RNA–Protein interactions for RNA: YPR016C

TIF6, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene TIF6, Length 738 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF6	YPR016C	MIP1	P15801	1254 aa		10.86	□□□□□ -0.67
TIF6	YPR016C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	10.86	□□□□□ -0.67	not detected
TIF6	YPR016C	YUR1	P26725	428 aa		10.86	□□□□□ -0.67
TIF6	YPR016C	RGT1	P32862	1170 aa		10.86	□□□□□ -0.67
TIF6	YPR016C	ZPR1	P53303	486 aa	Known RBP	10.86	□□□□□ -0.67
TIF6	YPR016C	LCD1	Q04377	747 aa		10.86	□□□□□ -0.67
TIF6	YPR016C	FUS2	Q05670	677 aa		10.86	□□□□□ -0.67
TIF6	YPR016C	MET7	Q08645	548 aa		10.86	□□□□□ -0.67
TIF6	YPR016C	AFT2	Q08957	416 aa		10.86	□□□□□ -0.67
TIF6	YPR016C	CDC48	P25694	835 aa	Known RBP	10.85	□□□□□ -0.67
TIF6	YPR016C	PPS1	P38148	807 aa		10.85	□□□□□ -0.67
TIF6	YPR016C	MXR1	P40029	184 aa		10.85	□□□□□ -0.67
TIF6	YPR016C	SCS3	P53012	380 aa		10.85	□□□□□ -0.67
TIF6	YPR016C	NCS6	P53088	359 aa		10.85	□□□□□ -0.67
TIF6	YPR016C	PFK1	P16861	987 aa	Known RBP	10.84	□□□□□ -0.67
TIF6	YPR016C	RPN3	P40016	523 aa	Known RBP	10.84	□□□□□ -0.67
TIF6	YPR016C	NUP82	P40368	713 aa		10.84	□□□□□ -0.67
TIF6	YPR016C	FIS1	P40515	155 aa		10.84	□□□□□ -0.67
TIF6	YPR016C	VPS53	P47061	822 aa		10.84	□□□□□ -0.67
TIF6	YPR016C	LSC2	P53312	427 aa		10.84	□□□□□ -0.67
TIF6	YPR016C	TRM11	Q12463	433 aa		10.84	□□□□□ -0.67
TIF6	YPR016C	ECM29	P38737	1868 aa		10.84	□□□□□ -0.67
TIF6	YPR016C	PRP22	P24384	1145 aa	Known RBP	10.83	□□□□□ -0.68
TIF6	YPR016C	HMF1	P40037	129 aa	Known RBP	10.83	□□□□□ -0.68
TIF6	YPR016C	RPS7B	P48164	190 aa	Known RBP	10.83	□□□□□ -0.68
TIF6	YPR016C	YPL216W	Q08964	1102 aa		10.83	□□□□□ -0.68
TIF6	YPR016C	NCR1	Q12200	1170 aa		10.83	□□□□□ -0.68
TIF6	YPR016C	TAF13	P11747	167 aa		10.82	□□□□□ -0.68
TIF6	YPR016C	TVP38	P36164	337 aa		10.82	□□□□□ -0.68
TIF6	YPR016C	MRPL10	P36520	322 aa		10.82	□□□□□ -0.68
TIF6	YPR016C	YGR237C	P50089	785 aa		10.82	□□□□□ -0.68
TIF6	YPR016C	GPI13	Q07830	1017 aa		10.82	□□□□□ -0.68
TIF6	YPR016C	YLL058W	Q12198	575 aa		10.82	□□□□□ -0.68
TIF6	YPR016C	PSO2	P30620	661 aa		10.81	□□□□□ -0.68
TIF6	YPR016C	YKL091C	P33324	310 aa	Known RBP	10.81	□□□□□ -0.68
TIF6	YPR016C	PSY4	P38193	441 aa		10.81	□□□□□ -0.68
TIF6	YPR016C	PSF2	P40359	213 aa		10.81	□□□□□ -0.68
TIF6	YPR016C	BRE5	P53741	515 aa	Known RBP	10.81	□□□□□ -0.68
TIF6	YPR016C	HCR1	Q05775	265 aa	Known RBP	10.81	□□□□□ -0.68
TIF6	YPR016C	SPP382	Q06411	708 aa	Predicted RBP	10.81	□□□□□ -0.68
TIF6	YPR016C	ADE17	P38009	592 aa	Known RBP	10.8	□□□□□ -0.68
TIF6	YPR016C	YEL025C	P39991	1188 aa		10.8	□□□□□ -0.68
TIF6	YPR016C	NCS2	P53923	493 aa	Predicted RBP	10.8	□□□□□ -0.68
TIF6	YPR016C	GFD1	Q04839	188 aa	Known RBP	10.8	□□□□□ -0.68
TIF6	YPR016C	YDL057W	Q07379	328 aa		10.8	□□□□□ -0.68
TIF6	YPR016C	YOL075C	Q08234	1294 aa		10.8	□□□□□ -0.68
TIF6	YPR016C	ICL2	Q12031	575 aa		10.8	□□□□□ -0.68
TIF6	YPR016C	PDC1	P06169	563 aa	Known RBP	10.79	□□□□□ -0.68
TIF6	YPR016C	POX1	P13711	748 aa		10.79	□□□□□ -0.68
TIF6	YPR016C	PGM2	P37012	569 aa	Known RBP	10.79	□□□□□ -0.68
TIF6	YPR016C	FLR1	P38124	548 aa		10.79	□□□□□ -0.68
TIF6	YPR016C	BCD1	P38772	366 aa		10.79	□□□□□ -0.68
TIF6	YPR016C	TOF1	P53840	1238 aa		10.79	□□□□□ -0.68
TIF6	YPR016C	ARK1	P53974	638 aa		10.79	□□□□□ -0.68
TIF6	YPR016C	WAR1	Q03631	944 aa		10.79	□□□□□ -0.68
TIF6	YPR016C	TMA16	Q08687	178 aa		10.79	□□□□□ -0.68
TIF6	YPR016C	CDC37	P06101	506 aa	Known RBP	10.78	□□□□□ -0.68
TIF6	YPR016C	MAS2	P11914	482 aa		10.78	□□□□□ -0.68
TIF6	YPR016C	TCP1	P12612	559 aa	Known RBP	10.78	□□□□□ -0.68
TIF6	YPR016C	OM45	P16547	393 aa		10.78	□□□□□ -0.68
TIF6	YPR016C	DBP1	P24784	617 aa	Known RBP	10.78	□□□□□ -0.68
TIF6	YPR016C	ATG19	P35193	415 aa		10.78	□□□□□ -0.68
TIF6	YPR016C	MIC60	P36112	540 aa		10.78	□□□□□ -0.68
TIF6	YPR016C	BIM1	P40013	344 aa		10.78	□□□□□ -0.68
TIF6	YPR016C	YFL034W	P43564	1073 aa		10.78	□□□□□ -0.68
TIF6	YPR016C	SEC5	P89102	971 aa		10.78	□□□□□ -0.68
TIF6	YPR016C	NOC3	Q07896	663 aa	Predicted RBP	10.78	□□□□□ -0.68
TIF6	YPR016C	DED1	P06634	604 aa	Known RBP	10.77	□□□□□ -0.69
TIF6	YPR016C	DBP5	P20449	482 aa	Known RBP	10.77	□□□□□ -0.69
TIF6	YPR016C	DAL7	P21826	554 aa		10.77	□□□□□ -0.69
TIF6	YPR016C	MRC1	P25588	1096 aa		10.77	□□□□□ -0.69
TIF6	YPR016C	BCS1	P32839	456 aa		10.77	□□□□□ -0.69
TIF6	YPR016C	ERC1	P38767	581 aa		10.77	□□□□□ -0.69
TIF6	YPR016C	TOS3	P43637	560 aa		10.77	□□□□□ -0.69
TIF6	YPR016C	NBP1	P52919	319 aa	Predicted RBP	10.77	□□□□□ -0.69
TIF6	YPR016C	EBS1	Q03466	884 aa	Known RBP	10.77	□□□□□ -0.69
TIF6	YPR016C	YPR148C	Q06523	435 aa		10.77	□□□□□ -0.69
TIF6	YPR016C	SMC5	Q08204	1093 aa		10.77	□□□□□ -0.69
TIF6	YPR016C	YPL277C	Q08989	487 aa		10.77	□□□□□ -0.69
TIF6	YPR016C	IRE1	P32361	1115 aa		10.76	□□□□□ -0.69
TIF6	YPR016C	YET1	P35723	206 aa		10.76	□□□□□ -0.69
TIF6	YPR016C	HUL4	P40985	892 aa		10.76	□□□□□ -0.69
TIF6	YPR016C	AIP1	P46680	615 aa	Known RBP	10.76	□□□□□ -0.69
TIF6	YPR016C	YJR107W	P47145	328 aa		10.76	□□□□□ -0.69
TIF6	YPR016C	PSP2	P50109	593 aa	Known RBP	10.76	□□□□□ -0.69
TIF6	YPR016C	MDR1	P53258	950 aa		10.76	□□□□□ -0.69
TIF6	YPR016C	YOR131C	Q12486	218 aa		10.76	□□□□□ -0.69
TIF6	YPR016C	PCK1	P10963	549 aa		10.75	□□□□□ -0.69
TIF6	YPR016C	TIM23	P32897	222 aa		10.75	□□□□□ -0.69
TIF6	YPR016C	YEL1	P34225	687 aa		10.75	□□□□□ -0.69
TIF6	YPR016C	KSP1	P38691	1029 aa	Known RBP	10.75	□□□□□ -0.69
TIF6	YPR016C	MGA2	P40578	1113 aa		10.75	□□□□□ -0.69
TIF6	YPR016C	SKP2	P42843	763 aa		10.75	□□□□□ -0.69
TIF6	YPR016C	AVT1	P47082	602 aa		10.75	□□□□□ -0.69
TIF6	YPR016C	ULP1	Q02724	621 aa		10.75	□□□□□ -0.69
TIF6	YPR016C	ROD1	Q02805	837 aa		10.75	□□□□□ -0.69
TIF6	YPR016C	SUT2	Q12286	268 aa		10.75	□□□□□ -0.69
TIF6	YPR016C	KIN82	P25341	720 aa		10.74	□□□□□ -0.69
TIF6	YPR016C	TRK2	P28584	889 aa		10.74	□□□□□ -0.69
TIF6	YPR016C	MRF1	P30775	413 aa	Predicted RBP	10.74	□□□□□ -0.69

Retrieved 100 of 5,963 RNA–protein pairs in 74.9 ms