RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN6	YDL097C	YNR061C	P53747	219 aa		5.26	□□□□□ -1.57
RPN6	YDL097C	RPN7	Q06103	429 aa	Known RBP	5.26	□□□□□ -1.57
RPN6	YDL097C	RTT109	Q07794	436 aa		5.26	□□□□□ -1.57
RPN6	YDL097C	TY1A-BL	Q12266	440 aa		5.26	□□□□□ -1.57
RPN6	YDL097C	RIF1	P29539	1916 aa		5.26	□□□□□ -1.57
RPN6	YDL097C	TY1B-A	O13527	1196 aa	Known RBP	5.25	□□□□□ -1.57
RPN6	YDL097C	KIN82	P25341	720 aa		5.25	□□□□□ -1.57
RPN6	YDL097C	LEU5	P38702	357 aa		5.25	□□□□□ -1.57
RPN6	YDL097C	BIM1	P40013	344 aa		5.25	□□□□□ -1.57
RPN6	YDL097C	YHM2	Q04013	314 aa		5.25	□□□□□ -1.57
RPN6	YDL097C	MEC1	P38111	2368 aa		5.25	□□□□□ -1.57
RPN6	YDL097C	RAD24	P32641	659 aa		5.24	□□□□□ -1.57
RPN6	YDL097C	YER158C	P40095	573 aa		5.24	□□□□□ -1.57
RPN6	YDL097C	TAF1	P46677	1066 aa		5.24	□□□□□ -1.57
RPN6	YDL097C	MUK1	Q02866	612 aa		5.24	□□□□□ -1.57
RPN6	YDL097C	ACE2	P21192	770 aa		5.23	□□□□□ -1.57
RPN6	YDL097C	SLY41	P22215	453 aa		5.23	□□□□□ -1.57
RPN6	YDL097C	KTR1	P27810	393 aa	Known RBP	5.23	□□□□□ -1.57
RPN6	YDL097C	GCS1	P35197	352 aa		5.23	□□□□□ -1.57
RPN6	YDL097C	VID27	P40157	782 aa		5.23	□□□□□ -1.57
RPN6	YDL097C	ESL1	P40456	1118 aa		5.23	□□□□□ -1.57
RPN6	YDL097C	ATG32	P40458	529 aa		5.23	□□□□□ -1.57
RPN6	YDL097C	SAD1	P43589	448 aa		5.23	□□□□□ -1.57
RPN6	YDL097C	LSB3	P43603	459 aa	Known RBP	5.23	□□□□□ -1.57
RPN6	YDL097C	UBP15	P50101	1230 aa		5.23	□□□□□ -1.57
RPN6	YDL097C	PSP2	P50109	593 aa	Known RBP	5.23	□□□□□ -1.57
RPN6	YDL097C	LEE1	Q02799	301 aa	Known RBP	5.23	□□□□□ -1.57
RPN6	YDL097C	VIP1	Q06685	1146 aa	Known RBP	5.23	□□□□□ -1.57
RPN6	YDL097C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.23	□□□□□ -1.57	not detected
RPN6	YDL097C	HMG2	P12684	1045 aa		5.23	□□□□□ -1.57
RPN6	YDL097C	DID4	P36108	232 aa		5.23	□□□□□ -1.57
RPN6	YDL097C	MIC60	P36112	540 aa		5.23	□□□□□ -1.57
RPN6	YDL097C	FPR3	P38911	411 aa	Known RBP	5.23	□□□□□ -1.57
RPN6	YDL097C	YGR130C	P53278	816 aa		5.23	□□□□□ -1.57
RPN6	YDL097C	MRI1	Q06489	411 aa	Known RBP	5.23	□□□□□ -1.57
RPN6	YDL097C	UTP4	Q06679	776 aa	Known RBP	5.23	□□□□□ -1.57
RPN6	YDL097C	ALR1	Q08269	859 aa		5.23	□□□□□ -1.57
RPN6	YDL097C	LAA1	P39526	2014 aa		5.22	□□□□□ -1.57
RPN6	YDL097C	SPE1	P08432	466 aa		5.22	□□□□□ -1.57
RPN6	YDL097C	SFP1	P32432	683 aa		5.22	□□□□□ -1.57
RPN6	YDL097C	GEF1	P37020	779 aa		5.22	□□□□□ -1.57
RPN6	YDL097C	YHR202W	P38887	602 aa		5.22	□□□□□ -1.57
RPN6	YDL097C	BOI2	P39969	1040 aa		5.22	□□□□□ -1.57
RPN6	YDL097C	RPL34B	P40525	121 aa	Known RBP	5.22	□□□□□ -1.57
RPN6	YDL097C	RSM26	P47141	266 aa		5.22	□□□□□ -1.57
RPN6	YDL097C	TBF1	Q02457	562 aa		5.22	□□□□□ -1.57
RPN6	YDL097C	NSE5	Q03718	556 aa		5.22	□□□□□ -1.57
RPN6	YDL097C	PUS1	Q12211	544 aa	Known RBP	5.22	□□□□□ -1.57
RPN6	YDL097C	YDL206W	Q12424	762 aa		5.22	□□□□□ -1.57
RPN6	YDL097C	CET1	O13297	549 aa	Predicted RBP	5.21	□□□□□ -1.58
RPN6	YDL097C	MRT4	P33201	236 aa	Known RBP	5.21	□□□□□ -1.58
RPN6	YDL097C	BUD2	P33314	1104 aa		5.21	□□□□□ -1.58
RPN6	YDL097C	YBL036C	P38197	257 aa		5.21	□□□□□ -1.58
RPN6	YDL097C	RFC1	P38630	861 aa	Known RBP	5.21	□□□□□ -1.58
RPN6	YDL097C	VPS8	P39702	1274 aa		5.21	□□□□□ -1.58
RPN6	YDL097C	LSB6	P42951	607 aa		5.21	□□□□□ -1.58
RPN6	YDL097C	ALT2	P52892	507 aa		5.21	□□□□□ -1.58
RPN6	YDL097C	LIF1	P53150	421 aa		5.21	□□□□□ -1.58
RPN6	YDL097C	TMN2	Q04562	672 aa		5.21	□□□□□ -1.58
RPN6	YDL097C	PEX2	P32800	271 aa		5.2	□□□□□ -1.58
RPN6	YDL097C	VPS45	P38932	577 aa		5.2	□□□□□ -1.58
RPN6	YDL097C	SBE2	P42223	864 aa	Known RBP	5.2	□□□□□ -1.58
RPN6	YDL097C	LSC2	P53312	427 aa		5.2	□□□□□ -1.58
RPN6	YDL097C	CSL4	P53859	292 aa	Predicted RBP	5.2	□□□□□ -1.58
RPN6	YDL097C	PTA1	Q01329	785 aa	Predicted RBP	5.2	□□□□□ -1.58
RPN6	YDL097C	GPI13	Q07830	1017 aa		5.2	□□□□□ -1.58
RPN6	YDL097C	HSF1	P10961	833 aa		5.19	□□□□□ -1.58
RPN6	YDL097C	PRP9	P19736	530 aa	Known RBP	5.19	□□□□□ -1.58
RPN6	YDL097C	CCL1	P37366	393 aa		5.19	□□□□□ -1.58
RPN6	YDL097C	YHL026C	P38740	315 aa		5.19	□□□□□ -1.58
RPN6	YDL097C	PCF11	P39081	626 aa	Predicted RBP	5.19	□□□□□ -1.58
RPN6	YDL097C	GIP4	P39732	760 aa		5.19	□□□□□ -1.58
RPN6	YDL097C	RPA14	P50106	137 aa		5.19	□□□□□ -1.58
RPN6	YDL097C	YNL134C	P53912	376 aa	Known RBP	5.19	□□□□□ -1.58
RPN6	YDL097C	UBP2	Q01476	1272 aa		5.19	□□□□□ -1.58
RPN6	YDL097C	SSL1	Q04673	461 aa	Predicted RBP	5.19	□□□□□ -1.58
RPN6	YDL097C	SUE1	Q06524	206 aa		5.19	□□□□□ -1.58
RPN6	YDL097C	RAD61	Q99359	647 aa		5.19	□□□□□ -1.58
RPN6	YDL097C	UBC1	P21734	215 aa	Known RBP	5.18	□□□□□ -1.58
RPN6	YDL097C	PEX34	P25584	144 aa		5.18	□□□□□ -1.58
RPN6	YDL097C	PCM1	P38628	557 aa	Known RBP	5.18	□□□□□ -1.58
RPN6	YDL097C	MED6	P38782	295 aa		5.18	□□□□□ -1.58
RPN6	YDL097C	RTS1	P38903	757 aa		5.18	□□□□□ -1.58
RPN6	YDL097C	PES4	P39684	611 aa		5.18	□□□□□ -1.58
RPN6	YDL097C	HST2	P53686	357 aa		5.18	□□□□□ -1.58
RPN6	YDL097C	MRD1	Q06106	887 aa	Known RBP	5.18	□□□□□ -1.58
RPN6	YDL097C	YPR097W	Q06839	1073 aa		5.18	□□□□□ -1.58
RPN6	YDL097C	PDH1	Q12428	516 aa	Known RBP	5.18	□□□□□ -1.58
RPN6	YDL097C	OSH2	Q12451	1283 aa		5.18	□□□□□ -1.58
RPN6	YDL097C	RAD27	P26793	382 aa		5.17	□□□□□ -1.58
RPN6	YDL097C	YHL050C	P38721	697 aa		5.17	□□□□□ -1.58
RPN6	YDL097C	NDT80	P38830	627 aa		5.17	□□□□□ -1.58
RPN6	YDL097C	IRC8	P47046	822 aa		5.17	□□□□□ -1.58
RPN6	YDL097C	FMS1	P50264	508 aa		5.17	□□□□□ -1.58
RPN6	YDL097C	PKH3	Q03306	898 aa	Predicted RBP	5.17	□□□□□ -1.58
RPN6	YDL097C	MMP1	Q12372	583 aa		5.17	□□□□□ -1.58
RPN6	YDL097C	PCD1	Q12524	340 aa		5.17	□□□□□ -1.58
RPN6	YDL097C	RME1	P32338	300 aa	Known RBP	5.16	□□□□□ -1.58
RPN6	YDL097C	BIO2	P32451	375 aa		5.16	□□□□□ -1.58
RPN6	YDL097C	CSE2	P33308	149 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms