RNA–Protein interactions for RNA: YDL130W

RPP1B, Transcript of Ribosomal protein P1 beta, yeastyeast

Gene RPP1B, Length 321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP1BYDL130W SEC5P89102 971 aa17.24■□□□□ 0.35
RPP1BYDL130W OSW2Q12202 724 aa17.24■□□□□ 0.35
RPP1BYDL130W VPS24P36095 224 aaKnown RBP17.23■□□□□ 0.35
RPP1BYDL130W ERC1P38767 581 aa17.23■□□□□ 0.35
RPP1BYDL130W IES4Q08561 116 aa17.23■□□□□ 0.35
RPP1BYDL130W HIR1P32479 840 aa17.22■□□□□ 0.35
RPP1BYDL130W TMT1P32643 299 aa17.22■□□□□ 0.35
RPP1BYDL130W VPS35P34110 944 aa17.22■□□□□ 0.35
RPP1BYDL130W TOF1P53840 1238 aa17.22■□□□□ 0.35
RPP1BYDL130W BUD2P33314 1104 aa17.21■□□□□ 0.35
RPP1BYDL130W UBP13P38187 747 aa17.2■□□□□ 0.34
RPP1BYDL130W GCV2P49095 1034 aa17.2■□□□□ 0.34
RPP1BYDL130W MCM6P53091 1017 aaKnown RBP17.2■□□□□ 0.34
RPP1BYDL130W CAF130P53280 1122 aaPredicted RBP17.2■□□□□ 0.34
RPP1BYDL130W YNL146WP53906 100 aa17.2■□□□□ 0.34
RPP1BYDL130W DPH2P32461 534 aa17.19■□□□□ 0.34
RPP1BYDL130W ELM1P32801 640 aa17.19■□□□□ 0.34
RPP1BYDL130W CCT5P40413 562 aaKnown RBP17.19■□□□□ 0.34
RPP1BYDL130W SKY1Q03656 742 aa17.19■□□□□ 0.34
RPP1BYDL130W MAG2Q06436 670 aaKnown RBP17.19■□□□□ 0.34
RPP1BYDL130W YDL057WQ07379 328 aa17.19■□□□□ 0.34
RPP1BYDL130W RIF1P29539 1916 aa17.18■□□□□ 0.34
RPP1BYDL130W PCK1P10963 549 aa17.18■□□□□ 0.34
RPP1BYDL130W YSC83P32792 385 aa17.18■□□□□ 0.34
RPP1BYDL130W YNL134CP53912 376 aaKnown RBP17.18■□□□□ 0.34
RPP1BYDL130W CUR1Q06469 252 aa17.18■□□□□ 0.34
RPP1BYDL130W DDP1Q99321 188 aaKnown RBP17.18■□□□□ 0.34
RPP1BYDL130W ADE2P21264 571 aaKnown RBP17.17■□□□□ 0.34
RPP1BYDL130W NAM7P30771 971 aaKnown RBP17.17■□□□□ 0.34
RPP1BYDL130W YFL034WP43564 1073 aa17.17■□□□□ 0.34
RPP1BYDL130W YDR090CQ03193 310 aa17.17■□□□□ 0.34
RPP1BYDL130W PCD1Q12524 340 aa17.17■□□□□ 0.34
RPP1BYDL130W KEX1P09620 729 aa17.16■□□□□ 0.34
RPP1BYDL130W YKT6P36015 200 aaKnown RBP17.16■□□□□ 0.34
RPP1BYDL130W CUL3P53202 744 aa17.16■□□□□ 0.34
RPP1BYDL130W YPL277CQ08989 487 aa17.16■□□□□ 0.34
RPP1BYDL130W RPL22AP05749 121 aaKnown RBP17.15■□□□□ 0.34
RPP1BYDL130W SSD1P24276 1250 aaKnown RBP RIP-Chip data17.15■□□□□ 0.34not detected
RPP1BYDL130W SAC6P32599 642 aaKnown RBP17.15■□□□□ 0.34
RPP1BYDL130W TAM41P53230 385 aa17.15■□□□□ 0.34
RPP1BYDL130W DOT1Q04089 582 aaKnown RBP17.15■□□□□ 0.34
RPP1BYDL130W TLG2Q08144 397 aa17.15■□□□□ 0.34
RPP1BYDL130W VID24P38263 362 aa17.14■□□□□ 0.33
RPP1BYDL130W UBX7P38349 436 aa17.14■□□□□ 0.33
RPP1BYDL130W LAM5P43560 674 aa17.14■□□□□ 0.33
RPP1BYDL130W YPT11P48559 417 aa17.14■□□□□ 0.33
RPP1BYDL130W ALT2P52892 507 aa17.14■□□□□ 0.33
RPP1BYDL130W MNP1P53163 194 aaPredicted RBP17.14■□□□□ 0.33
RPP1BYDL130W SKG6P32900 734 aaPredicted RBP17.13■□□□□ 0.33
RPP1BYDL130W YAP1801P38856 637 aa17.13■□□□□ 0.33
RPP1BYDL130W VTC3Q02725 835 aa17.13■□□□□ 0.33
RPP1BYDL130W ECM7Q06200 448 aa17.13■□□□□ 0.33
RPP1BYDL130W TIF1P10081 395 aaKnown RBP17.12■□□□□ 0.33
RPP1BYDL130W DAL7P21826 554 aa17.12■□□□□ 0.33
RPP1BYDL130W MNN4P36044 1178 aa17.12■□□□□ 0.33
RPP1BYDL130W YHL026CP38740 315 aa17.12■□□□□ 0.33
RPP1BYDL130W SNF7P39929 240 aaKnown RBP17.12■□□□□ 0.33
RPP1BYDL130W YER130CP39959 443 aa17.12■□□□□ 0.33
RPP1BYDL130W CIR1P42940 261 aa17.12■□□□□ 0.33
RPP1BYDL130W VMS1Q04311 632 aaKnown RBP17.12■□□□□ 0.33
RPP1BYDL130W APC11Q12157 165 aa17.12■□□□□ 0.33
RPP1BYDL130W UBR2Q07963 1872 aa17.12■□□□□ 0.33
RPP1BYDL130W PHO8P11491 566 aa17.11■□□□□ 0.33
RPP1BYDL130W MSD1P15179 658 aaKnown RBP17.11■□□□□ 0.33
RPP1BYDL130W SLX1P38324 304 aa17.11■□□□□ 0.33
RPP1BYDL130W DJP1P40564 432 aa17.11■□□□□ 0.33
RPP1BYDL130W NBP1P52919 319 aaPredicted RBP17.11■□□□□ 0.33
RPP1BYDL130W ENV11P53246 860 aa17.11■□□□□ 0.33
RPP1BYDL130W ETT1Q08421 412 aaKnown RBP17.11■□□□□ 0.33
RPP1BYDL130W ADE4P04046 510 aaKnown RBP17.1■□□□□ 0.33
RPP1BYDL130W GPA1P08539 472 aa17.1■□□□□ 0.33
RPP1BYDL130W GLN3P18494 730 aa17.1■□□□□ 0.33
RPP1BYDL130W YEL1P34225 687 aa17.1■□□□□ 0.33
RPP1BYDL130W MRX3P38172 270 aa17.1■□□□□ 0.33
RPP1BYDL130W ESL1P40456 1118 aa17.1■□□□□ 0.33
RPP1BYDL130W OPT1P40897 799 aa17.1■□□□□ 0.33
RPP1BYDL130W CCM1P48237 864 aaPredicted RBP17.1■□□□□ 0.33
RPP1BYDL130W SHE10P53075 577 aa17.1■□□□□ 0.33
RPP1BYDL130W HAP5Q02516 242 aa17.1■□□□□ 0.33
RPP1BYDL130W EMI2Q04409 500 aaKnown RBP17.1■□□□□ 0.33
RPP1BYDL130W MRF1P30775 413 aaPredicted RBP17.09■□□□□ 0.33
RPP1BYDL130W VID30P53076 958 aa17.09■□□□□ 0.33
RPP1BYDL130W TRS130Q03660 1102 aa17.09■□□□□ 0.33
RPP1BYDL130W YLR455WQ06188 304 aa17.09■□□□□ 0.33
RPP1BYDL130W ZPS1Q12512 249 aa17.09■□□□□ 0.33
RPP1BYDL130W BIM1P40013 344 aa17.08■□□□□ 0.32
RPP1BYDL130W HUL4P40985 892 aa17.08■□□□□ 0.32
RPP1BYDL130W AIM44Q99299 758 aa17.08■□□□□ 0.32
RPP1BYDL130W SPT2P06843 333 aaPredicted RBP17.07■□□□□ 0.32
RPP1BYDL130W YKL091CP33324 310 aaKnown RBP17.07■□□□□ 0.32
RPP1BYDL130W RSM25P40496 264 aa17.07■□□□□ 0.32
RPP1BYDL130W ORC5P50874 479 aa17.07■□□□□ 0.32
RPP1BYDL130W TCO89Q08921 799 aa17.07■□□□□ 0.32
RPP1BYDL130W YPL216WQ08964 1102 aa17.07■□□□□ 0.32
RPP1BYDL130W COX4P04037 155 aa17.06■□□□□ 0.32
RPP1BYDL130W TOM70P07213 617 aaKnown RBP17.06■□□□□ 0.32
RPP1BYDL130W BUD16P39988 312 aa17.06■□□□□ 0.32
RPP1BYDL130W SCD6P45978 349 aaKnown RBP RIP-Chip data17.06■□□□□ 0.32not detected
RPP1BYDL130W RPT1P33299 467 aaKnown RBP17.05■□□□□ 0.32
RPP1BYDL130W CSE2P33308 149 aa17.05■□□□□ 0.32
Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms