RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W SEC5P89102 971 aa8.59□□□□□ -1.03
SHC1YER096W ROD1Q02805 837 aa8.59□□□□□ -1.03
SHC1YER096W SPO75Q07798 868 aa8.59□□□□□ -1.03
SHC1YER096W GPI13Q07830 1017 aa8.59□□□□□ -1.03
SHC1YER096W MSC6Q08818 692 aaKnown RBP8.59□□□□□ -1.03
SHC1YER096W PCK1P10963 549 aa8.58□□□□□ -1.04
SHC1YER096W YSC83P32792 385 aa8.58□□□□□ -1.04
SHC1YER096W TVP38P36164 337 aa8.58□□□□□ -1.04
SHC1YER096W PCH2P38126 564 aa8.58□□□□□ -1.04
SHC1YER096W LCB2P40970 561 aa8.58□□□□□ -1.04
SHC1YER096W TAM41P53230 385 aa8.58□□□□□ -1.04
SHC1YER096W FAL1Q12099 399 aaKnown RBP8.58□□□□□ -1.04
SHC1YER096W TRM11Q12463 433 aa8.58□□□□□ -1.04
SHC1YER096W TIF6Q12522 245 aaKnown RBP8.58□□□□□ -1.04
SHC1YER096W MAK16P10962 306 aaPredicted RBP8.57□□□□□ -1.04
SHC1YER096W TUP1P16649 713 aa8.57□□□□□ -1.04
SHC1YER096W PRE10P21242 288 aaKnown RBP RIP-Chip data8.57□□□□□ -1.04not detected
SHC1YER096W KIN82P25341 720 aa8.57□□□□□ -1.04
SHC1YER096W SEC8P32855 1065 aa8.57□□□□□ -1.04
SHC1YER096W RGT1P32862 1170 aa8.57□□□□□ -1.04
SHC1YER096W SAP190P36123 1033 aa8.57□□□□□ -1.04
SHC1YER096W RSC30P38781 883 aa8.57□□□□□ -1.04
SHC1YER096W YEL025CP39991 1188 aa8.57□□□□□ -1.04
SHC1YER096W SAD1P43589 448 aa8.57□□□□□ -1.04
SHC1YER096W VPS53P47061 822 aa8.57□□□□□ -1.04
SHC1YER096W TAD1P53065 400 aa8.57□□□□□ -1.04
SHC1YER096W HUL5P53119 910 aa8.57□□□□□ -1.04
SHC1YER096W CAF130P53280 1122 aaPredicted RBP8.57□□□□□ -1.04
SHC1YER096W SVF1Q05515 481 aa8.57□□□□□ -1.04
SHC1YER096W COQ9Q05779 260 aa8.57□□□□□ -1.04
SHC1YER096W DBP5P20449 482 aaKnown RBP8.56□□□□□ -1.04
SHC1YER096W CDC27P38042 758 aa8.56□□□□□ -1.04
SHC1YER096W HMF1P40037 129 aaKnown RBP8.56□□□□□ -1.04
SHC1YER096W VFA1P40080 203 aa8.56□□□□□ -1.04
SHC1YER096W OSW7P43611 510 aa8.56□□□□□ -1.04
SHC1YER096W ATG1P53104 897 aa8.56□□□□□ -1.04
SHC1YER096W UME1Q03010 460 aa8.56□□□□□ -1.04
SHC1YER096W COG4Q06096 861 aa8.56□□□□□ -1.04
SHC1YER096W CUR1Q06469 252 aa8.56□□□□□ -1.04
SHC1YER096W NOC3Q07896 663 aaPredicted RBP8.56□□□□□ -1.04
SHC1YER096W ATG9Q12142 997 aa8.56□□□□□ -1.04
SHC1YER096W MED1Q12321 566 aa8.56□□□□□ -1.04
SHC1YER096W RIF1P29539 1916 aa8.56□□□□□ -1.04
SHC1YER096W PHO8P11491 566 aa8.55□□□□□ -1.04
SHC1YER096W POX1P13711 748 aa8.55□□□□□ -1.04
SHC1YER096W SPO12P17123 173 aa8.55□□□□□ -1.04
SHC1YER096W RRP43P25359 394 aaPredicted RBP8.55□□□□□ -1.04
SHC1YER096W IRE1P32361 1115 aa8.55□□□□□ -1.04
SHC1YER096W BCS1P32839 456 aa8.55□□□□□ -1.04
SHC1YER096W MNN4P36044 1178 aa8.55□□□□□ -1.04
SHC1YER096W ATG3P40344 310 aa8.55□□□□□ -1.04
SHC1YER096W CCM1P48237 864 aaPredicted RBP8.55□□□□□ -1.04
SHC1YER096W BRE5P53741 515 aaKnown RBP8.55□□□□□ -1.04
SHC1YER096W HMI1Q12039 706 aa8.55□□□□□ -1.04
SHC1YER096W MAS2P11914 482 aa8.54□□□□□ -1.04
SHC1YER096W RPC53P25441 422 aa8.54□□□□□ -1.04
SHC1YER096W NAM7P30771 971 aaKnown RBP8.54□□□□□ -1.04
SHC1YER096W MRF1P30775 413 aaPredicted RBP8.54□□□□□ -1.04
SHC1YER096W KSP1P38691 1029 aaKnown RBP8.54□□□□□ -1.04
SHC1YER096W DUS1P53759 423 aaKnown RBP8.54□□□□□ -1.04
SHC1YER096W RRP6Q12149 733 aaKnown RBP8.54□□□□□ -1.04
SHC1YER096W YLL058WQ12198 575 aa8.54□□□□□ -1.04
SHC1YER096W PPR1P07272 904 aaPredicted RBP8.54□□□□□ -1.04
SHC1YER096W SSB1P11484 613 aaKnown RBP8.54□□□□□ -1.04
SHC1YER096W CCC2P38995 1004 aa8.54□□□□□ -1.04
SHC1YER096W MXR1P40029 184 aa8.54□□□□□ -1.04
SHC1YER096W SSB2P40150 613 aaKnown RBP8.54□□□□□ -1.04
SHC1YER096W IES1P43579 692 aa8.54□□□□□ -1.04
SHC1YER096W FYV8P46949 817 aaKnown RBP8.54□□□□□ -1.04
SHC1YER096W ENV11P53246 860 aa8.54□□□□□ -1.04
SHC1YER096W RTT102P53330 157 aa8.54□□□□□ -1.04
SHC1YER096W IES4Q08561 116 aa8.54□□□□□ -1.04
SHC1YER096W MET7Q08645 548 aa8.54□□□□□ -1.04
SHC1YER096W CDC53Q12018 815 aaKnown RBP8.54□□□□□ -1.04
SHC1YER096W APL1P27351 700 aa8.53□□□□□ -1.04
SHC1YER096W COT1P32798 439 aa8.53□□□□□ -1.04
SHC1YER096W YKL023WP36103 277 aaKnown RBP8.53□□□□□ -1.04
SHC1YER096W UBP13P38187 747 aa8.53□□□□□ -1.04
SHC1YER096W EAF5P39995 279 aa8.53□□□□□ -1.04
SHC1YER096W VID30P53076 958 aa8.53□□□□□ -1.04
SHC1YER096W ERG5P54781 538 aa8.53□□□□□ -1.04
SHC1YER096W TIM8P57744 87 aa8.53□□□□□ -1.04
SHC1YER096W YLR287CQ05881 355 aa8.53□□□□□ -1.04
SHC1YER096W MLH2Q07980 695 aa8.53□□□□□ -1.04
SHC1YER096W SMC5Q08204 1093 aa8.53□□□□□ -1.04
SHC1YER096W LAA1P39526 2014 aa8.52□□□□□ -1.05
SHC1YER096W DBP1P24784 617 aaKnown RBP8.52□□□□□ -1.05
SHC1YER096W EFT1P32324 842 aaKnown RBP8.52□□□□□ -1.05
SHC1YER096W CDC11P32458 415 aa8.52□□□□□ -1.05
SHC1YER096W XRS2P33301 854 aa8.52□□□□□ -1.05
SHC1YER096W ATG19P35193 415 aa8.52□□□□□ -1.05
SHC1YER096W EBP2P36049 427 aaKnown RBP8.52□□□□□ -1.05
SHC1YER096W EFM2P38347 419 aa8.52□□□□□ -1.05
SHC1YER096W SHQ1P40486 507 aaPredicted RBP8.52□□□□□ -1.05
SHC1YER096W YNL146WP53906 100 aa8.52□□□□□ -1.05
SHC1YER096W YCG1Q06680 1035 aa8.52□□□□□ -1.05
SHC1YER096W CHS2P14180 963 aa8.51□□□□□ -1.05
SHC1YER096W SSD1P24276 1250 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05not detected
SHC1YER096W KTR2P33550 425 aa8.51□□□□□ -1.05
SHC1YER096W AFG3P39925 761 aa8.51□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms