RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W YDR306CQ06640 478 aa7.57□□□□□ -1.2
CIT3YPR001W IOC2Q12072 812 aa7.57□□□□□ -1.2
CIT3YPR001W CLF1Q12309 687 aaPredicted RBP7.57□□□□□ -1.2
CIT3YPR001W DED1P06634 604 aaKnown RBP7.56□□□□□ -1.2
CIT3YPR001W HOM3P10869 527 aa7.56□□□□□ -1.2
CIT3YPR001W PFK1P16861 987 aaKnown RBP7.56□□□□□ -1.2
CIT3YPR001W DBP5P20449 482 aaKnown RBP7.56□□□□□ -1.2
CIT3YPR001W AAR2P32357 355 aaPredicted RBP7.56□□□□□ -1.2
CIT3YPR001W MRT4P33201 236 aaKnown RBP7.56□□□□□ -1.2
CIT3YPR001W NMD3P38861 518 aaKnown RBP7.56□□□□□ -1.2
CIT3YPR001W TIF11P38912 153 aaKnown RBP7.56□□□□□ -1.2
CIT3YPR001W NPY1P53164 384 aa7.56□□□□□ -1.2
CIT3YPR001W YNR063WP53749 607 aa7.56□□□□□ -1.2
CIT3YPR001W CAF120P53836 1060 aa7.56□□□□□ -1.2
CIT3YPR001W COG8Q04632 607 aa7.56□□□□□ -1.2
CIT3YPR001W PUS5Q06244 254 aa7.56□□□□□ -1.2
CIT3YPR001W YDL129WQ07555 291 aa7.56□□□□□ -1.2
CIT3YPR001W YPR071WQ12346 211 aa7.56□□□□□ -1.2
CIT3YPR001W MSS18P08593 268 aa7.55□□□□□ -1.2
CIT3YPR001W HVG1P0CE11 249 aa7.55□□□□□ -1.2
CIT3YPR001W SPC29P33419 253 aa7.55□□□□□ -1.2
CIT3YPR001W BIT2P38346 545 aa7.55□□□□□ -1.2
CIT3YPR001W GUS1P46655 708 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
CIT3YPR001W MNN11P46985 422 aaKnown RBP7.55□□□□□ -1.2
CIT3YPR001W GTR1Q00582 310 aa7.55□□□□□ -1.2
CIT3YPR001W EST2Q06163 884 aa7.55□□□□□ -1.2
CIT3YPR001W RPS31P05759 152 aaKnown RBP7.55□□□□□ -1.2
CIT3YPR001W YER152CP10356 443 aa7.55□□□□□ -1.2
CIT3YPR001W URA1P28272 314 aaPredicted RBP7.55□□□□□ -1.2
CIT3YPR001W MRF1P30775 413 aaPredicted RBP7.55□□□□□ -1.2
CIT3YPR001W HEM12P32347 362 aaPredicted RBP7.55□□□□□ -1.2
CIT3YPR001W DAL3P32459 195 aa7.55□□□□□ -1.2
CIT3YPR001W NUP120P35729 1037 aa7.55□□□□□ -1.2
CIT3YPR001W RKM3P38222 552 aa7.55□□□□□ -1.2
CIT3YPR001W SIT1P39980 628 aa7.55□□□□□ -1.2
CIT3YPR001W EMP65P40085 556 aa7.55□□□□□ -1.2
CIT3YPR001W JJJ2P46997 583 aa7.55□□□□□ -1.2
CIT3YPR001W TRS130Q03660 1102 aa7.55□□□□□ -1.2
CIT3YPR001W SPO71Q03868 1245 aa7.55□□□□□ -1.2
CIT3YPR001W RTG1P32607 177 aa7.54□□□□□ -1.2
CIT3YPR001W BEM3P32873 1128 aa7.54□□□□□ -1.2
CIT3YPR001W PEX5P35056 612 aa7.54□□□□□ -1.2
CIT3YPR001W YKL050CP35736 922 aa7.54□□□□□ -1.2
CIT3YPR001W PCM1P38628 557 aaKnown RBP7.54□□□□□ -1.2
CIT3YPR001W APE4P38821 490 aa7.54□□□□□ -1.2
CIT3YPR001W RGA1P39083 1007 aa7.54□□□□□ -1.2
CIT3YPR001W RAT1Q02792 1006 aaKnown RBP7.54□□□□□ -1.2
CIT3YPR001W SDH5Q08230 162 aa7.54□□□□□ -1.2
CIT3YPR001W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.53□□□□□ -1.2not detected
CIT3YPR001W STO1P34160 861 aaKnown RBP7.53□□□□□ -1.2
CIT3YPR001W EXO5P38289 585 aa7.53□□□□□ -1.2
CIT3YPR001W VPS8P39702 1274 aa7.53□□□□□ -1.2
CIT3YPR001W PTC2P39966 464 aaKnown RBP7.53□□□□□ -1.2
CIT3YPR001W DOT6P40059 670 aaKnown RBP7.53□□□□□ -1.2
CIT3YPR001W SIP5P40210 489 aaKnown RBP7.53□□□□□ -1.2
CIT3YPR001W ERR3P42222 437 aa7.53□□□□□ -1.2
CIT3YPR001W QRI7P43122 407 aa7.53□□□□□ -1.2
CIT3YPR001W CAF16P43569 289 aa7.53□□□□□ -1.2
CIT3YPR001W HNT2P49775 206 aa7.53□□□□□ -1.2
CIT3YPR001W MEP3P53390 489 aa7.53□□□□□ -1.2
CIT3YPR001W HSP82P02829 709 aaKnown RBP7.52□□□□□ -1.21
CIT3YPR001W MSM1P22438 575 aa7.52□□□□□ -1.21
CIT3YPR001W SHM1P37292 490 aaPredicted RBP7.52□□□□□ -1.21
CIT3YPR001W SLD3P53135 668 aa7.52□□□□□ -1.21
CIT3YPR001W CUS1Q02554 436 aaPredicted RBP7.52□□□□□ -1.21
CIT3YPR001W RCF1Q03713 159 aa7.52□□□□□ -1.21
CIT3YPR001W COX11P19516 300 aaKnown RBP7.51□□□□□ -1.21
CIT3YPR001W RER1P25560 188 aa7.51□□□□□ -1.21
CIT3YPR001W YKL077WP36081 392 aa7.51□□□□□ -1.21
CIT3YPR001W DID4P36108 232 aa7.51□□□□□ -1.21
CIT3YPR001W SSN3P39073 555 aa7.51□□□□□ -1.21
CIT3YPR001W MPH1P40562 993 aa7.51□□□□□ -1.21
CIT3YPR001W VNX1P42839 908 aa7.51□□□□□ -1.21
CIT3YPR001W SGM1P47166 707 aa7.51□□□□□ -1.21
CIT3YPR001W SPO21Q12411 609 aa7.51□□□□□ -1.21
CIT3YPR001W SSM4P40318 1319 aa7.51□□□□□ -1.21
CIT3YPR001W RET1P22276 1149 aaKnown RBP7.5□□□□□ -1.21
CIT3YPR001W PPH3P32345 308 aa7.5□□□□□ -1.21
CIT3YPR001W SPT23P35210 1082 aa7.5□□□□□ -1.21
CIT3YPR001W PSY4P38193 441 aa7.5□□□□□ -1.21
CIT3YPR001W YGR153WP48238 217 aa7.5□□□□□ -1.21
CIT3YPR001W ATG33Q06485 197 aa7.5□□□□□ -1.21
CIT3YPR001W SPN1Q06505 410 aaPredicted RBP7.5□□□□□ -1.21
CIT3YPR001W PEX15Q08215 383 aa7.5□□□□□ -1.21
CIT3YPR001W ADD66P36040 267 aa7.49□□□□□ -1.21
CIT3YPR001W SKP1P52286 194 aa7.49□□□□□ -1.21
CIT3YPR001W LCD1Q04377 747 aa7.49□□□□□ -1.21
CIT3YPR001W NHA1Q99271 985 aa7.49□□□□□ -1.21
CIT3YPR001W VMA8P32610 256 aaKnown RBP7.49□□□□□ -1.21
CIT3YPR001W SMY2P32909 740 aaKnown RBP7.49□□□□□ -1.21
CIT3YPR001W BCD1P38772 366 aa7.49□□□□□ -1.21
CIT3YPR001W MSN5P52918 1224 aa7.49□□□□□ -1.21
CIT3YPR001W AIM14P53109 570 aa7.49□□□□□ -1.21
CIT3YPR001W HOL1P53389 586 aa7.49□□□□□ -1.21
CIT3YPR001W ERO1Q03103 563 aa7.49□□□□□ -1.21
CIT3YPR001W SKY1Q03656 742 aa7.49□□□□□ -1.21
CIT3YPR001W YDR344CQ05510 147 aa7.49□□□□□ -1.21
CIT3YPR001W DUS3Q06053 668 aaKnown RBP7.49□□□□□ -1.21
CIT3YPR001W RSC3Q06639 885 aa7.49□□□□□ -1.21
CIT3YPR001W PUS1Q12211 544 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms