RNA–Protein interactions for RNA: YAL048C

GEM1, Transcript of Outer mitochondrial membrane GTPase, subunit of the ERMES complex, yeast

Gene GEM1, Length 1,989 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEM1	YAL048C	YOR093C	Q12275	1648 aa		4.78	□□□□□ -1.64
GEM1	YAL048C	KAR1	P11927	433 aa		4.78	□□□□□ -1.64
GEM1	YAL048C	SNF5	P18480	905 aa		4.78	□□□□□ -1.64
GEM1	YAL048C	SLA2	P33338	968 aa		4.78	□□□□□ -1.64
GEM1	YAL048C	WHI3	P34761	661 aa	Known RBP	4.78	□□□□□ -1.64
GEM1	YAL048C	YBR284W	P38150	797 aa		4.78	□□□□□ -1.64
GEM1	YAL048C	MNN1	P39106	762 aa		4.78	□□□□□ -1.64
GEM1	YAL048C	RCL1	Q08096	367 aa	Predicted RBP	4.78	□□□□□ -1.64
GEM1	YAL048C	HOS3	Q02959	697 aa	Known RBP	4.77	□□□□□ -1.65
GEM1	YAL048C	CEF1	Q03654	590 aa	Predicted RBP	4.77	□□□□□ -1.65
GEM1	YAL048C	ACM1	Q08981	209 aa		4.77	□□□□□ -1.65
GEM1	YAL048C	NKP1	Q12493	238 aa		4.77	□□□□□ -1.65
GEM1	YAL048C	AAR2	P32357	355 aa	Predicted RBP	4.76	□□□□□ -1.65
GEM1	YAL048C	MFT1	P33441	392 aa	Known RBP	4.76	□□□□□ -1.65
GEM1	YAL048C	TNA1	P53322	534 aa		4.76	□□□□□ -1.65
GEM1	YAL048C	YMR187C	Q03236	431 aa		4.76	□□□□□ -1.65
GEM1	YAL048C	HRQ1	Q05549	1077 aa		4.76	□□□□□ -1.65
GEM1	YAL048C	CDC12	P32468	407 aa	Known RBP	4.76	□□□□□ -1.65
GEM1	YAL048C	YKL151C	P36059	337 aa		4.76	□□□□□ -1.65
GEM1	YAL048C	UGA2	P38067	497 aa		4.76	□□□□□ -1.65
GEM1	YAL048C	ERT1	P38140	529 aa		4.76	□□□□□ -1.65
GEM1	YAL048C	MAL11	P53048	616 aa		4.76	□□□□□ -1.65
GEM1	YAL048C	SVL3	Q03088	825 aa	Known RBP	4.76	□□□□□ -1.65
GEM1	YAL048C	COG4	Q06096	861 aa		4.76	□□□□□ -1.65
GEM1	YAL048C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
GEM1	YAL048C	YVC1	Q12324	675 aa		4.76	□□□□□ -1.65
GEM1	YAL048C	SAM35	P14693	329 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	MSD1	P15179	658 aa	Known RBP	4.75	□□□□□ -1.65
GEM1	YAL048C	PPH3	P32345	308 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	CDC11	P32458	415 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	SEC6	P32844	805 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	AFR1	P33304	620 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	BAP2	P38084	609 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	SIT1	P39980	628 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	MMM1	P41800	426 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	YJR142W	P47173	342 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	YPR071W	Q12346	211 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	YGR161W-C	Q3E744	92 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	YPR053C	Q6Q5F3	151 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	TY1B-H	O13535	1793 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	TY1B-DR5	P0C2I2	1755 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	TY1B-DR6	P0C2I3	1755 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	TY1B-LR2	P0C2I5	1755 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.75	□□□□□ -1.65
GEM1	YAL048C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.75	□□□□□ -1.65
GEM1	YAL048C	TY1B-PR2	P0C2J0	1756 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.75	□□□□□ -1.65
GEM1	YAL048C	TY1B-JR1	P47098	1755 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	TY1B-ML2	Q03434	1755 aa	Known RBP	4.75	□□□□□ -1.65
GEM1	YAL048C	TY1B-ER1	Q03612	1755 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	TY1B-ML1	Q04711	1755 aa	Known RBP	4.75	□□□□□ -1.65
GEM1	YAL048C	TY1B-GR2	Q12269	1755 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	TY1B-OL	Q12273	1755 aa		4.75	□□□□□ -1.65
GEM1	YAL048C	TY1B-PL	Q12414	1755 aa	Known RBP	4.75	□□□□□ -1.65
GEM1	YAL048C	TOM70	P07213	617 aa	Known RBP	4.74	□□□□□ -1.65
GEM1	YAL048C	PWP2	P25635	923 aa	Known RBP	4.74	□□□□□ -1.65
GEM1	YAL048C	MSH2	P25847	964 aa		4.74	□□□□□ -1.65
GEM1	YAL048C	PRO1	P32264	428 aa		4.74	□□□□□ -1.65
GEM1	YAL048C	EBP2	P36049	427 aa	Known RBP	4.74	□□□□□ -1.65
GEM1	YAL048C	VPS24	P36095	224 aa	Known RBP	4.74	□□□□□ -1.65
GEM1	YAL048C	TAT1	P38085	619 aa		4.74	□□□□□ -1.65
GEM1	YAL048C	FUI1	P38196	639 aa		4.74	□□□□□ -1.65
GEM1	YAL048C	UBP12	P39538	1254 aa		4.74	□□□□□ -1.65
GEM1	YAL048C	GEM1	P39722	662 aa		4.74	□□□□□ -1.65
GEM1	YAL048C	MCA1	Q08601	432 aa		4.74	□□□□□ -1.65
GEM1	YAL048C	COQ4	O13525	335 aa		4.74	□□□□□ -1.65
GEM1	YAL048C	PGM1	P33401	570 aa	Known RBP	4.74	□□□□□ -1.65
GEM1	YAL048C	PET10	P36139	283 aa		4.74	□□□□□ -1.65
GEM1	YAL048C	YHL012W	P38709	493 aa		4.74	□□□□□ -1.65
GEM1	YAL048C	UBP6	P43593	499 aa	Known RBP	4.74	□□□□□ -1.65
GEM1	YAL048C	HSV2	P50079	448 aa	Predicted RBP	4.74	□□□□□ -1.65
GEM1	YAL048C	ESF2	P53743	316 aa	Known RBP	4.74	□□□□□ -1.65
GEM1	YAL048C	BUL2	Q03758	920 aa	Known RBP	4.74	□□□□□ -1.65
GEM1	YAL048C	NTG2	Q08214	380 aa		4.74	□□□□□ -1.65
GEM1	YAL048C	NUP170	P38181	1502 aa		4.73	□□□□□ -1.65
GEM1	YAL048C	BI4	P03879	638 aa		4.73	□□□□□ -1.65
GEM1	YAL048C	NPP1	P25353	742 aa		4.73	□□□□□ -1.65
GEM1	YAL048C	GRX7	P38068	203 aa		4.73	□□□□□ -1.65
GEM1	YAL048C	SAF1	P38352	637 aa		4.73	□□□□□ -1.65
GEM1	YAL048C	GDH3	P39708	457 aa		4.73	□□□□□ -1.65
GEM1	YAL048C	SAH1	P39954	449 aa	Known RBP	4.73	□□□□□ -1.65
GEM1	YAL048C	CIT3	P43635	486 aa		4.73	□□□□□ -1.65
GEM1	YAL048C	MPP10	P47083	593 aa	Known RBP	4.73	□□□□□ -1.65
GEM1	YAL048C	THS1	P04801	734 aa	Known RBP	4.73	□□□□□ -1.65
GEM1	YAL048C	DAL5	P15365	543 aa		4.73	□□□□□ -1.65
GEM1	YAL048C	NFU1	P32860	256 aa		4.73	□□□□□ -1.65
GEM1	YAL048C	YRO2	P38079	344 aa		4.73	□□□□□ -1.65
GEM1	YAL048C	PIK1	P39104	1066 aa		4.73	□□□□□ -1.65
GEM1	YAL048C	SRP1	Q02821	542 aa	Known RBP	4.73	□□□□□ -1.65
GEM1	YAL048C	PHM7	Q12252	991 aa		4.73	□□□□□ -1.65
GEM1	YAL048C	YRF1-1	P0CX20	1796 aa		4.73	□□□□□ -1.65
GEM1	YAL048C	YRF1-5	P0CX21	1796 aa		4.73	□□□□□ -1.65
GEM1	YAL048C	YRF1-8	P0CX22	1796 aa		4.73	□□□□□ -1.65
GEM1	YAL048C	TY2B-B	Q12491	1770 aa		4.73	□□□□□ -1.65
GEM1	YAL048C	SPP41	P38904	1435 aa		4.72	□□□□□ -1.65
GEM1	YAL048C	DOM34	P33309	386 aa		4.72	□□□□□ -1.65
GEM1	YAL048C	SKN7	P38889	622 aa		4.72	□□□□□ -1.65
GEM1	YAL048C	OYE3	P41816	400 aa	Predicted RBP	4.72	□□□□□ -1.65
GEM1	YAL048C	SMC4	Q12267	1418 aa		4.72	□□□□□ -1.65
GEM1	YAL048C	NTE1	Q04958	1679 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms