RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	OCA6	Q12454	224 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	RMP1	Q12530	201 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	EFT1	P32324	842 aa	Known RBP	4.26	□□□□□ -1.73
ATG2	YNL242W	NGR1	P32831	672 aa	Known RBP	4.26	□□□□□ -1.73
ATG2	YNL242W	PKH3	Q03306	898 aa	Predicted RBP	4.26	□□□□□ -1.73
ATG2	YNL242W	USA1	Q03714	838 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	GYP5	Q12344	894 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	PPR1	P07272	904 aa	Predicted RBP	4.26	□□□□□ -1.73
ATG2	YNL242W	BAS1	P22035	811 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	RIB7	P33312	244 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	RCR1	P38212	213 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	EPS1	P40557	701 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	TMA22	P47089	198 aa	Predicted RBP	4.26	□□□□□ -1.73
ATG2	YNL242W	TAF9	Q05027	157 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	SPN1	Q06505	410 aa	Predicted RBP	4.26	□□□□□ -1.73
ATG2	YNL242W	USO1	P25386	1790 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	HSC82	P15108	705 aa	Known RBP	4.26	□□□□□ -1.73
ATG2	YNL242W	SSA4	P22202	642 aa	Known RBP	4.26	□□□□□ -1.73
ATG2	YNL242W	YKL222C	P35995	705 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	BOI1	P38041	980 aa	Known RBP	4.26	□□□□□ -1.73
ATG2	YNL242W	OSH3	P38713	996 aa	Known RBP	4.26	□□□□□ -1.73
ATG2	YNL242W	REV7	P38927	245 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	TAF1	P46677	1066 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	YGR016W	P53209	190 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	SMD2	Q06217	110 aa	Known RBP	4.26	□□□□□ -1.73
ATG2	YNL242W	YAP7	Q08182	245 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	TAF10	Q12030	206 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	SLM3	Q12093	417 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	TYR1	P20049	452 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	ILV6	P25605	309 aa	Known RBP	4.25	□□□□□ -1.73
ATG2	YNL242W	VID27	P40157	782 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	PDS1	P40316	373 aa	Predicted RBP	4.25	□□□□□ -1.73
ATG2	YNL242W	LSB1	P53281	241 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	ASI1	P54074	624 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	NOB1	Q08444	459 aa	Known RBP	4.25	□□□□□ -1.73
ATG2	YNL242W	YOR296W	Q08748	1289 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	IES3	Q12345	250 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	CLN2	P20438	545 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	OPI1	P21957	404 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	SPC42	P36094	363 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	STN1	P38960	494 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	GTT3	P39996	337 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	YNL320W	P42840	284 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	CCM1	P48237	864 aa	Predicted RBP	4.25	□□□□□ -1.73
ATG2	YNL242W	MSB3	P48566	633 aa	Predicted RBP	4.25	□□□□□ -1.73
ATG2	YNL242W	PEX21	P50091	288 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	PCL10	P53124	433 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	PRP43	P53131	767 aa	Known RBP	4.25	□□□□□ -1.73
ATG2	YNL242W	CSM3	Q04659	317 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	ENO2	P00925	437 aa	Known RBP	4.25	□□□□□ -1.73
ATG2	YNL242W	TUP1	P16649	713 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	GLN1	P32288	370 aa	Known RBP	4.25	□□□□□ -1.73
ATG2	YNL242W	YKL091C	P33324	310 aa	Known RBP	4.25	□□□□□ -1.73
ATG2	YNL242W	ERP5	P38819	212 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	RTS1	P38903	757 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	CUE3	P53137	624 aa	Known RBP	4.25	□□□□□ -1.73
ATG2	YNL242W	RRG1	Q12167	365 aa	Predicted RBP	4.25	□□□□□ -1.73
ATG2	YNL242W	MPH3	P0CE00	602 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	ECM2	P38241	364 aa	Known RBP	4.25	□□□□□ -1.73
ATG2	YNL242W	CCC2	P38995	1004 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	ALG2	P43636	503 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	RNR4	P49723	345 aa	Known RBP	4.25	□□□□□ -1.73
ATG2	YNL242W	CWC21	Q03375	135 aa	Known RBP	4.25	□□□□□ -1.73
ATG2	YNL242W	OSW1	Q08692	278 aa		4.25	□□□□□ -1.73
ATG2	YNL242W	SRV2	P17555	526 aa	Known RBP	4.24	□□□□□ -1.73
ATG2	YNL242W	SPO11	P23179	398 aa		4.24	□□□□□ -1.73
ATG2	YNL242W	SIN4	P32259	974 aa		4.24	□□□□□ -1.73
ATG2	YNL242W	RPC37	P36121	282 aa		4.24	□□□□□ -1.73
ATG2	YNL242W	GRX7	P38068	203 aa		4.24	□□□□□ -1.73
ATG2	YNL242W	RCF1	Q03713	159 aa		4.24	□□□□□ -1.73
ATG2	YNL242W	CWC15	Q03772	175 aa	Known RBP	4.24	□□□□□ -1.73
ATG2	YNL242W	YRF1-1	P0CX20	1796 aa		4.24	□□□□□ -1.73
ATG2	YNL242W	YRF1-5	P0CX21	1796 aa		4.24	□□□□□ -1.73
ATG2	YNL242W	YRF1-8	P0CX22	1796 aa		4.24	□□□□□ -1.73
ATG2	YNL242W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
ATG2	YNL242W	GGA2	P38817	585 aa	Known RBP	4.24	□□□□□ -1.73
ATG2	YNL242W	RBL2	P48606	106 aa	Known RBP	4.24	□□□□□ -1.73
ATG2	YNL242W	TOF1	P53840	1238 aa		4.24	□□□□□ -1.73
ATG2	YNL242W	DNF3	Q12674	1656 aa		4.24	□□□□□ -1.73
ATG2	YNL242W	ARG82	P07250	355 aa		4.24	□□□□□ -1.73
ATG2	YNL242W	PIF1	P07271	859 aa		4.24	□□□□□ -1.73
ATG2	YNL242W	BMH1	P29311	267 aa	Known RBP	4.24	□□□□□ -1.73
ATG2	YNL242W	DAL1	P32375	460 aa		4.24	□□□□□ -1.73
ATG2	YNL242W	MRE11	P32829	692 aa		4.24	□□□□□ -1.73
ATG2	YNL242W	PET112	P33893	541 aa		4.24	□□□□□ -1.73
ATG2	YNL242W	BMH2	P34730	273 aa	Known RBP	4.24	□□□□□ -1.73
ATG2	YNL242W	YKR078W	P36158	585 aa	Known RBP	4.24	□□□□□ -1.73
ATG2	YNL242W	AIM21	P40563	679 aa		4.24	□□□□□ -1.73
ATG2	YNL242W	RLP7	P40693	322 aa	Known RBP	4.24	□□□□□ -1.73
ATG2	YNL242W	GCN20	P43535	752 aa	Known RBP	4.24	□□□□□ -1.73
ATG2	YNL242W	RPA14	P50106	137 aa		4.24	□□□□□ -1.73
ATG2	YNL242W	COS6	P53344	381 aa		4.24	□□□□□ -1.73
ATG2	YNL242W	NOP12	Q08208	459 aa	Known RBP	4.24	□□□□□ -1.73
ATG2	YNL242W	SAC3	P46674	1301 aa		4.24	□□□□□ -1.73
ATG2	YNL242W	RPC53	P25441	422 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	SCS2	P40075	244 aa	Known RBP	4.23	□□□□□ -1.73
ATG2	YNL242W	YTA6	P40328	754 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	ZIP2	P53061	704 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	HDA1	P53973	706 aa		4.23	□□□□□ -1.73
ATG2	YNL242W	YML119W	Q03208	357 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms