RNA–Protein interactions for RNA: YOL054W

PSH1, Transcript of E3 ubiquitin ligase targeting centromere-binding protein Cse4p, yeastyeast

Gene PSH1, Length 1,221 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSH1YOL054W VBA5P36172 582 aa6.52□□□□□ -1.37
PSH1YOL054W GGA2P38817 585 aaKnown RBP6.52□□□□□ -1.37
PSH1YOL054W IRR1P40541 1150 aa6.52□□□□□ -1.37
PSH1YOL054W YFL066CP43538 392 aa6.52□□□□□ -1.37
PSH1YOL054W RSC1P53236 928 aa6.52□□□□□ -1.37
PSH1YOL054W YLR225CQ05948 407 aaKnown RBP6.52□□□□□ -1.37
PSH1YOL054W YIG1Q08956 461 aa6.52□□□□□ -1.37
PSH1YOL054W TY1A-GR1Q12085 440 aa6.52□□□□□ -1.37
PSH1YOL054W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.52□□□□□ -1.37
PSH1YOL054W TY1A-OLQ92392 440 aaKnown RBP6.52□□□□□ -1.37
PSH1YOL054W MRP10O75012 95 aa6.51□□□□□ -1.37
PSH1YOL054W VAS1P07806 1104 aaKnown RBP6.51□□□□□ -1.37
PSH1YOL054W INO1P11986 533 aa6.51□□□□□ -1.37
PSH1YOL054W SYP1P25623 870 aaKnown RBP6.51□□□□□ -1.37
PSH1YOL054W MKK2P32491 506 aa6.51□□□□□ -1.37
PSH1YOL054W RPN12P32496 274 aa6.51□□□□□ -1.37
PSH1YOL054W SEA4P38164 1038 aa6.51□□□□□ -1.37
PSH1YOL054W RKM3P38222 552 aa6.51□□□□□ -1.37
PSH1YOL054W YHR020WP38708 688 aaKnown RBP6.51□□□□□ -1.37
PSH1YOL054W BOI2P39969 1040 aa6.51□□□□□ -1.37
PSH1YOL054W RSM25P40496 264 aa6.51□□□□□ -1.37
PSH1YOL054W ERP6P53198 216 aa6.51□□□□□ -1.37
PSH1YOL054W HAS1Q03532 505 aaKnown RBP6.51□□□□□ -1.37
PSH1YOL054W VPS20Q04272 221 aa6.51□□□□□ -1.37
PSH1YOL054W HRQ1Q05549 1077 aa6.51□□□□□ -1.37
PSH1YOL054W YDR306CQ06640 478 aa6.51□□□□□ -1.37
PSH1YOL054W PPM2Q08282 695 aa6.51□□□□□ -1.37
PSH1YOL054W BIK1P11709 440 aa6.5□□□□□ -1.37
PSH1YOL054W MRP7P12687 371 aa6.5□□□□□ -1.37
PSH1YOL054W KCC4P25389 1037 aa6.5□□□□□ -1.37
PSH1YOL054W ARE1P25628 610 aa6.5□□□□□ -1.37
PSH1YOL054W YKL107WP34251 309 aa6.5□□□□□ -1.37
PSH1YOL054W MOT2P34909 587 aaKnown RBP6.5□□□□□ -1.37
PSH1YOL054W PBY1P38254 753 aa6.5□□□□□ -1.37
PSH1YOL054W MNN1P39106 762 aa6.5□□□□□ -1.37
PSH1YOL054W RSP5P39940 809 aaKnown RBP6.5□□□□□ -1.37
PSH1YOL054W SPO71Q03868 1245 aa6.5□□□□□ -1.37
PSH1YOL054W UTP5Q04177 643 aaKnown RBP6.5□□□□□ -1.37
PSH1YOL054W UTP14Q04500 899 aaKnown RBP6.5□□□□□ -1.37
PSH1YOL054W ESC2Q06340 456 aa6.5□□□□□ -1.37
PSH1YOL054W THI72Q08579 599 aa6.5□□□□□ -1.37
PSH1YOL054W NOP58Q12499 511 aaKnown RBP6.5□□□□□ -1.37
PSH1YOL054W RKM4Q12504 494 aa6.5□□□□□ -1.37
PSH1YOL054W YGR161W-CQ3E744 92 aa6.5□□□□□ -1.37
PSH1YOL054W CIT1P00890 479 aa6.49□□□□□ -1.37
PSH1YOL054W SBP1P10080 294 aaKnown RBP6.49□□□□□ -1.37
PSH1YOL054W PRP9P19736 530 aaKnown RBP6.49□□□□□ -1.37
PSH1YOL054W RPL8BP29453 256 aaKnown RBP6.49□□□□□ -1.37
PSH1YOL054W STE5P32917 917 aa6.49□□□□□ -1.37
PSH1YOL054W MCM7P38132 845 aa6.49□□□□□ -1.37
PSH1YOL054W NEM1P38757 446 aa6.49□□□□□ -1.37
PSH1YOL054W HUL4P40985 892 aa6.49□□□□□ -1.37
PSH1YOL054W SOK2P53438 785 aaPredicted RBP6.49□□□□□ -1.37
PSH1YOL054W EAF1Q06337 982 aa6.49□□□□□ -1.37
PSH1YOL054W FMP25Q08023 583 aa6.49□□□□□ -1.37
PSH1YOL054W AI1P03875 834 aa6.48□□□□□ -1.37
PSH1YOL054W THI4P32318 326 aa6.48□□□□□ -1.37
PSH1YOL054W PIN4P34217 668 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
PSH1YOL054W SLS1P42900 643 aa6.48□□□□□ -1.37
PSH1YOL054W CNN1P43618 361 aa6.48□□□□□ -1.37
PSH1YOL054W CCT8P47079 568 aaKnown RBP6.48□□□□□ -1.37
PSH1YOL054W GCV1P48015 400 aa6.48□□□□□ -1.37
PSH1YOL054W RKM2Q03942 479 aa6.48□□□□□ -1.37
PSH1YOL054W TIF35Q04067 274 aaKnown RBP6.48□□□□□ -1.37
PSH1YOL054W SYT1Q06836 1226 aa6.48□□□□□ -1.37
PSH1YOL054W SLM3Q12093 417 aa6.48□□□□□ -1.37
PSH1YOL054W YLL054CQ12244 843 aa6.48□□□□□ -1.37
PSH1YOL054W DBP5P20449 482 aaKnown RBP6.47□□□□□ -1.37
PSH1YOL054W YJR008WP47085 338 aa6.47□□□□□ -1.37
PSH1YOL054W NRD1P53617 575 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
PSH1YOL054W YNR063WP53749 607 aa6.47□□□□□ -1.37
PSH1YOL054W MDG1P53885 366 aa6.47□□□□□ -1.37
PSH1YOL054W DNM1P54861 757 aa6.47□□□□□ -1.37
PSH1YOL054W ELM1P32801 640 aa6.46□□□□□ -1.38
PSH1YOL054W MIC60P36112 540 aa6.46□□□□□ -1.38
PSH1YOL054W MSH4P40965 878 aaPredicted RBP6.46□□□□□ -1.38
PSH1YOL054W HNT2P49775 206 aa6.46□□□□□ -1.38
PSH1YOL054W MEC3Q02574 474 aa6.46□□□□□ -1.38
PSH1YOL054W RAT1Q02792 1006 aaKnown RBP6.46□□□□□ -1.38
PSH1YOL054W LAP2Q10740 671 aa6.46□□□□□ -1.38
PSH1YOL054W SLP1Q12232 587 aa6.46□□□□□ -1.38
PSH1YOL054W TSR4P25040 408 aa6.45□□□□□ -1.38
PSH1YOL054W PUF4P25339 888 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
PSH1YOL054W SWC3P31376 625 aa6.45□□□□□ -1.38
PSH1YOL054W MPE1P35728 441 aaKnown RBP6.45□□□□□ -1.38
PSH1YOL054W AAP1P37898 856 aaKnown RBP6.45□□□□□ -1.38
PSH1YOL054W ECM21P38167 1117 aaKnown RBP6.45□□□□□ -1.38
PSH1YOL054W REI1P38344 393 aaPredicted RBP6.45□□□□□ -1.38
PSH1YOL054W PAN5P38787 379 aa6.45□□□□□ -1.38
PSH1YOL054W GIP2P40036 548 aa6.45□□□□□ -1.38
PSH1YOL054W ALR2P43553 858 aa6.45□□□□□ -1.38
PSH1YOL054W YGL176CP46945 554 aa6.45□□□□□ -1.38
PSH1YOL054W PFD1P46988 109 aa6.45□□□□□ -1.38
PSH1YOL054W YDL124WQ07551 312 aaKnown RBP6.45□□□□□ -1.38
PSH1YOL054W RIM20Q12033 661 aa6.45□□□□□ -1.38
PSH1YOL054W NCB2Q92317 146 aa6.45□□□□□ -1.38
PSH1YOL054W QCR6P00127 147 aa6.44□□□□□ -1.38
PSH1YOL054W CAN1P04817 590 aa6.44□□□□□ -1.38
PSH1YOL054W RPL19AP0CX82 189 aaKnown RBP6.44□□□□□ -1.38
PSH1YOL054W RPL19BP0CX83 189 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms