RNA–Protein interactions for RNA: YCL025C

AGP1, Transcript of Low-affinity amino acid permease with broad substrate range, yeast

Gene AGP1, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AGP1	YCL025C	YKL023W	P36103	277 aa	Known RBP	11.4	□□□□□ -0.58
AGP1	YCL025C	UTP13	Q05946	817 aa	Known RBP	11.4	□□□□□ -0.58
AGP1	YCL025C	CKI1	P20485	582 aa		11.39	□□□□□ -0.59
AGP1	YCL025C	NIP100	P33420	868 aa		11.39	□□□□□ -0.59
AGP1	YCL025C	SMC2	P38989	1170 aa	Known RBP	11.39	□□□□□ -0.59
AGP1	YCL025C	KTR2	P33550	425 aa		11.39	□□□□□ -0.59
AGP1	YCL025C	RRP1	P35178	278 aa	Predicted RBP	11.39	□□□□□ -0.59
AGP1	YCL025C	JNM1	P36224	373 aa		11.39	□□□□□ -0.59
AGP1	YCL025C	YJL007C	P47080	104 aa		11.39	□□□□□ -0.59
AGP1	YCL025C	DUS3	Q06053	668 aa	Known RBP	11.39	□□□□□ -0.59
AGP1	YCL025C	YPR078C	Q06813	372 aa		11.39	□□□□□ -0.59
AGP1	YCL025C	MLH2	Q07980	695 aa		11.39	□□□□□ -0.59
AGP1	YCL025C	RMP1	Q12530	201 aa		11.39	□□□□□ -0.59
AGP1	YCL025C	MRF1	P30775	413 aa	Predicted RBP	11.38	□□□□□ -0.59
AGP1	YCL025C	LCB2	P40970	561 aa		11.38	□□□□□ -0.59
AGP1	YCL025C	DIG1	Q03063	452 aa	Known RBP	11.38	□□□□□ -0.59
AGP1	YCL025C	OPY2	Q06810	360 aa		11.38	□□□□□ -0.59
AGP1	YCL025C	SUB2	Q07478	446 aa	Known RBP	11.38	□□□□□ -0.59
AGP1	YCL025C	NCR1	Q12200	1170 aa		11.38	□□□□□ -0.59
AGP1	YCL025C	OSH2	Q12451	1283 aa		11.38	□□□□□ -0.59
AGP1	YCL025C	ERG11	P10614	530 aa		11.37	□□□□□ -0.59
AGP1	YCL025C	ERC1	P38767	581 aa		11.37	□□□□□ -0.59
AGP1	YCL025C	SAP1	P39955	897 aa	Known RBP	11.37	□□□□□ -0.59
AGP1	YCL025C	MVP1	P40959	511 aa	Known RBP	11.37	□□□□□ -0.59
AGP1	YCL025C	SPH1	Q06160	661 aa		11.37	□□□□□ -0.59
AGP1	YCL025C	UBX5	Q06682	500 aa		11.37	□□□□□ -0.59
AGP1	YCL025C	DAS2	Q12084	232 aa		11.37	□□□□□ -0.59
AGP1	YCL025C	GFA1	P14742	717 aa	Known RBP	11.37	□□□□□ -0.59
AGP1	YCL025C	RTG2	P32608	588 aa	Known RBP	11.37	□□□□□ -0.59
AGP1	YCL025C	RPN3	P40016	523 aa	Known RBP	11.37	□□□□□ -0.59
AGP1	YCL025C	GYL1	Q04322	720 aa		11.37	□□□□□ -0.59
AGP1	YCL025C	PGK1	P00560	416 aa	Known RBP	11.36	□□□□□ -0.59
AGP1	YCL025C	PCK1	P10963	549 aa		11.36	□□□□□ -0.59
AGP1	YCL025C	GAL2	P13181	574 aa		11.36	□□□□□ -0.59
AGP1	YCL025C	YDJ1	P25491	409 aa	Known RBP	11.36	□□□□□ -0.59
AGP1	YCL025C	MCD4	P36051	919 aa		11.36	□□□□□ -0.59
AGP1	YCL025C	FIS1	P40515	155 aa		11.36	□□□□□ -0.59
AGP1	YCL025C	CNM67	P53865	581 aa	Known RBP	11.36	□□□□□ -0.59
AGP1	YCL025C	GIR2	Q03768	265 aa	Predicted RBP	11.36	□□□□□ -0.59
AGP1	YCL025C	YMR114C	Q04471	368 aa	Known RBP	11.36	□□□□□ -0.59
AGP1	YCL025C	UTP14	Q04500	899 aa	Known RBP	11.36	□□□□□ -0.59
AGP1	YCL025C	POB3	Q04636	552 aa	Known RBP	11.36	□□□□□ -0.59
AGP1	YCL025C	CRD1	Q07560	283 aa		11.36	□□□□□ -0.59
AGP1	YCL025C	GIN4	Q12263	1142 aa		11.36	□□□□□ -0.59
AGP1	YCL025C	MIC19	P43594	170 aa		11.35	□□□□□ -0.59
AGP1	YCL025C	VID30	P53076	958 aa		11.35	□□□□□ -0.59
AGP1	YCL025C	PTA1	Q01329	785 aa	Predicted RBP	11.35	□□□□□ -0.59
AGP1	YCL025C	PHM6	Q05637	104 aa		11.35	□□□□□ -0.59
AGP1	YCL025C	TRP2	P00899	507 aa	Known RBP	11.35	□□□□□ -0.59
AGP1	YCL025C	BYE1	P36106	594 aa		11.35	□□□□□ -0.59
AGP1	YCL025C	PNT1	P38969	423 aa		11.35	□□□□□ -0.59
AGP1	YCL025C	BTN2	P53286	410 aa		11.35	□□□□□ -0.59
AGP1	YCL025C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	11.35	□□□□□ -0.59	not detected
AGP1	YCL025C	YLR297W	Q05899	129 aa		11.35	□□□□□ -0.59
AGP1	YCL025C	GUD1	Q07729	489 aa		11.35	□□□□□ -0.59
AGP1	YCL025C	PTC4	P38089	393 aa		11.34	□□□□□ -0.59
AGP1	YCL025C	SDS3	P40505	327 aa		11.34	□□□□□ -0.59
AGP1	YCL025C	NCS2	P53923	493 aa	Predicted RBP	11.34	□□□□□ -0.59
AGP1	YCL025C	CSR1	Q06705	408 aa	Known RBP	11.34	□□□□□ -0.59
AGP1	YCL025C	UTR4	P32626	227 aa		11.33	□□□□□ -0.6
AGP1	YCL025C	ECM32	P32644	1121 aa	Known RBP	11.33	□□□□□ -0.6
AGP1	YCL025C	MCR1	P36060	302 aa	Known RBP	11.33	□□□□□ -0.6
AGP1	YCL025C	FIG4	P42837	879 aa		11.33	□□□□□ -0.6
AGP1	YCL025C	CWC22	P53333	577 aa	Known RBP	11.33	□□□□□ -0.6
AGP1	YCL025C	URH1	Q04179	340 aa		11.33	□□□□□ -0.6
AGP1	YCL025C	PHO8	P11491	566 aa		11.32	□□□□□ -0.6
AGP1	YCL025C	CHS2	P14180	963 aa		11.32	□□□□□ -0.6
AGP1	YCL025C	MSH1	P25846	959 aa		11.32	□□□□□ -0.6
AGP1	YCL025C	CLB5	P30283	435 aa		11.32	□□□□□ -0.6
AGP1	YCL025C	YSC83	P32792	385 aa		11.32	□□□□□ -0.6
AGP1	YCL025C	CDC11	P32458	415 aa		11.31	□□□□□ -0.6
AGP1	YCL025C	UBP13	P38187	747 aa		11.31	□□□□□ -0.6
AGP1	YCL025C	SMC3	P47037	1230 aa		11.31	□□□□□ -0.6
AGP1	YCL025C	AVT1	P47082	602 aa		11.31	□□□□□ -0.6
AGP1	YCL025C	TIM8	P57744	87 aa		11.31	□□□□□ -0.6
AGP1	YCL025C	SFH1	Q06168	426 aa		11.31	□□□□□ -0.6
AGP1	YCL025C	NOP6	Q07623	225 aa	Known RBP	11.31	□□□□□ -0.6
AGP1	YCL025C	SLX4	Q12098	748 aa		11.31	□□□□□ -0.6
AGP1	YCL025C	CNS1	P33313	385 aa		11.31	□□□□□ -0.6
AGP1	YCL025C	CTK3	P46963	296 aa	Predicted RBP	11.31	□□□□□ -0.6
AGP1	YCL025C	TAM41	P53230	385 aa		11.31	□□□□□ -0.6
AGP1	YCL025C	CUR1	Q06469	252 aa		11.31	□□□□□ -0.6
AGP1	YCL025C	NUR1	Q12066	484 aa		11.31	□□□□□ -0.6
AGP1	YCL025C	TCP1	P12612	559 aa	Known RBP	11.3	□□□□□ -0.6
AGP1	YCL025C	DBP5	P20449	482 aa	Known RBP	11.3	□□□□□ -0.6
AGP1	YCL025C	OCT1	P35999	772 aa		11.3	□□□□□ -0.6
AGP1	YCL025C	RAD26	P40352	1085 aa		11.3	□□□□□ -0.6
AGP1	YCL025C	KAP114	P53067	1004 aa		11.3	□□□□□ -0.6
AGP1	YCL025C	YDR278C	Q05612	105 aa		11.3	□□□□□ -0.6
AGP1	YCL025C	CDC48	P25694	835 aa	Known RBP	11.29	□□□□□ -0.6
AGP1	YCL025C	MUD2	P36084	527 aa	Known RBP	11.29	□□□□□ -0.6
AGP1	YCL025C	TRZ1	P36159	838 aa	Predicted RBP	11.29	□□□□□ -0.6
AGP1	YCL025C	YGR021W	P53212	290 aa		11.29	□□□□□ -0.6
AGP1	YCL025C	VTI1	Q04338	217 aa		11.29	□□□□□ -0.6
AGP1	YCL025C	YML082W	Q04533	649 aa	Known RBP	11.29	□□□□□ -0.6
AGP1	YCL025C	DUS4	Q06063	367 aa		11.29	□□□□□ -0.6
AGP1	YCL025C	SWI6	P09959	803 aa		11.29	□□□□□ -0.6
AGP1	YCL025C	PER1	P25625	357 aa		11.29	□□□□□ -0.6
AGP1	YCL025C	NAM7	P30771	971 aa	Known RBP	11.29	□□□□□ -0.6
AGP1	YCL025C	RAD54	P32863	898 aa		11.29	□□□□□ -0.6

Retrieved 100 of 5,963 RNA–protein pairs in 67.6 ms