RNA–Protein interactions for RNA: YCL028W

RNQ1, Transcript of [PIN(+)] prion, yeastyeast

Gene RNQ1, Length 1,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RNQ1YCL028W NOC3Q07896 663 aaPredicted RBP12.27□□□□□ -0.45
RNQ1YCL028W TCO89Q08921 799 aa12.27□□□□□ -0.45
RNQ1YCL028W DED1P06634 604 aaKnown RBP12.26□□□□□ -0.45
RNQ1YCL028W POX1P13711 748 aa12.26□□□□□ -0.45
RNQ1YCL028W TIM23P32897 222 aa12.26□□□□□ -0.45
RNQ1YCL028W EBP2P36049 427 aaKnown RBP12.26□□□□□ -0.45
RNQ1YCL028W PSF2P40359 213 aa12.26□□□□□ -0.45
RNQ1YCL028W YAP7Q08182 245 aa12.26□□□□□ -0.45
RNQ1YCL028W ICL2Q12031 575 aa12.26□□□□□ -0.45
RNQ1YCL028W MED1Q12321 566 aa12.26□□□□□ -0.45
RNQ1YCL028W PDC1P06169 563 aaKnown RBP12.25□□□□□ -0.45
RNQ1YCL028W MAK16P10962 306 aaPredicted RBP12.25□□□□□ -0.45
RNQ1YCL028W MAS2P11914 482 aa12.25□□□□□ -0.45
RNQ1YCL028W RPC53P25441 422 aa12.25□□□□□ -0.45
RNQ1YCL028W ERC1P38767 581 aa12.25□□□□□ -0.45
RNQ1YCL028W CTM1P38818 585 aa12.25□□□□□ -0.45
RNQ1YCL028W FYV8P46949 817 aaKnown RBP12.25□□□□□ -0.45
RNQ1YCL028W CCM1P48237 864 aaPredicted RBP12.25□□□□□ -0.45
RNQ1YCL028W PSP2P50109 593 aaKnown RBP12.25□□□□□ -0.45
RNQ1YCL028W VID30P53076 958 aa12.25□□□□□ -0.45
RNQ1YCL028W TRK2P28584 889 aa12.24□□□□□ -0.45
RNQ1YCL028W IRE1P32361 1115 aa12.24□□□□□ -0.45
RNQ1YCL028W RPC25P35718 212 aa12.24□□□□□ -0.45
RNQ1YCL028W FLR1P38124 548 aa12.24□□□□□ -0.45
RNQ1YCL028W EAF5P39995 279 aa12.24□□□□□ -0.45
RNQ1YCL028W BRE5P53741 515 aaKnown RBP12.24□□□□□ -0.45
RNQ1YCL028W ROD1Q02805 837 aa12.24□□□□□ -0.45
RNQ1YCL028W CUR1Q06469 252 aa12.24□□□□□ -0.45
RNQ1YCL028W PHO8P11491 566 aa12.23□□□□□ -0.45
RNQ1YCL028W DBP1P24784 617 aaKnown RBP12.23□□□□□ -0.45
RNQ1YCL028W SEC65P29478 273 aa12.23□□□□□ -0.45
RNQ1YCL028W YSC83P32792 385 aa12.23□□□□□ -0.45
RNQ1YCL028W VPS35P34110 944 aa12.23□□□□□ -0.45
RNQ1YCL028W YEL1P34225 687 aa12.23□□□□□ -0.45
RNQ1YCL028W GPT2P36148 743 aa12.23□□□□□ -0.45
RNQ1YCL028W MIP6P38760 659 aaKnown RBP12.23□□□□□ -0.45
RNQ1YCL028W AVT1P47082 602 aa12.23□□□□□ -0.45
RNQ1YCL028W VPS75P53853 264 aa12.23□□□□□ -0.45
RNQ1YCL028W COG4Q06096 861 aa12.23□□□□□ -0.45
RNQ1YCL028W SPO75Q07798 868 aa12.23□□□□□ -0.45
RNQ1YCL028W SCP160P06105 1222 aaKnown RBP RIP-Chip data12.22□□□□□ -0.45 RIP-Chip
RNQ1YCL028W RME1P32338 300 aaKnown RBP12.22□□□□□ -0.45
RNQ1YCL028W COT1P32798 439 aa12.22□□□□□ -0.45
RNQ1YCL028W YJR107WP47145 328 aa12.22□□□□□ -0.45
RNQ1YCL028W COQ9Q05779 260 aa12.22□□□□□ -0.45
RNQ1YCL028W RPS6AP0CX37 236 aaKnown RBP12.21□□□□□ -0.45
RNQ1YCL028W RPS6BP0CX38 236 aaPredicted RBP12.21□□□□□ -0.45
RNQ1YCL028W KIN82P25341 720 aa12.21□□□□□ -0.45
RNQ1YCL028W LEO1P38439 464 aa12.21□□□□□ -0.45
RNQ1YCL028W KSP1P38691 1029 aaKnown RBP12.21□□□□□ -0.45
RNQ1YCL028W SKP2P42843 763 aa12.21□□□□□ -0.45
RNQ1YCL028W CAF130P53280 1122 aaPredicted RBP12.21□□□□□ -0.45
RNQ1YCL028W RTT102P53330 157 aa12.21□□□□□ -0.45
RNQ1YCL028W CYC8P14922 966 aa12.2□□□□□ -0.46
RNQ1YCL028W PHO13P19881 312 aa12.2□□□□□ -0.46
RNQ1YCL028W UBC1P21734 215 aaKnown RBP12.2□□□□□ -0.46
RNQ1YCL028W SSD1P24276 1250 aaKnown RBP RIP-Chip data12.2□□□□□ -0.46not detected
RNQ1YCL028W NAM7P30771 971 aaKnown RBP12.2□□□□□ -0.46
RNQ1YCL028W EFT1P32324 842 aaKnown RBP12.2□□□□□ -0.46
RNQ1YCL028W BCS1P32839 456 aa12.2□□□□□ -0.46
RNQ1YCL028W SHM1P37292 490 aaPredicted RBP12.2□□□□□ -0.46
RNQ1YCL028W UBP5P39944 805 aa12.2□□□□□ -0.46
RNQ1YCL028W ACF4P47129 309 aa12.2□□□□□ -0.46
RNQ1YCL028W GIR2Q03768 265 aaPredicted RBP12.2□□□□□ -0.46
RNQ1YCL028W OSW2Q12202 724 aa12.2□□□□□ -0.46
RNQ1YCL028W SUT2Q12286 268 aa12.2□□□□□ -0.46
RNQ1YCL028W YOR131CQ12486 218 aa12.2□□□□□ -0.46
RNQ1YCL028W RTT107P38850 1070 aa12.19□□□□□ -0.46
RNQ1YCL028W TAM41P53230 385 aa12.19□□□□□ -0.46
RNQ1YCL028W MSC2Q03455 724 aa12.19□□□□□ -0.46
RNQ1YCL028W SPO11P23179 398 aa12.18□□□□□ -0.46
RNQ1YCL028W APL1P27351 700 aa12.18□□□□□ -0.46
RNQ1YCL028W SMY2P32909 740 aaKnown RBP12.18□□□□□ -0.46
RNQ1YCL028W MNN4P36044 1178 aa12.18□□□□□ -0.46
RNQ1YCL028W DAK1P54838 584 aaKnown RBP12.18□□□□□ -0.46
RNQ1YCL028W ULP1Q02724 621 aa12.18□□□□□ -0.46
RNQ1YCL028W MLH2Q07980 695 aa12.18□□□□□ -0.46
RNQ1YCL028W IES4Q08561 116 aa12.18□□□□□ -0.46
RNQ1YCL028W CWC2Q12046 339 aaPredicted RBP12.18□□□□□ -0.46
RNQ1YCL028W ATG11Q12527 1178 aa12.18□□□□□ -0.46
RNQ1YCL028W SWI6P09959 803 aa12.17□□□□□ -0.46
RNQ1YCL028W SSB1P11484 613 aaKnown RBP12.17□□□□□ -0.46
RNQ1YCL028W SNA3P14359 133 aa12.17□□□□□ -0.46
RNQ1YCL028W GUA1P38625 525 aaKnown RBP12.17□□□□□ -0.46
RNQ1YCL028W SSB2P40150 613 aaKnown RBP12.17□□□□□ -0.46
RNQ1YCL028W HIF1Q12373 385 aa12.17□□□□□ -0.46
RNQ1YCL028W CHS2P14180 963 aa12.16□□□□□ -0.46
RNQ1YCL028W EFM2P38347 419 aa12.16□□□□□ -0.46
RNQ1YCL028W LCB2P40970 561 aa12.16□□□□□ -0.46
RNQ1YCL028W STR2P47164 639 aa12.16□□□□□ -0.46
RNQ1YCL028W YNL146WP53906 100 aa12.16□□□□□ -0.46
RNQ1YCL028W TIM8P57744 87 aa12.16□□□□□ -0.46
RNQ1YCL028W VTC3Q02725 835 aa12.16□□□□□ -0.46
RNQ1YCL028W YDR090CQ03193 310 aa12.16□□□□□ -0.46
RNQ1YCL028W YLR287CQ05881 355 aa12.16□□□□□ -0.46
RNQ1YCL028W RLP24Q07915 199 aaKnown RBP12.16□□□□□ -0.46
RNQ1YCL028W FAL1Q12099 399 aaKnown RBP12.16□□□□□ -0.46
RNQ1YCL028W RTP1Q12751 981 aa12.16□□□□□ -0.46
RNQ1YCL028W AFT1P22149 690 aa12.15□□□□□ -0.46
RNQ1YCL028W PAH1P32567 862 aa12.15□□□□□ -0.46
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms