RNA–Protein interactions for RNA: YCL074W

YCL074W, Transcript of Pseudogene: encodes fragment of Ty Pol protein, yeast

Gene YCL074W, Length 927 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL074W	YCL074W	RAD1	P06777	1100 aa		11.15	□□□□□ -0.62
YCL074W	YCL074W	SWI6	P09959	803 aa		11.15	□□□□□ -0.62
YCL074W	YCL074W	PCK1	P10963	549 aa		11.15	□□□□□ -0.62
YCL074W	YCL074W	DAL7	P21826	554 aa		11.15	□□□□□ -0.62
YCL074W	YCL074W	ECM32	P32644	1121 aa	Known RBP	11.15	□□□□□ -0.62
YCL074W	YCL074W	HXT8	P40886	569 aa		11.15	□□□□□ -0.62
YCL074W	YCL074W	YGR021W	P53212	290 aa		11.15	□□□□□ -0.62
YCL074W	YCL074W	YGR130C	P53278	816 aa		11.15	□□□□□ -0.62
YCL074W	YCL074W	TRM44	Q02648	567 aa	Known RBP	11.15	□□□□□ -0.62
YCL074W	YCL074W	SIL1	Q08199	421 aa		11.15	□□□□□ -0.62
YCL074W	YCL074W	SRD1	P09007	221 aa		11.14	□□□□□ -0.63
YCL074W	YCL074W	CLB5	P30283	435 aa		11.14	□□□□□ -0.63
YCL074W	YCL074W	UGA4	P32837	571 aa		11.14	□□□□□ -0.63
YCL074W	YCL074W	SLD2	P34252	453 aa		11.14	□□□□□ -0.63
YCL074W	YCL074W	GDT1	P38301	280 aa	Predicted RBP	11.14	□□□□□ -0.63
YCL074W	YCL074W	TPS3	P38426	1054 aa	Known RBP	11.14	□□□□□ -0.63
YCL074W	YCL074W	KEL1	P38853	1164 aa	Known RBP	11.14	□□□□□ -0.63
YCL074W	YCL074W	BRE2	P43132	505 aa		11.14	□□□□□ -0.63
YCL074W	YCL074W	KAP114	P53067	1004 aa		11.14	□□□□□ -0.63
YCL074W	YCL074W	URH1	Q04179	340 aa		11.14	□□□□□ -0.63
YCL074W	YCL074W	APL5	Q08951	932 aa	Known RBP	11.14	□□□□□ -0.63
YCL074W	YCL074W	FAL1	Q12099	399 aa	Known RBP	11.14	□□□□□ -0.63
YCL074W	YCL074W	ZRT2	Q12436	422 aa		11.14	□□□□□ -0.63
YCL074W	YCL074W	GCG1	P32656	232 aa	Known RBP	11.13	□□□□□ -0.63
YCL074W	YCL074W	STV1	P37296	890 aa		11.13	□□□□□ -0.63
YCL074W	YCL074W	YLR297W	Q05899	129 aa		11.13	□□□□□ -0.63
YCL074W	YCL074W	STE23	Q06010	1027 aa		11.13	□□□□□ -0.63
YCL074W	YCL074W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	11.12	□□□□□ -0.63	not detected
YCL074W	YCL074W	CLN3	P13365	580 aa		11.12	□□□□□ -0.63
YCL074W	YCL074W	PTC4	P38089	393 aa		11.12	□□□□□ -0.63
YCL074W	YCL074W	FIG4	P42837	879 aa		11.12	□□□□□ -0.63
YCL074W	YCL074W	RPC17	P47076	161 aa		11.12	□□□□□ -0.63
YCL074W	YCL074W	LIF1	P53150	421 aa		11.12	□□□□□ -0.63
YCL074W	YCL074W	DIP5	P53388	608 aa		11.12	□□□□□ -0.63
YCL074W	YCL074W	CUR1	Q06469	252 aa		11.12	□□□□□ -0.63
YCL074W	YCL074W	RIO1	Q12196	484 aa	Known RBP	11.12	□□□□□ -0.63
YCL074W	YCL074W	ERG11	P10614	530 aa		11.11	□□□□□ -0.63
YCL074W	YCL074W	PHO8	P11491	566 aa		11.11	□□□□□ -0.63
YCL074W	YCL074W	SUP45	P12385	437 aa	Known RBP	11.11	□□□□□ -0.63
YCL074W	YCL074W	KRS1	P15180	591 aa	Known RBP	11.11	□□□□□ -0.63
YCL074W	YCL074W	PRP22	P24384	1145 aa	Known RBP	11.11	□□□□□ -0.63
YCL074W	YCL074W	UBC6	P33296	250 aa	Predicted RBP	11.11	□□□□□ -0.63
YCL074W	YCL074W	SPT21	P35209	758 aa		11.11	□□□□□ -0.63
YCL074W	YCL074W	LAS1	P36146	502 aa	Predicted RBP	11.11	□□□□□ -0.63
YCL074W	YCL074W	UBP13	P38187	747 aa		11.11	□□□□□ -0.63
YCL074W	YCL074W	SPP381	P38282	291 aa	Predicted RBP	11.11	□□□□□ -0.63
YCL074W	YCL074W	RPN3	P40016	523 aa	Known RBP	11.11	□□□□□ -0.63
YCL074W	YCL074W	ULP2	P40537	1034 aa	Predicted RBP	11.11	□□□□□ -0.63
YCL074W	YCL074W	GPD2	P41911	440 aa	Known RBP	11.11	□□□□□ -0.63
YCL074W	YCL074W	SYH1	Q02875	849 aa	Known RBP	11.11	□□□□□ -0.63
YCL074W	YCL074W	SFH1	Q06168	426 aa		11.11	□□□□□ -0.63
YCL074W	YCL074W	CSR1	Q06705	408 aa	Known RBP	11.11	□□□□□ -0.63
YCL074W	YCL074W	YOR223W	Q12015	292 aa		11.11	□□□□□ -0.63
YCL074W	YCL074W	TRP2	P00899	507 aa	Known RBP	11.1	□□□□□ -0.63
YCL074W	YCL074W	SUV3	P32580	737 aa		11.1	□□□□□ -0.63
YCL074W	YCL074W	PHO88	P38264	188 aa	Predicted RBP	11.1	□□□□□ -0.63
YCL074W	YCL074W	RCK2	P38623	610 aa		11.1	□□□□□ -0.63
YCL074W	YCL074W	NIT1	P40447	199 aa		11.1	□□□□□ -0.63
YCL074W	YCL074W	PXA1	P41909	870 aa		11.1	□□□□□ -0.63
YCL074W	YCL074W	YJR079W	P47126	109 aa		11.1	□□□□□ -0.63
YCL074W	YCL074W	ESBP6	P53918	673 aa		11.1	□□□□□ -0.63
YCL074W	YCL074W	ALD6	P54115	500 aa	Known RBP	11.1	□□□□□ -0.63
YCL074W	YCL074W	YMR018W	Q04364	514 aa		11.1	□□□□□ -0.63
YCL074W	YCL074W	UTP14	Q04500	899 aa	Known RBP	11.1	□□□□□ -0.63
YCL074W	YCL074W	PHM6	Q05637	104 aa		11.1	□□□□□ -0.63
YCL074W	YCL074W	ECI1	Q05871	280 aa		11.1	□□□□□ -0.63
YCL074W	YCL074W	ATG20	Q07528	640 aa		11.1	□□□□□ -0.63
YCL074W	YCL074W	RLP24	Q07915	199 aa	Known RBP	11.1	□□□□□ -0.63
YCL074W	YCL074W	PGK1	P00560	416 aa	Known RBP	11.09	□□□□□ -0.63
YCL074W	YCL074W	BLI1	P35727	113 aa		11.09	□□□□□ -0.63
YCL074W	YCL074W	MCD4	P36051	919 aa		11.09	□□□□□ -0.63
YCL074W	YCL074W	YKL023W	P36103	277 aa	Known RBP	11.09	□□□□□ -0.63
YCL074W	YCL074W	PGM2	P37012	569 aa	Known RBP	11.09	□□□□□ -0.63
YCL074W	YCL074W	ACA1	P39970	489 aa		11.09	□□□□□ -0.63
YCL074W	YCL074W	JJJ1	P53863	590 aa		11.09	□□□□□ -0.63
YCL074W	YCL074W	EEB1	Q02891	456 aa		11.09	□□□□□ -0.63
YCL074W	YCL074W	YMR102C	Q03177	834 aa		11.09	□□□□□ -0.63
YCL074W	YCL074W	SUB2	Q07478	446 aa	Known RBP	11.09	□□□□□ -0.63
YCL074W	YCL074W	WHI4	Q07655	649 aa	Known RBP	11.09	□□□□□ -0.63
YCL074W	YCL074W	CBP1	P07252	654 aa		11.08	□□□□□ -0.64
YCL074W	YCL074W	RAD18	P10862	487 aa		11.08	□□□□□ -0.64
YCL074W	YCL074W	CHS2	P14180	963 aa		11.08	□□□□□ -0.64
YCL074W	YCL074W	HPR1	P17629	752 aa	Known RBP	11.08	□□□□□ -0.64
YCL074W	YCL074W	ESS1	P22696	170 aa		11.08	□□□□□ -0.64
YCL074W	YCL074W	YEL1	P34225	687 aa		11.08	□□□□□ -0.64
YCL074W	YCL074W	VHR2	P40041	505 aa		11.08	□□□□□ -0.64
YCL074W	YCL074W	PSY2	P40164	858 aa		11.08	□□□□□ -0.64
YCL074W	YCL074W	NCS2	P53923	493 aa	Predicted RBP	11.08	□□□□□ -0.64
YCL074W	YCL074W	DIG1	Q03063	452 aa	Known RBP	11.08	□□□□□ -0.64
YCL074W	YCL074W	YOL087C	Q99247	1116 aa		11.08	□□□□□ -0.64
YCL074W	YCL074W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	11.07	□□□□□ -0.64	not detected
YCL074W	YCL074W	TCP1	P12612	559 aa	Known RBP	11.07	□□□□□ -0.64
YCL074W	YCL074W	GLC3	P32775	704 aa		11.07	□□□□□ -0.64
YCL074W	YCL074W	AVT3	P36062	692 aa		11.07	□□□□□ -0.64
YCL074W	YCL074W	FIS1	P40515	155 aa		11.07	□□□□□ -0.64
YCL074W	YCL074W	TIM8	P57744	87 aa		11.07	□□□□□ -0.64
YCL074W	YCL074W	SNF1	P06782	633 aa	Known RBP	11.06	□□□□□ -0.64
YCL074W	YCL074W	SEC8	P32855	1065 aa		11.06	□□□□□ -0.64
YCL074W	YCL074W	YKL050C	P35736	922 aa		11.06	□□□□□ -0.64
YCL074W	YCL074W	UBP11	P36026	717 aa		11.06	□□□□□ -0.64

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms