RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W SPC29P33419 253 aa6.82□□□□□ -1.32
SPC42YKL042W BAP2P38084 609 aa6.82□□□□□ -1.32
SPC42YKL042W RTS3P53289 263 aa6.82□□□□□ -1.32
SPC42YKL042W SDA1P53313 767 aaKnown RBP6.82□□□□□ -1.32
SPC42YKL042W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
SPC42YKL042W THI73Q07904 523 aa6.82□□□□□ -1.32
SPC42YKL042W YLL058WQ12198 575 aa6.82□□□□□ -1.32
SPC42YKL042W BI4P03879 638 aa6.81□□□□□ -1.32
SPC42YKL042W YHL012WP38709 493 aa6.81□□□□□ -1.32
SPC42YKL042W AKR1P39010 764 aa6.81□□□□□ -1.32
SPC42YKL042W PIK1P39104 1066 aa6.81□□□□□ -1.32
SPC42YKL042W SEC26P41810 973 aaKnown RBP6.81□□□□□ -1.32
SPC42YKL042W BRE4Q07660 1125 aa6.81□□□□□ -1.32
SPC42YKL042W YLR001CQ07895 862 aa6.81□□□□□ -1.32
SPC42YKL042W MDM38Q08179 573 aa6.81□□□□□ -1.32
SPC42YKL042W CDC9P04819 755 aa6.8□□□□□ -1.32
SPC42YKL042W YKR078WP36158 585 aaKnown RBP6.8□□□□□ -1.32
SPC42YKL042W GYP8P43570 497 aa6.8□□□□□ -1.32
SPC42YKL042W ATG36P46983 293 aa6.8□□□□□ -1.32
SPC42YKL042W RCL1Q08096 367 aaPredicted RBP6.8□□□□□ -1.32
SPC42YKL042W SRD1P09007 221 aa6.79□□□□□ -1.32
SPC42YKL042W MRC1P25588 1096 aa6.79□□□□□ -1.32
SPC42YKL042W TSL1P38427 1098 aaKnown RBP6.79□□□□□ -1.32
SPC42YKL042W YER158CP40095 573 aa6.79□□□□□ -1.32
SPC42YKL042W MMM1P41800 426 aa6.79□□□□□ -1.32
SPC42YKL042W GYP7P48365 746 aa6.79□□□□□ -1.32
SPC42YKL042W DAM1P53267 343 aa6.79□□□□□ -1.32
SPC42YKL042W YGR283CP53336 341 aaPredicted RBP6.79□□□□□ -1.32
SPC42YKL042W UME1Q03010 460 aa6.79□□□□□ -1.32
SPC42YKL042W YVC1Q12324 675 aa6.79□□□□□ -1.32
SPC42YKL042W RAD18P10862 487 aa6.78□□□□□ -1.32
SPC42YKL042W SRO9P25567 434 aaKnown RBP6.78□□□□□ -1.32
SPC42YKL042W WHI3P34761 661 aaKnown RBP6.78□□□□□ -1.32
SPC42YKL042W EMC3P36039 253 aa6.78□□□□□ -1.32
SPC42YKL042W PAF1P38351 445 aa6.78□□□□□ -1.32
SPC42YKL042W NIT3P49954 291 aa6.78□□□□□ -1.32
SPC42YKL042W NBA1Q08229 501 aaKnown RBP6.78□□□□□ -1.32
SPC42YKL042W ENV7Q12003 364 aa6.78□□□□□ -1.32
SPC42YKL042W CYC7P00045 113 aa6.77□□□□□ -1.33
SPC42YKL042W SAM35P14693 329 aa6.77□□□□□ -1.33
SPC42YKL042W CDC48P25694 835 aaKnown RBP6.77□□□□□ -1.33
SPC42YKL042W MDL2P33311 773 aa6.77□□□□□ -1.33
SPC42YKL042W GIC1P38785 314 aa6.77□□□□□ -1.33
SPC42YKL042W RRT14P40470 206 aa6.77□□□□□ -1.33
SPC42YKL042W CIT3P43635 486 aa6.77□□□□□ -1.33
SPC42YKL042W SRT1Q03175 343 aa6.77□□□□□ -1.33
SPC42YKL042W RSB1Q08417 382 aa6.77□□□□□ -1.33
SPC42YKL042W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
SPC42YKL042W STO1P34160 861 aaKnown RBP6.76□□□□□ -1.33
SPC42YKL042W YEL1P34225 687 aa6.76□□□□□ -1.33
SPC42YKL042W MTC2P34246 357 aa6.76□□□□□ -1.33
SPC42YKL042W GRX7P38068 203 aa6.76□□□□□ -1.33
SPC42YKL042W YBR238CP38330 731 aaKnown RBP6.76□□□□□ -1.33
SPC42YKL042W MGS1P40151 587 aa6.76□□□□□ -1.33
SPC42YKL042W MTC3P53077 123 aa6.76□□□□□ -1.33
SPC42YKL042W FOL1P53848 824 aa6.76□□□□□ -1.33
SPC42YKL042W RSC3Q06639 885 aa6.76□□□□□ -1.33
SPC42YKL042W YOR059CQ08448 450 aaKnown RBP6.76□□□□□ -1.33
SPC42YKL042W MET7Q08645 548 aa6.76□□□□□ -1.33
SPC42YKL042W FAP7Q12055 197 aaPredicted RBP6.76□□□□□ -1.33
SPC42YKL042W ACE2P21192 770 aa6.75□□□□□ -1.33
SPC42YKL042W FUN30P31380 1131 aa6.75□□□□□ -1.33
SPC42YKL042W NPP2P39997 493 aa6.75□□□□□ -1.33
SPC42YKL042W ATP25Q03153 612 aa6.75□□□□□ -1.33
SPC42YKL042W YDR514CQ04408 483 aa6.75□□□□□ -1.33
SPC42YKL042W YPR196WQ06595 470 aa6.75□□□□□ -1.33
SPC42YKL042W TMA17Q12513 150 aa6.75□□□□□ -1.33
SPC42YKL042W MPH2P0CD99 609 aa6.74□□□□□ -1.33
SPC42YKL042W PCL2P25693 308 aa6.74□□□□□ -1.33
SPC42YKL042W TYS1P36421 394 aaKnown RBP6.74□□□□□ -1.33
SPC42YKL042W GPG1P53130 126 aa6.74□□□□□ -1.33
SPC42YKL042W RSC58Q07979 502 aa6.74□□□□□ -1.33
SPC42YKL042W YOL057WQ08225 711 aa6.74□□□□□ -1.33
SPC42YKL042W CAF16P43569 289 aa6.73□□□□□ -1.33
SPC42YKL042W TY4A-JP47023 414 aa6.73□□□□□ -1.33
SPC42YKL042W YKE2P52553 114 aa6.73□□□□□ -1.33
SPC42YKL042W MET13P53128 600 aa6.73□□□□□ -1.33
SPC42YKL042W SFB2P53953 876 aa6.73□□□□□ -1.33
SPC42YKL042W RCM1P53972 490 aa6.73□□□□□ -1.33
SPC42YKL042W OSW2Q12202 724 aa6.73□□□□□ -1.33
SPC42YKL042W SVS1Q12254 260 aa6.73□□□□□ -1.33
SPC42YKL042W SFL1P20134 766 aa6.72□□□□□ -1.33
SPC42YKL042W PER1P25625 357 aa6.72□□□□□ -1.33
SPC42YKL042W HFM1P51979 1187 aa6.72□□□□□ -1.33
SPC42YKL042W SDH1Q00711 640 aa6.72□□□□□ -1.33
SPC42YKL042W REH1Q06709 432 aa6.72□□□□□ -1.33
SPC42YKL042W RFA1P22336 621 aaKnown RBP6.71□□□□□ -1.34
SPC42YKL042W ELM1P32801 640 aa6.71□□□□□ -1.34
SPC42YKL042W MCD4P36051 919 aa6.71□□□□□ -1.34
SPC42YKL042W HFD1Q04458 532 aa6.71□□□□□ -1.34
SPC42YKL042W COG8Q04632 607 aa6.71□□□□□ -1.34
SPC42YKL042W TOP1P04786 769 aa6.7□□□□□ -1.34
SPC42YKL042W MSB1P21339 1137 aaKnown RBP6.7□□□□□ -1.34
SPC42YKL042W RPC82P32349 654 aa6.7□□□□□ -1.34
SPC42YKL042W HOG1P32485 435 aa6.7□□□□□ -1.34
SPC42YKL042W AIM26P32858 118 aa6.7□□□□□ -1.34
SPC42YKL042W NOP2P40991 618 aaKnown RBP6.7□□□□□ -1.34
SPC42YKL042W YJR120WP47157 116 aa6.7□□□□□ -1.34
SPC42YKL042W SNP1Q00916 300 aaPredicted RBP6.7□□□□□ -1.34
SPC42YKL042W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms