RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C YOR111WQ99210 232 aa10.13□□□□□ -0.79
SPT20YOL148C PYC2P32327 1180 aaKnown RBP10.12□□□□□ -0.79
SPT20YOL148C RPT3P33298 428 aaKnown RBP10.12□□□□□ -0.79
SPT20YOL148C HDA1P53973 706 aa10.12□□□□□ -0.79
SPT20YOL148C RPS15Q01855 142 aaKnown RBP10.12□□□□□ -0.79
SPT20YOL148C GTB1Q04924 702 aa10.12□□□□□ -0.79
SPT20YOL148C MLH2Q07980 695 aa10.12□□□□□ -0.79
SPT20YOL148C MET7Q08645 548 aa10.12□□□□□ -0.79
SPT20YOL148C ERG11P10614 530 aa10.12□□□□□ -0.79
SPT20YOL148C SSB1P11484 613 aaKnown RBP10.12□□□□□ -0.79
SPT20YOL148C YBL055CP34220 418 aaPredicted RBP10.12□□□□□ -0.79
SPT20YOL148C SSB2P40150 613 aaKnown RBP10.12□□□□□ -0.79
SPT20YOL148C YRB1P41920 201 aaKnown RBP10.12□□□□□ -0.79
SPT20YOL148C KRE28Q04431 385 aa10.12□□□□□ -0.79
SPT20YOL148C SPO21Q12411 609 aa10.12□□□□□ -0.79
SPT20YOL148C SNA3P14359 133 aa10.11□□□□□ -0.79
SPT20YOL148C VPH2P32341 215 aa10.11□□□□□ -0.79
SPT20YOL148C XRS2P33301 854 aa10.11□□□□□ -0.79
SPT20YOL148C IOC3P43596 787 aa10.11□□□□□ -0.79
SPT20YOL148C ALG2P43636 503 aa10.11□□□□□ -0.79
SPT20YOL148C PTK2P47116 818 aaKnown RBP10.11□□□□□ -0.79
SPT20YOL148C UBA2P52488 636 aa10.11□□□□□ -0.79
SPT20YOL148C DIG1Q03063 452 aaKnown RBP10.11□□□□□ -0.79
SPT20YOL148C ATG13Q06628 738 aa10.11□□□□□ -0.79
SPT20YOL148C YPR078CQ06813 372 aa10.11□□□□□ -0.79
SPT20YOL148C AIM41Q12032 185 aa10.11□□□□□ -0.79
SPT20YOL148C CHS5Q12114 671 aaKnown RBP10.11□□□□□ -0.79
SPT20YOL148C IES3Q12345 250 aa10.11□□□□□ -0.79
SPT20YOL148C ENO2P00925 437 aaKnown RBP10.1□□□□□ -0.79
SPT20YOL148C CHO2P05374 869 aaKnown RBP10.1□□□□□ -0.79
SPT20YOL148C RNR3P21672 869 aaKnown RBP10.1□□□□□ -0.79
SPT20YOL148C CDC48P25694 835 aaKnown RBP10.1□□□□□ -0.79
SPT20YOL148C NPL6P32832 435 aa10.1□□□□□ -0.79
SPT20YOL148C NPL4P33755 580 aa10.1□□□□□ -0.79
SPT20YOL148C APL6P46682 809 aa10.1□□□□□ -0.79
SPT20YOL148C MET6P05694 767 aaKnown RBP10.1□□□□□ -0.79
SPT20YOL148C ADE3P07245 946 aaKnown RBP10.1□□□□□ -0.79
SPT20YOL148C SMC1P32908 1225 aa10.1□□□□□ -0.79
SPT20YOL148C RCK2P38623 610 aa10.1□□□□□ -0.79
SPT20YOL148C COS6P53344 381 aa10.1□□□□□ -0.79
SPT20YOL148C YNL040WP53960 456 aaPredicted RBP10.1□□□□□ -0.79
SPT20YOL148C PRP42Q03776 544 aaKnown RBP10.1□□□□□ -0.79
SPT20YOL148C YPL216WQ08964 1102 aa10.1□□□□□ -0.79
SPT20YOL148C POM152P39685 1337 aa10.09□□□□□ -0.79
SPT20YOL148C NUC1P08466 329 aa10.09□□□□□ -0.79
SPT20YOL148C ADE2P21264 571 aaKnown RBP10.09□□□□□ -0.79
SPT20YOL148C RPC19P28000 142 aaKnown RBP10.09□□□□□ -0.79
SPT20YOL148C ANP1P32629 500 aa10.09□□□□□ -0.79
SPT20YOL148C NIP100P33420 868 aa10.09□□□□□ -0.79
SPT20YOL148C RPC37P36121 282 aa10.09□□□□□ -0.79
SPT20YOL148C AMN1P38285 549 aaPredicted RBP10.09□□□□□ -0.79
SPT20YOL148C MMM1P41800 426 aa10.09□□□□□ -0.79
SPT20YOL148C NMD5P46970 1048 aa10.09□□□□□ -0.79
SPT20YOL148C TAD1P53065 400 aa10.09□□□□□ -0.79
SPT20YOL148C YGR021WP53212 290 aa10.09□□□□□ -0.79
SPT20YOL148C LGE1Q02796 332 aaKnown RBP10.09□□□□□ -0.79
SPT20YOL148C ATG17Q06410 417 aa10.09□□□□□ -0.79
SPT20YOL148C YOR389WQ08912 624 aa10.09□□□□□ -0.79
SPT20YOL148C DCD1P06773 312 aa10.08□□□□□ -0.8
SPT20YOL148C MRE11P32829 692 aa10.08□□□□□ -0.8
SPT20YOL148C SAK1P38990 1142 aa10.08□□□□□ -0.8
SPT20YOL148C YGL138CP53122 345 aa10.08□□□□□ -0.8
SPT20YOL148C HOP2P53187 214 aa10.08□□□□□ -0.8
SPT20YOL148C SFB2P53953 876 aa10.08□□□□□ -0.8
SPT20YOL148C GIS4Q04233 774 aa10.08□□□□□ -0.8
SPT20YOL148C FOB1O13329 566 aa10.07□□□□□ -0.8
SPT20YOL148C PLC1P32383 869 aa10.07□□□□□ -0.8
SPT20YOL148C EFB1P32471 206 aaKnown RBP10.07□□□□□ -0.8
SPT20YOL148C TOA1P32773 286 aa10.07□□□□□ -0.8
SPT20YOL148C SRL3P36167 246 aa10.07□□□□□ -0.8
SPT20YOL148C GEF1P37020 779 aa10.07□□□□□ -0.8
SPT20YOL148C ECM2P38241 364 aaKnown RBP10.07□□□□□ -0.8
SPT20YOL148C HSM3P38348 480 aa10.07□□□□□ -0.8
SPT20YOL148C ALG5P40350 334 aa10.07□□□□□ -0.8
SPT20YOL148C THI6P41835 540 aa10.07□□□□□ -0.8
SPT20YOL148C EMW1P42842 904 aaKnown RBP10.07□□□□□ -0.8
SPT20YOL148C SDA1P53313 767 aaKnown RBP10.07□□□□□ -0.8
SPT20YOL148C COG6P53959 839 aa10.07□□□□□ -0.8
SPT20YOL148C UTP6Q02354 440 aaKnown RBP10.07□□□□□ -0.8
SPT20YOL148C MEU1Q07938 337 aaKnown RBP RIP-Chip data10.07□□□□□ -0.8not detected
SPT20YOL148C RUP1Q12242 671 aa10.07□□□□□ -0.8
SPT20YOL148C CLF1Q12309 687 aaPredicted RBP10.07□□□□□ -0.8
SPT20YOL148C TUS1Q06412 1307 aa10.07□□□□□ -0.8
SPT20YOL148C TUF1P02992 437 aaKnown RBP10.07□□□□□ -0.8
SPT20YOL148C SUI3P09064 285 aaKnown RBP10.07□□□□□ -0.8
SPT20YOL148C MAK31P23059 88 aa10.07□□□□□ -0.8
SPT20YOL148C ERP5P38819 212 aa10.07□□□□□ -0.8
SPT20YOL148C ATG36P46983 293 aa10.07□□□□□ -0.8
SPT20YOL148C HPC2Q01448 625 aa10.07□□□□□ -0.8
SPT20YOL148C MDM1Q01846 1127 aa10.07□□□□□ -0.8
SPT20YOL148C UTP14Q04500 899 aaKnown RBP10.07□□□□□ -0.8
SPT20YOL148C NOC3Q07896 663 aaPredicted RBP10.07□□□□□ -0.8
SPT20YOL148C PHM7Q12252 991 aa10.07□□□□□ -0.8
SPT20YOL148C RPL24AP04449 155 aaKnown RBP10.06□□□□□ -0.8
SPT20YOL148C THR4P16120 514 aaKnown RBP10.06□□□□□ -0.8
SPT20YOL148C SPS22P25380 463 aa10.06□□□□□ -0.8
SPT20YOL148C OXP1P28273 1286 aa10.06□□□□□ -0.8
SPT20YOL148C STT3P39007 718 aaKnown RBP10.06□□□□□ -0.8
SPT20YOL148C JEM1P40358 645 aa10.06□□□□□ -0.8
SPT20YOL148C SUM1P46676 1062 aa10.06□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms