RNA–Protein interactions for RNA: YCL036W

GFD2, Transcript of Protein of unknown function, yeast

Gene GFD2, Length 1,701 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GFD2	YCL036W	NCS2	P53923	493 aa	Predicted RBP	13.22	□□□□□ -0.29
GFD2	YCL036W	TY1B-A	O13527	1196 aa	Known RBP	13.21	□□□□□ -0.3
GFD2	YCL036W	YKR018C	P36114	725 aa		13.21	□□□□□ -0.3
GFD2	YCL036W	RRT6	P53117	311 aa	Predicted RBP	13.21	□□□□□ -0.3
GFD2	YCL036W	VAC14	Q06708	880 aa		13.21	□□□□□ -0.3
GFD2	YCL036W	ISA1	Q07821	250 aa	Predicted RBP	13.21	□□□□□ -0.3
GFD2	YCL036W	PRP31	P49704	494 aa	Predicted RBP	13.2	□□□□□ -0.3
GFD2	YCL036W	ZPR1	P53303	486 aa	Known RBP	13.2	□□□□□ -0.3
GFD2	YCL036W	TCP1	P12612	559 aa	Known RBP	13.19	□□□□□ -0.3
GFD2	YCL036W	VMA2	P16140	517 aa	Known RBP	13.19	□□□□□ -0.3
GFD2	YCL036W	MCD4	P36051	919 aa		13.19	□□□□□ -0.3
GFD2	YCL036W	REI1	P38344	393 aa	Predicted RBP	13.19	□□□□□ -0.3
GFD2	YCL036W	SMC2	P38989	1170 aa	Known RBP	13.19	□□□□□ -0.3
GFD2	YCL036W	CUR1	Q06469	252 aa		13.19	□□□□□ -0.3
GFD2	YCL036W	YPR078C	Q06813	372 aa		13.19	□□□□□ -0.3
GFD2	YCL036W	YLR001C	Q07895	862 aa		13.19	□□□□□ -0.3
GFD2	YCL036W	PHO8	P11491	566 aa		13.19	□□□□□ -0.3
GFD2	YCL036W	NIP100	P33420	868 aa		13.19	□□□□□ -0.3
GFD2	YCL036W	KTR2	P33550	425 aa		13.19	□□□□□ -0.3
GFD2	YCL036W	TCD1	P38756	429 aa		13.19	□□□□□ -0.3
GFD2	YCL036W	YIL089W	P40500	205 aa		13.19	□□□□□ -0.3
GFD2	YCL036W	GIR2	Q03768	265 aa	Predicted RBP	13.19	□□□□□ -0.3
GFD2	YCL036W	NCR1	Q12200	1170 aa		13.19	□□□□□ -0.3
GFD2	YCL036W	DPB3	P27344	201 aa		13.18	□□□□□ -0.3
GFD2	YCL036W	SMC1	P32908	1225 aa		13.18	□□□□□ -0.3
GFD2	YCL036W	ERC1	P38767	581 aa		13.18	□□□□□ -0.3
GFD2	YCL036W	LCB2	P40970	561 aa		13.18	□□□□□ -0.3
GFD2	YCL036W	HUL5	P53119	910 aa		13.18	□□□□□ -0.3
GFD2	YCL036W	OPY2	Q06810	360 aa		13.18	□□□□□ -0.3
GFD2	YCL036W	ERP3	Q12403	225 aa		13.18	□□□□□ -0.3
GFD2	YCL036W	YSC83	P32792	385 aa		13.17	□□□□□ -0.3
GFD2	YCL036W	CAB3	P36076	571 aa		13.17	□□□□□ -0.3
GFD2	YCL036W	UBP13	P38187	747 aa		13.17	□□□□□ -0.3
GFD2	YCL036W	GPB2	P39717	880 aa		13.17	□□□□□ -0.3
GFD2	YCL036W	NET1	P47035	1189 aa		13.17	□□□□□ -0.3
GFD2	YCL036W	SOV1	Q04748	898 aa		13.17	□□□□□ -0.3
GFD2	YCL036W	DBP5	P20449	482 aa	Known RBP	13.16	□□□□□ -0.3
GFD2	YCL036W	TKL1	P23254	680 aa	Known RBP	13.16	□□□□□ -0.3
GFD2	YCL036W	YKL023W	P36103	277 aa	Known RBP	13.16	□□□□□ -0.3
GFD2	YCL036W	REG2	P38232	338 aa		13.16	□□□□□ -0.3
GFD2	YCL036W	MMM1	P41800	426 aa		13.16	□□□□□ -0.3
GFD2	YCL036W	RRB1	Q04225	511 aa	Known RBP	13.16	□□□□□ -0.3
GFD2	YCL036W	SVF1	Q05515	481 aa		13.16	□□□□□ -0.3
GFD2	YCL036W	MLH2	Q07980	695 aa		13.16	□□□□□ -0.3
GFD2	YCL036W	CDC48	P25694	835 aa	Known RBP	13.16	□□□□□ -0.3
GFD2	YCL036W	UBP15	P50101	1230 aa		13.16	□□□□□ -0.3
GFD2	YCL036W	YGR125W	P53273	1036 aa		13.16	□□□□□ -0.3
GFD2	YCL036W	NGL3	Q03210	505 aa		13.16	□□□□□ -0.3
GFD2	YCL036W	RBA50	Q04418	439 aa		13.16	□□□□□ -0.3
GFD2	YCL036W	YLR297W	Q05899	129 aa		13.16	□□□□□ -0.3
GFD2	YCL036W	CFT2	Q12102	859 aa	Predicted RBP	13.16	□□□□□ -0.3
GFD2	YCL036W	NOP14	Q99207	810 aa	Known RBP	13.16	□□□□□ -0.3
GFD2	YCL036W	HXT1	P32465	570 aa		13.15	□□□□□ -0.3
GFD2	YCL036W	SRB4	P32569	687 aa		13.15	□□□□□ -0.3
GFD2	YCL036W	LTV1	P34078	463 aa		13.15	□□□□□ -0.3
GFD2	YCL036W	JNM1	P36224	373 aa		13.15	□□□□□ -0.3
GFD2	YCL036W	SET5	P38890	526 aa	Known RBP	13.15	□□□□□ -0.3
GFD2	YCL036W	BUD16	P39988	312 aa		13.15	□□□□□ -0.3
GFD2	YCL036W	SDS3	P40505	327 aa		13.15	□□□□□ -0.3
GFD2	YCL036W	FIG4	P42837	879 aa		13.15	□□□□□ -0.3
GFD2	YCL036W	SMC3	P47037	1230 aa		13.15	□□□□□ -0.3
GFD2	YCL036W	YMR124W	P39523	943 aa	Known RBP	13.14	□□□□□ -0.31
GFD2	YCL036W	MAL13	P53338	473 aa		13.14	□□□□□ -0.31
GFD2	YCL036W	SLD5	Q03406	294 aa		13.14	□□□□□ -0.31
GFD2	YCL036W	CDC19	P00549	500 aa	Known RBP	13.13	□□□□□ -0.31
GFD2	YCL036W	CHS2	P14180	963 aa		13.13	□□□□□ -0.31
GFD2	YCL036W	CKI1	P20485	582 aa		13.13	□□□□□ -0.31
GFD2	YCL036W	EUG1	P32474	517 aa		13.13	□□□□□ -0.31
GFD2	YCL036W	YEL043W	P32618	956 aa		13.13	□□□□□ -0.31
GFD2	YCL036W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	13.13	□□□□□ -0.31	RIP-Chip
GFD2	YCL036W	VPS29	P38759	282 aa		13.13	□□□□□ -0.31
GFD2	YCL036W	SMF1	P38925	575 aa		13.13	□□□□□ -0.31
GFD2	YCL036W	AVT1	P47082	602 aa		13.13	□□□□□ -0.31
GFD2	YCL036W	TAM41	P53230	385 aa		13.13	□□□□□ -0.31
GFD2	YCL036W	TIM8	P57744	87 aa		13.13	□□□□□ -0.31
GFD2	YCL036W	CSR1	Q06705	408 aa	Known RBP	13.13	□□□□□ -0.31
GFD2	YCL036W	DAS2	Q12084	232 aa		13.13	□□□□□ -0.31
GFD2	YCL036W	SWI6	P09959	803 aa		13.13	□□□□□ -0.31
GFD2	YCL036W	IXR1	P33417	597 aa		13.13	□□□□□ -0.31
GFD2	YCL036W	ATG19	P35193	415 aa		13.13	□□□□□ -0.31
GFD2	YCL036W	KIC1	P38692	1080 aa		13.13	□□□□□ -0.31
GFD2	YCL036W	COS5	P47187	383 aa		13.13	□□□□□ -0.31
GFD2	YCL036W	RLP24	Q07915	199 aa	Known RBP	13.13	□□□□□ -0.31
GFD2	YCL036W	SIL1	Q08199	421 aa		13.13	□□□□□ -0.31
GFD2	YCL036W	TYW1	Q08960	810 aa	Known RBP	13.13	□□□□□ -0.31
GFD2	YCL036W	PKC1	P24583	1151 aa		13.12	□□□□□ -0.31
GFD2	YCL036W	VPS53	P47061	822 aa		13.12	□□□□□ -0.31
GFD2	YCL036W	NOC3	Q07896	663 aa	Predicted RBP	13.12	□□□□□ -0.31
GFD2	YCL036W	PAP1	P29468	568 aa	Known RBP	13.11	□□□□□ -0.31
GFD2	YCL036W	YAF9	P53930	226 aa		13.11	□□□□□ -0.31
GFD2	YCL036W	ROD1	Q02805	837 aa		13.11	□□□□□ -0.31
GFD2	YCL036W	DUS4	Q06063	367 aa		13.11	□□□□□ -0.31
GFD2	YCL036W	NAM7	P30771	971 aa	Known RBP	13.1	□□□□□ -0.31
GFD2	YCL036W	DBP7	P36120	742 aa	Known RBP	13.1	□□□□□ -0.31
GFD2	YCL036W	TVP38	P36164	337 aa		13.1	□□□□□ -0.31
GFD2	YCL036W	HMF1	P40037	129 aa	Known RBP	13.1	□□□□□ -0.31
GFD2	YCL036W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	13.1	□□□□□ -0.31	not detected
GFD2	YCL036W	DON1	Q05610	365 aa		13.1	□□□□□ -0.31
GFD2	YCL036W	TRP2	P00899	507 aa	Known RBP	13.1	□□□□□ -0.31
GFD2	YCL036W	DED1	P06634	604 aa	Known RBP	13.1	□□□□□ -0.31

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms