RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A RFC5P38251 354 aa9.15□□□□□ -0.94
TGA1tA(UGC)A ALD5P40047 520 aaKnown RBP9.15□□□□□ -0.94
TGA1tA(UGC)A INP51P40559 946 aaKnown RBP9.15□□□□□ -0.94
TGA1tA(UGC)A PSP2P50109 593 aaKnown RBP9.15□□□□□ -0.94
TGA1tA(UGC)A YGR035CP53222 116 aa9.15□□□□□ -0.94
TGA1tA(UGC)A FAR11P53917 953 aa9.15□□□□□ -0.94
TGA1tA(UGC)A ROD1Q02805 837 aa9.15□□□□□ -0.94
TGA1tA(UGC)A COQ9Q05779 260 aa9.15□□□□□ -0.94
TGA1tA(UGC)A YOR296WQ08748 1289 aa9.15□□□□□ -0.94
TGA1tA(UGC)A RLF2Q12495 606 aa9.15□□□□□ -0.94
TGA1tA(UGC)A DED1P06634 604 aaKnown RBP9.14□□□□□ -0.95
TGA1tA(UGC)A MCM3P24279 971 aaKnown RBP9.14□□□□□ -0.95
TGA1tA(UGC)A URA1P28272 314 aaPredicted RBP9.14□□□□□ -0.95
TGA1tA(UGC)A MSS51P32335 436 aa9.14□□□□□ -0.95
TGA1tA(UGC)A AVT3P36062 692 aa9.14□□□□□ -0.95
TGA1tA(UGC)A SRD1P09007 221 aa9.13□□□□□ -0.95
TGA1tA(UGC)A YEL076C-AP0CX16 216 aa9.13□□□□□ -0.95
TGA1tA(UGC)A YLR464WP0CX17 216 aa9.13□□□□□ -0.95
TGA1tA(UGC)A YEL076CP39971 216 aa9.13□□□□□ -0.95
TGA1tA(UGC)A NCR1Q12200 1170 aa9.13□□□□□ -0.95
TGA1tA(UGC)A MBR1P23493 339 aa9.12□□□□□ -0.95
TGA1tA(UGC)A MAL33P38157 468 aa9.12□□□□□ -0.95
TGA1tA(UGC)A GUA1P38625 525 aaKnown RBP9.12□□□□□ -0.95
TGA1tA(UGC)A THI6P41835 540 aa9.12□□□□□ -0.95
TGA1tA(UGC)A DAK2P43550 591 aa9.12□□□□□ -0.95
TGA1tA(UGC)A PGA2P53903 129 aa9.12□□□□□ -0.95
TGA1tA(UGC)A CKA2P19454 339 aa9.11□□□□□ -0.95
TGA1tA(UGC)A FUB1P25659 250 aa9.11□□□□□ -0.95
TGA1tA(UGC)A PRX1P34227 261 aaKnown RBP9.11□□□□□ -0.95
TGA1tA(UGC)A JHD1P40034 492 aa9.11□□□□□ -0.95
TGA1tA(UGC)A RSC8P43609 557 aaKnown RBP9.11□□□□□ -0.95
TGA1tA(UGC)A CBK1P53894 756 aa9.11□□□□□ -0.95
TGA1tA(UGC)A ADY4Q05955 493 aa9.11□□□□□ -0.95
TGA1tA(UGC)A SMC6Q12749 1114 aa9.11□□□□□ -0.95
TGA1tA(UGC)A YLR422WQ06409 1932 aa9.1□□□□□ -0.95
TGA1tA(UGC)A TCP1P12612 559 aaKnown RBP9.1□□□□□ -0.95
TGA1tA(UGC)A CDC48P25694 835 aaKnown RBP9.1□□□□□ -0.95
TGA1tA(UGC)A ULP2P40537 1034 aaPredicted RBP9.1□□□□□ -0.95
TGA1tA(UGC)A MUK1Q02866 612 aa9.1□□□□□ -0.95
TGA1tA(UGC)A TUF1P02992 437 aaKnown RBP9.09□□□□□ -0.95
TGA1tA(UGC)A SWI6P09959 803 aa9.09□□□□□ -0.95
TGA1tA(UGC)A NUP82P40368 713 aa9.09□□□□□ -0.95
TGA1tA(UGC)A SPO74P45819 413 aa9.09□□□□□ -0.95
TGA1tA(UGC)A PIL1P53252 339 aaKnown RBP9.09□□□□□ -0.95
TGA1tA(UGC)A SDA1P53313 767 aaKnown RBP9.09□□□□□ -0.95
TGA1tA(UGC)A ARK1P53974 638 aa9.09□□□□□ -0.95
TGA1tA(UGC)A EIS1Q05050 843 aaKnown RBP9.09□□□□□ -0.95
TGA1tA(UGC)A SMC5Q08204 1093 aa9.09□□□□□ -0.95
TGA1tA(UGC)A ISY1P21374 235 aaPredicted RBP9.08□□□□□ -0.96
TGA1tA(UGC)A RDS1P25611 832 aa9.08□□□□□ -0.96
TGA1tA(UGC)A TMT1P32643 299 aa9.08□□□□□ -0.96
TGA1tA(UGC)A PGM2P37012 569 aaKnown RBP9.08□□□□□ -0.96
TGA1tA(UGC)A SIP3P38717 1229 aa9.08□□□□□ -0.96
TGA1tA(UGC)A PIH1P38768 344 aa9.08□□□□□ -0.96
TGA1tA(UGC)A YAP1801P38856 637 aa9.08□□□□□ -0.96
TGA1tA(UGC)A EAF5P39995 279 aa9.08□□□□□ -0.96
TGA1tA(UGC)A CAF130P53280 1122 aaPredicted RBP9.08□□□□□ -0.96
TGA1tA(UGC)A RTC4P53850 401 aa9.08□□□□□ -0.96
TGA1tA(UGC)A SVF1Q05515 481 aa9.08□□□□□ -0.96
TGA1tA(UGC)A MMR1Q06324 491 aa9.08□□□□□ -0.96
TGA1tA(UGC)A YLH47Q06493 454 aa9.08□□□□□ -0.96
TGA1tA(UGC)A NBL1Q3E7Y6 73 aa9.08□□□□□ -0.96
TGA1tA(UGC)A FOB1O13329 566 aa9.07□□□□□ -0.96
TGA1tA(UGC)A FYV10P40492 516 aa9.07□□□□□ -0.96
TGA1tA(UGC)A AVT1P47082 602 aa9.07□□□□□ -0.96
TGA1tA(UGC)A ACF4P47129 309 aa9.07□□□□□ -0.96
TGA1tA(UGC)A CUE3P53137 624 aaKnown RBP9.07□□□□□ -0.96
TGA1tA(UGC)A HIF1Q12373 385 aa9.07□□□□□ -0.96
TGA1tA(UGC)A PCT1P13259 424 aa9.06□□□□□ -0.96
TGA1tA(UGC)A ADE2P21264 571 aaKnown RBP9.06□□□□□ -0.96
TGA1tA(UGC)A PET10P36139 283 aa9.06□□□□□ -0.96
TGA1tA(UGC)A SLX1P38324 304 aa9.06□□□□□ -0.96
TGA1tA(UGC)A UBX7P38349 436 aa9.06□□□□□ -0.96
TGA1tA(UGC)A UBA2P52488 636 aa9.06□□□□□ -0.96
TGA1tA(UGC)A NCS2P53923 493 aaPredicted RBP9.06□□□□□ -0.96
TGA1tA(UGC)A HRQ1Q05549 1077 aa9.06□□□□□ -0.96
TGA1tA(UGC)A HFI1Q12060 488 aa9.06□□□□□ -0.96
TGA1tA(UGC)A HIS4P00815 799 aaKnown RBP9.05□□□□□ -0.96
TGA1tA(UGC)A COX4P04037 155 aa9.05□□□□□ -0.96
TGA1tA(UGC)A HXK1P04806 485 aaKnown RBP9.05□□□□□ -0.96
TGA1tA(UGC)A TIF1P10081 395 aaKnown RBP9.05□□□□□ -0.96
TGA1tA(UGC)A PFK1P16861 987 aaKnown RBP9.05□□□□□ -0.96
TGA1tA(UGC)A DPH2P32461 534 aa9.05□□□□□ -0.96
TGA1tA(UGC)A DRE2P36152 348 aa9.05□□□□□ -0.96
TGA1tA(UGC)A RFT1P38206 574 aaPredicted RBP9.05□□□□□ -0.96
TGA1tA(UGC)A STB5P38699 743 aa9.05□□□□□ -0.96
TGA1tA(UGC)A ERC1P38767 581 aa9.05□□□□□ -0.96
TGA1tA(UGC)A OPT1P40897 799 aa9.05□□□□□ -0.96
TGA1tA(UGC)A JJJ3P47138 172 aa9.05□□□□□ -0.96
TGA1tA(UGC)A GCV2P49095 1034 aa9.05□□□□□ -0.96
TGA1tA(UGC)A SKY1Q03656 742 aa9.05□□□□□ -0.96
TGA1tA(UGC)A YDL057WQ07379 328 aa9.05□□□□□ -0.96
TGA1tA(UGC)A IES4Q08561 116 aa9.05□□□□□ -0.96
TGA1tA(UGC)A BIK1P11709 440 aa9.04□□□□□ -0.96
TGA1tA(UGC)A WHI2P12611 486 aa9.04□□□□□ -0.96
TGA1tA(UGC)A FRS2P15625 503 aaKnown RBP9.04□□□□□ -0.96
TGA1tA(UGC)A RGP1P16664 663 aa9.04□□□□□ -0.96
TGA1tA(UGC)A COT1P32798 439 aa9.04□□□□□ -0.96
TGA1tA(UGC)A RPN3P40016 523 aaKnown RBP9.04□□□□□ -0.96
TGA1tA(UGC)A PEX14P53112 341 aa9.04□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 106 ms