RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W MRPL7P36519 292 aa5.5□□□□□ -1.53
VPS29YHR012W BRN1P38170 754 aa5.5□□□□□ -1.53
VPS29YHR012W KRI1P42846 591 aaKnown RBP5.5□□□□□ -1.53
VPS29YHR012W ALT2P52892 507 aa5.5□□□□□ -1.53
VPS29YHR012W SMC5Q08204 1093 aa5.5□□□□□ -1.53
VPS29YHR012W CEX1Q12453 761 aa5.5□□□□□ -1.53
VPS29YHR012W PGA3Q12746 312 aaKnown RBP5.5□□□□□ -1.53
VPS29YHR012W RIF1P29539 1916 aa5.49□□□□□ -1.53
VPS29YHR012W STI1P15705 589 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
VPS29YHR012W CDC48P25694 835 aaKnown RBP5.49□□□□□ -1.53
VPS29YHR012W DRE2P36152 348 aa5.49□□□□□ -1.53
VPS29YHR012W RDH54P38086 958 aa5.49□□□□□ -1.53
VPS29YHR012W RXT2P38255 430 aa5.49□□□□□ -1.53
VPS29YHR012W AKR1P39010 764 aa5.49□□□□□ -1.53
VPS29YHR012W OPT1P40897 799 aa5.49□□□□□ -1.53
VPS29YHR012W CTR1P49573 406 aa5.49□□□□□ -1.53
VPS29YHR012W YLR455WQ06188 304 aa5.49□□□□□ -1.53
VPS29YHR012W SMD2Q06217 110 aaKnown RBP5.49□□□□□ -1.53
VPS29YHR012W WHI4Q07655 649 aaKnown RBP5.49□□□□□ -1.53
VPS29YHR012W RAD59Q12223 238 aa5.49□□□□□ -1.53
VPS29YHR012W URK1P27515 501 aa5.48□□□□□ -1.53
VPS29YHR012W EFT1P32324 842 aaKnown RBP5.48□□□□□ -1.53
VPS29YHR012W ASF1P32447 279 aa5.48□□□□□ -1.53
VPS29YHR012W FBP26P32604 452 aa5.48□□□□□ -1.53
VPS29YHR012W UBP11P36026 717 aa5.48□□□□□ -1.53
VPS29YHR012W SLX1P38324 304 aa5.48□□□□□ -1.53
VPS29YHR012W FYV10P40492 516 aa5.48□□□□□ -1.53
VPS29YHR012W PCI8P40512 444 aa5.48□□□□□ -1.53
VPS29YHR012W GCV2P49095 1034 aa5.48□□□□□ -1.53
VPS29YHR012W YKE2P52553 114 aa5.48□□□□□ -1.53
VPS29YHR012W YGL138CP53122 345 aa5.48□□□□□ -1.53
VPS29YHR012W RET3P53600 189 aa5.48□□□□□ -1.53
VPS29YHR012W YNL134CP53912 376 aaKnown RBP5.48□□□□□ -1.53
VPS29YHR012W ARP5P53946 755 aa5.48□□□□□ -1.53
VPS29YHR012W YNL034WP53963 612 aa5.48□□□□□ -1.53
VPS29YHR012W YNL018CP53976 612 aa5.48□□□□□ -1.53
VPS29YHR012W MFM1Q02783 413 aa5.48□□□□□ -1.53
VPS29YHR012W MUK1Q02866 612 aa5.48□□□□□ -1.53
VPS29YHR012W CLN3P13365 580 aa5.47□□□□□ -1.53
VPS29YHR012W ESS1P22696 170 aa5.47□□□□□ -1.53
VPS29YHR012W SUV3P32580 737 aa5.47□□□□□ -1.53
VPS29YHR012W ATG19P35193 415 aa5.47□□□□□ -1.53
VPS29YHR012W ACF4P47129 309 aa5.47□□□□□ -1.53
VPS29YHR012W INP52P50942 1183 aa5.47□□□□□ -1.53
VPS29YHR012W DSE4P53753 1117 aa5.47□□□□□ -1.53
VPS29YHR012W YPR109WQ06104 294 aa5.47□□□□□ -1.53
VPS29YHR012W RLF2Q12495 606 aa5.47□□□□□ -1.53
VPS29YHR012W PCD1Q12524 340 aa5.47□□□□□ -1.53
VPS29YHR012W ILV1P00927 576 aaKnown RBP5.46□□□□□ -1.54
VPS29YHR012W WHI2P12611 486 aa5.46□□□□□ -1.54
VPS29YHR012W THR4P16120 514 aaKnown RBP5.46□□□□□ -1.54
VPS29YHR012W SWI4P25302 1093 aaKnown RBP5.46□□□□□ -1.54
VPS29YHR012W YAP1801P38856 637 aa5.46□□□□□ -1.54
VPS29YHR012W EAF5P39995 279 aa5.46□□□□□ -1.54
VPS29YHR012W ESL1P40456 1118 aa5.46□□□□□ -1.54
VPS29YHR012W HUL4P40985 892 aa5.46□□□□□ -1.54
VPS29YHR012W GPD2P41911 440 aaKnown RBP5.46□□□□□ -1.54
VPS29YHR012W VID30P53076 958 aa5.46□□□□□ -1.54
VPS29YHR012W ART5P53244 586 aaKnown RBP5.46□□□□□ -1.54
VPS29YHR012W NAF1P53919 492 aaKnown RBP5.46□□□□□ -1.54
VPS29YHR012W ECM23Q02710 187 aa5.46□□□□□ -1.54
VPS29YHR012W GIS4Q04233 774 aa5.46□□□□□ -1.54
VPS29YHR012W LCD1Q04377 747 aa5.46□□□□□ -1.54
VPS29YHR012W SLK19Q08581 821 aaKnown RBP5.46□□□□□ -1.54
VPS29YHR012W MOD5P07884 428 aa5.45□□□□□ -1.54
VPS29YHR012W MATALPHA2P0CY08 210 aa5.45□□□□□ -1.54
VPS29YHR012W HMLALPHA2P0CY09 210 aa5.45□□□□□ -1.54
VPS29YHR012W HCA4P20448 770 aaKnown RBP5.45□□□□□ -1.54
VPS29YHR012W CBP3P21560 335 aa5.45□□□□□ -1.54
VPS29YHR012W GSY1P23337 708 aa5.45□□□□□ -1.54
VPS29YHR012W STB5P38699 743 aa5.45□□□□□ -1.54
VPS29YHR012W YHL026CP38740 315 aa5.45□□□□□ -1.54
VPS29YHR012W FIS1P40515 155 aa5.45□□□□□ -1.54
VPS29YHR012W VID28P40547 921 aa5.45□□□□□ -1.54
VPS29YHR012W YJR115WP47152 169 aa5.45□□□□□ -1.54
VPS29YHR012W HXT17P53631 564 aa5.45□□□□□ -1.54
VPS29YHR012W AIM33Q04516 312 aa5.45□□□□□ -1.54
VPS29YHR012W SDH5Q08230 162 aa5.45□□□□□ -1.54
VPS29YHR012W TIP41Q12199 356 aa5.45□□□□□ -1.54
VPS29YHR012W OSW2Q12202 724 aa5.45□□□□□ -1.54
VPS29YHR012W MNL2Q12205 849 aa5.45□□□□□ -1.54
VPS29YHR012W PRC1P00729 532 aa5.44□□□□□ -1.54
VPS29YHR012W DED1P06634 604 aaKnown RBP5.44□□□□□ -1.54
VPS29YHR012W SRD1P09007 221 aa5.44□□□□□ -1.54
VPS29YHR012W RGR1P19263 1082 aa5.44□□□□□ -1.54
VPS29YHR012W VPS35P34110 944 aa5.44□□□□□ -1.54
VPS29YHR012W RPN10P38886 268 aaKnown RBP5.44□□□□□ -1.54
VPS29YHR012W GAA1P39012 614 aa5.44□□□□□ -1.54
VPS29YHR012W HXT13P39924 564 aa5.44□□□□□ -1.54
VPS29YHR012W FAF1P40546 346 aaPredicted RBP5.44□□□□□ -1.54
VPS29YHR012W COQ9Q05779 260 aa5.44□□□□□ -1.54
VPS29YHR012W PSK2Q08217 1101 aa5.44□□□□□ -1.54
VPS29YHR012W NBL1Q3E7Y6 73 aa5.44□□□□□ -1.54
VPS29YHR012W SUP45P12385 437 aaKnown RBP5.43□□□□□ -1.54
VPS29YHR012W TCP1P12612 559 aaKnown RBP5.43□□□□□ -1.54
VPS29YHR012W KEX2P13134 814 aa5.43□□□□□ -1.54
VPS29YHR012W ADE2P21264 571 aaKnown RBP5.43□□□□□ -1.54
VPS29YHR012W SEC21P32074 935 aaKnown RBP5.43□□□□□ -1.54
VPS29YHR012W YHL017WP38745 532 aa5.43□□□□□ -1.54
VPS29YHR012W YHR202WP38887 602 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms