RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C FOB1O13329 566 aa8.96□□□□□ -0.98
LSP1YPL004C TUF1P02992 437 aaKnown RBP8.96□□□□□ -0.98
LSP1YPL004C HXK1P04806 485 aaKnown RBP8.96□□□□□ -0.98
LSP1YPL004C CKA2P19454 339 aa8.96□□□□□ -0.98
LSP1YPL004C AFT1P22149 690 aa8.96□□□□□ -0.98
LSP1YPL004C RIM101P33400 625 aa8.96□□□□□ -0.98
LSP1YPL004C HYR1P40581 163 aaKnown RBP8.96□□□□□ -0.98
LSP1YPL004C CUE3P53137 624 aaKnown RBP8.96□□□□□ -0.98
LSP1YPL004C MMR1Q06324 491 aa8.96□□□□□ -0.98
LSP1YPL004C LDB19Q12502 818 aa8.96□□□□□ -0.98
LSP1YPL004C SRD1P09007 221 aa8.95□□□□□ -0.98
LSP1YPL004C RGP1P16664 663 aa8.95□□□□□ -0.98
LSP1YPL004C UBC1P21734 215 aaKnown RBP8.95□□□□□ -0.98
LSP1YPL004C YKR023WP36119 530 aaKnown RBP8.95□□□□□ -0.98
LSP1YPL004C RFT1P38206 574 aaPredicted RBP8.95□□□□□ -0.98
LSP1YPL004C HST1P53685 503 aa8.95□□□□□ -0.98
LSP1YPL004C CBK1P53894 756 aa8.95□□□□□ -0.98
LSP1YPL004C SVF1Q05515 481 aa8.95□□□□□ -0.98
LSP1YPL004C GPI13Q07830 1017 aa8.95□□□□□ -0.98
LSP1YPL004C YEL076C-AP0CX16 216 aa8.94□□□□□ -0.98
LSP1YPL004C YLR464WP0CX17 216 aa8.94□□□□□ -0.98
LSP1YPL004C ELM1P32801 640 aa8.94□□□□□ -0.98
LSP1YPL004C DUR3P33413 735 aa8.94□□□□□ -0.98
LSP1YPL004C YEL076CP39971 216 aa8.94□□□□□ -0.98
LSP1YPL004C NUP82P40368 713 aa8.94□□□□□ -0.98
LSP1YPL004C PSP2P50109 593 aaKnown RBP8.94□□□□□ -0.98
LSP1YPL004C PGA2P53903 129 aa8.94□□□□□ -0.98
LSP1YPL004C ADY4Q05955 493 aa8.94□□□□□ -0.98
LSP1YPL004C YLH47Q06493 454 aa8.94□□□□□ -0.98
LSP1YPL004C YDR524C-BQ3E6R4 66 aa8.94□□□□□ -0.98
LSP1YPL004C VPS24P36095 224 aaKnown RBP8.93□□□□□ -0.98
LSP1YPL004C ALD5P40047 520 aaKnown RBP8.93□□□□□ -0.98
LSP1YPL004C FYV10P40492 516 aa8.93□□□□□ -0.98
LSP1YPL004C UBA2P52488 636 aa8.93□□□□□ -0.98
LSP1YPL004C DED1P06634 604 aaKnown RBP8.92□□□□□ -0.98
LSP1YPL004C FRS2P15625 503 aaKnown RBP8.92□□□□□ -0.98
LSP1YPL004C MIP1P15801 1254 aa8.92□□□□□ -0.98
LSP1YPL004C ISY1P21374 235 aaPredicted RBP8.92□□□□□ -0.98
LSP1YPL004C BMH1P29311 267 aaKnown RBP8.92□□□□□ -0.98
LSP1YPL004C IRE1P32361 1115 aa8.92□□□□□ -0.98
LSP1YPL004C PET10P36139 283 aa8.92□□□□□ -0.98
LSP1YPL004C SIP3P38717 1229 aa8.92□□□□□ -0.98
LSP1YPL004C AZR1P50080 613 aa8.92□□□□□ -0.98
LSP1YPL004C YGL081WP53156 320 aa8.92□□□□□ -0.98
LSP1YPL004C CUS1Q02554 436 aaPredicted RBP8.92□□□□□ -0.98
LSP1YPL004C ROD1Q02805 837 aa8.92□□□□□ -0.98
LSP1YPL004C COQ9Q05779 260 aa8.92□□□□□ -0.98
LSP1YPL004C PEX19Q07418 342 aa8.92□□□□□ -0.98
LSP1YPL004C SMC5Q08204 1093 aa8.92□□□□□ -0.98
LSP1YPL004C HIS4P00815 799 aaKnown RBP8.91□□□□□ -0.98
LSP1YPL004C TCP1P12612 559 aaKnown RBP8.91□□□□□ -0.98
LSP1YPL004C CDC48P25694 835 aaKnown RBP8.91□□□□□ -0.98
LSP1YPL004C EFT1P32324 842 aaKnown RBP8.91□□□□□ -0.98
LSP1YPL004C SMY2P32909 740 aaKnown RBP8.91□□□□□ -0.98
LSP1YPL004C GRS1P38088 690 aaKnown RBP8.91□□□□□ -0.98
LSP1YPL004C ULP2P40537 1034 aaPredicted RBP8.91□□□□□ -0.98
LSP1YPL004C VTC2P43585 828 aa8.91□□□□□ -0.98
LSP1YPL004C VPS72Q03388 795 aa8.91□□□□□ -0.98
LSP1YPL004C UBR2Q07963 1872 aa8.91□□□□□ -0.98
LSP1YPL004C RPL22AP05749 121 aaKnown RBP8.9□□□□□ -0.98
LSP1YPL004C MSS51P32335 436 aa8.9□□□□□ -0.98
LSP1YPL004C PIH1P38768 344 aa8.9□□□□□ -0.98
LSP1YPL004C RPN3P40016 523 aaKnown RBP8.9□□□□□ -0.98
LSP1YPL004C COG8Q04632 607 aa8.9□□□□□ -0.98
LSP1YPL004C NCR1Q12200 1170 aa8.9□□□□□ -0.98
LSP1YPL004C DDP1Q99321 188 aaKnown RBP8.9□□□□□ -0.98
LSP1YPL004C POT1P27796 417 aaKnown RBP RIP-Chip data8.89□□□□□ -0.99not detected
LSP1YPL004C HIR1P32479 840 aa8.89□□□□□ -0.99
LSP1YPL004C ATG19P35193 415 aa8.89□□□□□ -0.99
LSP1YPL004C TVP23P38962 199 aa8.89□□□□□ -0.99
LSP1YPL004C PFK1P16861 987 aaKnown RBP8.88□□□□□ -0.99
LSP1YPL004C RAM2P29703 316 aa8.88□□□□□ -0.99
LSP1YPL004C PGM2P37012 569 aaKnown RBP8.88□□□□□ -0.99
LSP1YPL004C POA1P38218 177 aa8.88□□□□□ -0.99
LSP1YPL004C GUA1P38625 525 aaKnown RBP8.88□□□□□ -0.99
LSP1YPL004C EAF5P39995 279 aa8.88□□□□□ -0.99
LSP1YPL004C CCT5P40413 562 aaKnown RBP8.88□□□□□ -0.99
LSP1YPL004C CIR1P42940 261 aa8.88□□□□□ -0.99
LSP1YPL004C JJJ3P47138 172 aa8.88□□□□□ -0.99
LSP1YPL004C SGM1P47166 707 aa8.88□□□□□ -0.99
LSP1YPL004C GUP1P53154 560 aa8.88□□□□□ -0.99
LSP1YPL004C CAF130P53280 1122 aaPredicted RBP8.88□□□□□ -0.99
LSP1YPL004C NCS2P53923 493 aaPredicted RBP8.88□□□□□ -0.99
LSP1YPL004C SEC5P89102 971 aa8.88□□□□□ -0.99
LSP1YPL004C HAP5Q02516 242 aa8.88□□□□□ -0.99
LSP1YPL004C EAR1Q03212 550 aa8.88□□□□□ -0.99
LSP1YPL004C HIF1Q12373 385 aa8.88□□□□□ -0.99
LSP1YPL004C YPR117WQ06116 2489 aa8.87□□□□□ -0.99
LSP1YPL004C COT1P32798 439 aa8.87□□□□□ -0.99
LSP1YPL004C SAD1P43589 448 aa8.87□□□□□ -0.99
LSP1YPL004C ACF4P47129 309 aa8.87□□□□□ -0.99
LSP1YPL004C ARK1P53974 638 aa8.87□□□□□ -0.99
LSP1YPL004C HFI1Q12060 488 aa8.87□□□□□ -0.99
LSP1YPL004C KEX1P09620 729 aa8.86□□□□□ -0.99
LSP1YPL004C DBP5P20449 482 aaKnown RBP8.86□□□□□ -0.99
LSP1YPL004C SIS1P25294 352 aaKnown RBP8.86□□□□□ -0.99
LSP1YPL004C BRL1P38770 471 aa8.86□□□□□ -0.99
LSP1YPL004C SNF7P39929 240 aaKnown RBP8.86□□□□□ -0.99
LSP1YPL004C FOL2P51601 243 aaKnown RBP8.86□□□□□ -0.99
LSP1YPL004C CUR1Q06469 252 aa8.86□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms