RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROD1	YOR018W	YEL1	P34225	687 aa		4.28	□□□□□ -1.72
ROD1	YOR018W	RPC25	P35718	212 aa		4.28	□□□□□ -1.72
ROD1	YOR018W	MCD4	P36051	919 aa		4.28	□□□□□ -1.72
ROD1	YOR018W	MRPL10	P36520	322 aa		4.28	□□□□□ -1.72
ROD1	YOR018W	LIF1	P53150	421 aa		4.28	□□□□□ -1.72
ROD1	YOR018W	SOL4	P53315	255 aa		4.28	□□□□□ -1.72
ROD1	YOR018W	SLD5	Q03406	294 aa		4.28	□□□□□ -1.72
ROD1	YOR018W	SPH1	Q06160	661 aa		4.28	□□□□□ -1.72
ROD1	YOR018W	CEX1	Q12453	761 aa		4.28	□□□□□ -1.72
ROD1	YOR018W	AIM44	Q99299	758 aa		4.28	□□□□□ -1.72
ROD1	YOR018W	RPS6A	P0CX37	236 aa	Known RBP	4.27	□□□□□ -1.73
ROD1	YOR018W	RPS6B	P0CX38	236 aa	Predicted RBP	4.27	□□□□□ -1.73
ROD1	YOR018W	VMA2	P16140	517 aa	Known RBP	4.27	□□□□□ -1.73
ROD1	YOR018W	DAL7	P21826	554 aa		4.27	□□□□□ -1.73
ROD1	YOR018W	YUR1	P26725	428 aa		4.27	□□□□□ -1.73
ROD1	YOR018W	TRK2	P28584	889 aa		4.27	□□□□□ -1.73
ROD1	YOR018W	MCR1	P36060	302 aa	Known RBP	4.27	□□□□□ -1.73
ROD1	YOR018W	DBP7	P36120	742 aa	Known RBP	4.27	□□□□□ -1.73
ROD1	YOR018W	PPS1	P38148	807 aa		4.27	□□□□□ -1.73
ROD1	YOR018W	RFT1	P38206	574 aa	Predicted RBP	4.27	□□□□□ -1.73
ROD1	YOR018W	REG2	P38232	338 aa		4.27	□□□□□ -1.73
ROD1	YOR018W	SAP30	P38429	201 aa		4.27	□□□□□ -1.73
ROD1	YOR018W	RRM3	P38766	723 aa		4.27	□□□□□ -1.73
ROD1	YOR018W	DAK2	P43550	591 aa		4.27	□□□□□ -1.73
ROD1	YOR018W	RRT6	P53117	311 aa	Predicted RBP	4.27	□□□□□ -1.73
ROD1	YOR018W	ARK1	P53974	638 aa		4.27	□□□□□ -1.73
ROD1	YOR018W	ALD6	P54115	500 aa	Known RBP	4.27	□□□□□ -1.73
ROD1	YOR018W	CFT2	Q12102	859 aa	Predicted RBP	4.27	□□□□□ -1.73
ROD1	YOR018W	TIP41	Q12199	356 aa		4.27	□□□□□ -1.73
ROD1	YOR018W	ERP3	Q12403	225 aa		4.27	□□□□□ -1.73
ROD1	YOR018W	SAS3	P34218	831 aa		4.27	□□□□□ -1.73
ROD1	YOR018W	MNR2	P35724	969 aa		4.27	□□□□□ -1.73
ROD1	YOR018W	ISW1	P38144	1129 aa		4.27	□□□□□ -1.73
ROD1	YOR018W	RPS7B	P48164	190 aa	Known RBP	4.27	□□□□□ -1.73
ROD1	YOR018W	ROM1	P53046	1155 aa		4.27	□□□□□ -1.73
ROD1	YOR018W	TLG2	Q08144	397 aa		4.27	□□□□□ -1.73
ROD1	YOR018W	PWP2	P25635	923 aa	Known RBP	4.26	□□□□□ -1.73
ROD1	YOR018W	HIR1	P32479	840 aa		4.26	□□□□□ -1.73
ROD1	YOR018W	GCD11	P32481	527 aa	Known RBP	4.26	□□□□□ -1.73
ROD1	YOR018W	YET1	P35723	206 aa		4.26	□□□□□ -1.73
ROD1	YOR018W	UBP5	P39944	805 aa		4.26	□□□□□ -1.73
ROD1	YOR018W	TPM2	P40414	161 aa		4.26	□□□□□ -1.73
ROD1	YOR018W	KTR7	P40504	517 aa		4.26	□□□□□ -1.73
ROD1	YOR018W	AVT1	P47082	602 aa		4.26	□□□□□ -1.73
ROD1	YOR018W	CSM3	Q04659	317 aa		4.26	□□□□□ -1.73
ROD1	YOR018W	SPP382	Q06411	708 aa	Predicted RBP	4.26	□□□□□ -1.73
ROD1	YOR018W	CRD1	Q07560	283 aa		4.26	□□□□□ -1.73
ROD1	YOR018W	CWC2	Q12046	339 aa	Predicted RBP	4.26	□□□□□ -1.73
ROD1	YOR018W	CLF1	Q12309	687 aa	Predicted RBP	4.26	□□□□□ -1.73
ROD1	YOR018W	SMC6	Q12749	1114 aa		4.26	□□□□□ -1.73
ROD1	YOR018W	MIP1	P15801	1254 aa		4.26	□□□□□ -1.73
ROD1	YOR018W	TEC1	P18412	486 aa		4.26	□□□□□ -1.73
ROD1	YOR018W	TKL1	P23254	680 aa	Known RBP	4.26	□□□□□ -1.73
ROD1	YOR018W	MCM3	P24279	971 aa	Known RBP	4.26	□□□□□ -1.73
ROD1	YOR018W	CDC48	P25694	835 aa	Known RBP	4.26	□□□□□ -1.73
ROD1	YOR018W	EUG1	P32474	517 aa		4.26	□□□□□ -1.73
ROD1	YOR018W	YKT6	P36015	200 aa	Known RBP	4.26	□□□□□ -1.73
ROD1	YOR018W	APE3	P37302	537 aa	Known RBP	4.26	□□□□□ -1.73
ROD1	YOR018W	GPD2	P41911	440 aa	Known RBP	4.26	□□□□□ -1.73
ROD1	YOR018W	AIP1	P46680	615 aa	Known RBP	4.26	□□□□□ -1.73
ROD1	YOR018W	PTA1	Q01329	785 aa	Predicted RBP	4.26	□□□□□ -1.73
ROD1	YOR018W	TBF1	Q02457	562 aa		4.26	□□□□□ -1.73
ROD1	YOR018W	RBA50	Q04418	439 aa		4.26	□□□□□ -1.73
ROD1	YOR018W	PFK1	P16861	987 aa	Known RBP	4.25	□□□□□ -1.73
ROD1	YOR018W	VAC17	P25591	423 aa		4.25	□□□□□ -1.73
ROD1	YOR018W	SEC65	P29478	273 aa		4.25	□□□□□ -1.73
ROD1	YOR018W	FLR1	P38124	548 aa		4.25	□□□□□ -1.73
ROD1	YOR018W	SIP3	P38717	1229 aa		4.25	□□□□□ -1.73
ROD1	YOR018W	ACS2	P52910	683 aa	Known RBP	4.25	□□□□□ -1.73
ROD1	YOR018W	BRE5	P53741	515 aa	Known RBP	4.25	□□□□□ -1.73
ROD1	YOR018W	EBS1	Q03466	884 aa	Known RBP	4.25	□□□□□ -1.73
ROD1	YOR018W	RRP43	P25359	394 aa	Predicted RBP	4.25	□□□□□ -1.73
ROD1	YOR018W	BMH1	P29311	267 aa	Known RBP	4.25	□□□□□ -1.73
ROD1	YOR018W	YKL091C	P33324	310 aa	Known RBP	4.25	□□□□□ -1.73
ROD1	YOR018W	MOT2	P34909	587 aa	Known RBP	4.25	□□□□□ -1.73
ROD1	YOR018W	UBX7	P38349	436 aa		4.25	□□□□□ -1.73
ROD1	YOR018W	VAB2	P40003	282 aa		4.25	□□□□□ -1.73
ROD1	YOR018W	THI6	P41835	540 aa		4.25	□□□□□ -1.73
ROD1	YOR018W	NET1	P47035	1189 aa		4.25	□□□□□ -1.73
ROD1	YOR018W	UBP15	P50101	1230 aa		4.25	□□□□□ -1.73
ROD1	YOR018W	NBP1	P52919	319 aa	Predicted RBP	4.25	□□□□□ -1.73
ROD1	YOR018W	TPO2	P53283	614 aa		4.25	□□□□□ -1.73
ROD1	YOR018W	TOF1	P53840	1238 aa		4.25	□□□□□ -1.73
ROD1	YOR018W	YML082W	Q04533	649 aa	Known RBP	4.25	□□□□□ -1.73
ROD1	YOR018W	APL4	Q12028	832 aa		4.25	□□□□□ -1.73
ROD1	YOR018W	CLN3	P13365	580 aa		4.24	□□□□□ -1.73
ROD1	YOR018W	CDC60	P26637	1090 aa	Known RBP	4.24	□□□□□ -1.73
ROD1	YOR018W	MFT1	P33441	392 aa	Known RBP	4.24	□□□□□ -1.73
ROD1	YOR018W	RRN7	P40992	514 aa		4.24	□□□□□ -1.73
ROD1	YOR018W	OYE2	Q03558	400 aa	Known RBP	4.24	□□□□□ -1.73
ROD1	YOR018W	RRP15	Q06511	250 aa	Predicted RBP	4.24	□□□□□ -1.73
ROD1	YOR018W	GPI13	Q07830	1017 aa		4.24	□□□□□ -1.73
ROD1	YOR018W	PRT1	P06103	763 aa	Known RBP	4.24	□□□□□ -1.73
ROD1	YOR018W	PRP22	P24384	1145 aa	Known RBP	4.24	□□□□□ -1.73
ROD1	YOR018W	MRC1	P25588	1096 aa		4.24	□□□□□ -1.73
ROD1	YOR018W	SUV3	P32580	737 aa		4.24	□□□□□ -1.73
ROD1	YOR018W	MIC60	P36112	540 aa		4.24	□□□□□ -1.73
ROD1	YOR018W	PCH2	P38126	564 aa		4.24	□□□□□ -1.73
ROD1	YOR018W	ERP5	P38819	212 aa		4.24	□□□□□ -1.73
ROD1	YOR018W	SPT8	P38915	602 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms