PUS1Q12211 544 aaKnown RBP2.37□□□□□ -2.03
SEC16YPL085W CIT1P00890 479 aa2.37□□□□□ -2.03
SEC16YPL085W TUB2P02557 457 aaKnown RBP2.37□□□□□ -2.03
SEC16YPL085W MIS1P09440 975 aaKnown RBP2.37□□□□□ -2.03
SEC16YPL085W RGR1P19263 1082 aa2.37□□□□□ -2.03
SEC16YPL085W VPS3P23643 1011 aa2.37□□□□□ -2.03
SEC16YPL085W AFG2P32794 780 aa2.37□□□□□ -2.03
SEC16YPL085W YEL1P34225 687 aa2.37□□□□□ -2.03
SEC16YPL085W TIF4631P39935 952 aaKnown RBP2.37□□□□□ -2.03
SEC16YPL085W JHD1P40034 492 aa2.37□□□□□ -2.03
SEC16YPL085W CUL3P53202 744 aa2.37□□□□□ -2.03
SEC16YPL085W CAF130P53280 1122 aaPredicted RBP2.37□□□□□ -2.03
SEC16YPL085W VPS75P53853 264 aa2.37□□□□□ -2.03
SEC16YPL085W YNL134CP53912 376 aaKnown RBP2.37□□□□□ -2.03
SEC16YPL085W EFM6P53970 246 aa2.37□□□□□ -2.03
SEC16YPL085W UFD2P54860 961 aa2.37□□□□□ -2.03
SEC16YPL085W TIF35Q04067 274 aaKnown RBP2.37□□□□□ -2.03
SEC16YPL085W ATG17Q06410 417 aa2.37□□□□□ -2.03
SEC16YPL085W YOL019WQ08157 551 aa2.37□□□□□ -2.03
SEC16YPL085W YER152CP10356 443 aa2.37□□□□□ -2.03
SEC16YPL085W RRT12P25381 491 aa2.37□□□□□ -2.03
SEC16YPL085W RPL8BP29453 256 aaKnown RBP2.37□□□□□ -2.03
SEC16YPL085W MRX3P38172 270 aa2.37□□□□□ -2.03
SEC16YPL085W YSW1P38280 609 aa2.37□□□□□ -2.03
SEC16YPL085W FIS1P40515 155 aa2.37□□□□□ -2.03
SEC16YPL085W SDA1P53313 767 aaKnown RBP2.37□□□□□ -2.03
SEC16YPL085W FOL1P53848 824 aa2.37□□□□□ -2.03
SEC16YPL085W MYO5Q04439 1219 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 110.7 ms