RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLF1	YLR117C	WSC3	Q12215	556 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	LEU2	P04173	364 aa	Predicted RBP	5.1	□□□□□ -1.59
CLF1	YLR117C	MTF2	P10849	440 aa		5.1	□□□□□ -1.59
CLF1	YLR117C	DPB2	P24482	689 aa	Predicted RBP	5.1	□□□□□ -1.59
CLF1	YLR117C	SEC21	P32074	935 aa	Known RBP	5.1	□□□□□ -1.59
CLF1	YLR117C	SRB4	P32569	687 aa		5.1	□□□□□ -1.59
CLF1	YLR117C	CIC1	P38779	376 aa	Known RBP	5.1	□□□□□ -1.59
CLF1	YLR117C	HOS2	P53096	452 aa	Predicted RBP	5.1	□□□□□ -1.59
CLF1	YLR117C	SPP1	Q03012	353 aa		5.1	□□□□□ -1.59
CLF1	YLR117C	ATG13	Q06628	738 aa		5.1	□□□□□ -1.59
CLF1	YLR117C	OPY2	Q06810	360 aa		5.1	□□□□□ -1.59
CLF1	YLR117C	HMI1	Q12039	706 aa		5.1	□□□□□ -1.59
CLF1	YLR117C	PYC1	P11154	1178 aa	Known RBP	5.09	□□□□□ -1.59
CLF1	YLR117C	SEN2	P16658	377 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	PWP1	P21304	576 aa	Known RBP	5.09	□□□□□ -1.59
CLF1	YLR117C	YCR051W	P25631	222 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	GDA1	P32621	518 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	YKL222C	P35995	705 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	ADE17	P38009	592 aa	Known RBP	5.09	□□□□□ -1.59
CLF1	YLR117C	VMA22	P38784	181 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	GTT3	P39996	337 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	MDR1	P53258	950 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	USA1	Q03714	838 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	HEL2	Q05580	639 aa	Known RBP	5.09	□□□□□ -1.59
CLF1	YLR117C	HCR1	Q05775	265 aa	Known RBP	5.09	□□□□□ -1.59
CLF1	YLR117C	PIG1	Q06216	648 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	MCP2	Q06567	569 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	BBP1	Q12365	385 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	POM152	P39685	1337 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	CDC31	P06704	161 aa	Known RBP	5.09	□□□□□ -1.59
CLF1	YLR117C	CNA1	P23287	553 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	MRM1	P25270	412 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	RAD57	P25301	460 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	ADY2	P25613	283 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	RAD24	P32641	659 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	YKR015C	P36111	568 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	SHM1	P37292	490 aa	Predicted RBP	5.09	□□□□□ -1.59
CLF1	YLR117C	YBR287W	P38355	427 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	YHR020W	P38708	688 aa	Known RBP	5.09	□□□□□ -1.59
CLF1	YLR117C	TDA3	P38758	523 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	FCY21	P40039	528 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	SHQ1	P40486	507 aa	Predicted RBP	5.09	□□□□□ -1.59
CLF1	YLR117C	IRR1	P40541	1150 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	GCD14	P46959	383 aa	Predicted RBP	5.09	□□□□□ -1.59
CLF1	YLR117C	SWP1	Q02795	286 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	FIN1	Q03898	291 aa		5.09	□□□□□ -1.59
CLF1	YLR117C	SYF1	Q04048	859 aa	Predicted RBP	5.09	□□□□□ -1.59
CLF1	YLR117C	YML082W	Q04533	649 aa	Known RBP	5.09	□□□□□ -1.59
CLF1	YLR117C	GFD1	Q04839	188 aa	Known RBP	5.09	□□□□□ -1.59
CLF1	YLR117C	YML002W	P0CF17	737 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	GCN3	P14741	305 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	CKI1	P20485	582 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	MSB1	P21339	1137 aa	Known RBP	5.08	□□□□□ -1.6
CLF1	YLR117C	BAS1	P22035	811 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	UBA1	P22515	1024 aa	Known RBP	5.08	□□□□□ -1.6
CLF1	YLR117C	MRPL25	P23369	157 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	MSH2	P25847	964 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	SSE1	P32589	693 aa	Known RBP	5.08	□□□□□ -1.6
CLF1	YLR117C	JNM1	P36224	373 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	CCT2	P39076	527 aa	Known RBP	5.08	□□□□□ -1.6
CLF1	YLR117C	ZDS1	P50111	915 aa	Known RBP	5.08	□□□□□ -1.6
CLF1	YLR117C	YNR029C	P53729	429 aa	Known RBP	5.08	□□□□□ -1.6
CLF1	YLR117C	BNI5	P53890	448 aa	Known RBP	5.08	□□□□□ -1.6
CLF1	YLR117C	RPM2	Q02773	1202 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	RTT10	Q08924	1013 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	SSA4	P22202	642 aa	Known RBP	5.08	□□□□□ -1.6
CLF1	YLR117C	CLB2	P24869	491 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	YJU2	P28320	278 aa	Predicted RBP	5.08	□□□□□ -1.6
CLF1	YLR117C	GRX4	P32642	244 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	AFG2	P32794	780 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	DUR3	P33413	735 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	ECM21	P38167	1117 aa	Known RBP	5.08	□□□□□ -1.6
CLF1	YLR117C	SET1	P38827	1080 aa	Known RBP	5.08	□□□□□ -1.6
CLF1	YLR117C	PCF11	P39081	626 aa	Predicted RBP	5.08	□□□□□ -1.6
CLF1	YLR117C	MAM1	P40065	302 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	PDS1	P40316	373 aa	Predicted RBP	5.08	□□□□□ -1.6
CLF1	YLR117C	TDA10	P42938	290 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	NOP9	P47077	666 aa	Known RBP	5.08	□□□□□ -1.6
CLF1	YLR117C	HGH1	P48362	394 aa	Known RBP	5.08	□□□□□ -1.6
CLF1	YLR117C	RFX1	P48743	811 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	YGR122W	P53272	402 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	TPO2	P53283	614 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	YDR179W-A	Q03983	463 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	VTI1	Q04338	217 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	TMA64	Q04600	565 aa	Known RBP	5.08	□□□□□ -1.6
CLF1	YLR117C	YDL073W	Q07454	984 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	RSA1	Q08932	381 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	GET4	Q12125	312 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	YBL113C	Q7M4S9	792 aa		5.08	□□□□□ -1.6
CLF1	YLR117C	VMA4	P22203	233 aa	Known RBP	5.07	□□□□□ -1.6
CLF1	YLR117C	YCR016W	P25617	290 aa	Known RBP	5.07	□□□□□ -1.6
CLF1	YLR117C	PPH3	P32345	308 aa		5.07	□□□□□ -1.6
CLF1	YLR117C	RCN1	P36054	211 aa		5.07	□□□□□ -1.6
CLF1	YLR117C	UGA2	P38067	497 aa		5.07	□□□□□ -1.6
CLF1	YLR117C	PIK1	P39104	1066 aa		5.07	□□□□□ -1.6
CLF1	YLR117C	SIP5	P40210	489 aa	Known RBP	5.07	□□□□□ -1.6
CLF1	YLR117C	RLP7	P40693	322 aa	Known RBP	5.07	□□□□□ -1.6
CLF1	YLR117C	YJR039W	P47107	1121 aa		5.07	□□□□□ -1.6
CLF1	YLR117C	HAM1	P47119	197 aa	Known RBP	5.07	□□□□□ -1.6
CLF1	YLR117C	MON1	P53129	644 aa		5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms