RNA–Protein interactions for RNA: YOR260W

GCD1, Transcript of Gamma subunit of the translation initiation factor eIF2B, yeast

Gene GCD1, Length 1,737 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD1	YOR260W	TYW3	P53177	273 aa		4.98	□□□□□ -1.61
GCD1	YOR260W	YLR225C	Q05948	407 aa	Known RBP	4.98	□□□□□ -1.61
GCD1	YOR260W	RPS13	P05756	151 aa	Known RBP	4.97	□□□□□ -1.61
GCD1	YOR260W	PRI2	P20457	528 aa		4.97	□□□□□ -1.61
GCD1	YOR260W	LYP1	P32487	611 aa		4.97	□□□□□ -1.61
GCD1	YOR260W	YKL069W	P36088	180 aa		4.97	□□□□□ -1.61
GCD1	YOR260W	ESC8	Q08119	714 aa		4.97	□□□□□ -1.61
GCD1	YOR260W	YPL277C	Q08989	487 aa		4.97	□□□□□ -1.61
GCD1	YOR260W	YPL066W	Q12194	479 aa		4.97	□□□□□ -1.61
GCD1	YOR260W	BAS1	P22035	811 aa		4.97	□□□□□ -1.61
GCD1	YOR260W	CYC1	P00044	109 aa	Predicted RBP	4.96	□□□□□ -1.62
GCD1	YOR260W	RFC5	P38251	354 aa		4.96	□□□□□ -1.62
GCD1	YOR260W	SGD1	Q06132	899 aa		4.96	□□□□□ -1.62
GCD1	YOR260W	BRE1	Q07457	700 aa	Known RBP	4.96	□□□□□ -1.62
GCD1	YOR260W	RPL11A	P0C0W9	174 aa	Known RBP	4.95	□□□□□ -1.62
GCD1	YOR260W	INO1	P11986	533 aa		4.95	□□□□□ -1.62
GCD1	YOR260W	YCR015C	P25616	317 aa		4.95	□□□□□ -1.62
GCD1	YOR260W	ABD1	P32783	436 aa	Predicted RBP	4.95	□□□□□ -1.62
GCD1	YOR260W	PMC1	P38929	1173 aa	Predicted RBP	4.95	□□□□□ -1.62
GCD1	YOR260W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
GCD1	YOR260W	MXR1	P40029	184 aa		4.95	□□□□□ -1.62
GCD1	YOR260W	YDR132C	Q03900	495 aa		4.95	□□□□□ -1.62
GCD1	YOR260W	SVS1	Q12254	260 aa		4.95	□□□□□ -1.62
GCD1	YOR260W	RIB2	Q12362	591 aa	Known RBP	4.95	□□□□□ -1.62
GCD1	YOR260W	RPL11B	Q3E757	174 aa	Predicted RBP	4.95	□□□□□ -1.62
GCD1	YOR260W	TOD6	P34219	525 aa		4.94	□□□□□ -1.62
GCD1	YOR260W	ATG13	Q06628	738 aa		4.94	□□□□□ -1.62
GCD1	YOR260W	OPI10	Q08202	246 aa		4.94	□□□□□ -1.62
GCD1	YOR260W	YOR352W	Q08816	343 aa		4.94	□□□□□ -1.62
GCD1	YOR260W	ACM1	Q08981	209 aa		4.94	□□□□□ -1.62
GCD1	YOR260W	RPA135	P22138	1203 aa	Known RBP	4.94	□□□□□ -1.62
GCD1	YOR260W	DBP2	P24783	546 aa	Known RBP	4.94	□□□□□ -1.62
GCD1	YOR260W	UGA2	P38067	497 aa		4.94	□□□□□ -1.62
GCD1	YOR260W	FLR1	P38124	548 aa		4.94	□□□□□ -1.62
GCD1	YOR260W	LAM1	P38851	1228 aa		4.94	□□□□□ -1.62
GCD1	YOR260W	AIM21	P40563	679 aa		4.94	□□□□□ -1.62
GCD1	YOR260W	TAF1	P46677	1066 aa		4.94	□□□□□ -1.62
GCD1	YOR260W	RSM24	Q03976	319 aa		4.94	□□□□□ -1.62
GCD1	YOR260W	FAL1	Q12099	399 aa	Known RBP	4.94	□□□□□ -1.62
GCD1	YOR260W	RKM4	Q12504	494 aa		4.94	□□□□□ -1.62
GCD1	YOR260W	YKL222C	P35995	705 aa		4.93	□□□□□ -1.62
GCD1	YOR260W	PNT1	P38969	423 aa		4.93	□□□□□ -1.62
GCD1	YOR260W	MEF2	P39677	819 aa		4.93	□□□□□ -1.62
GCD1	YOR260W	YGL176C	P46945	554 aa		4.93	□□□□□ -1.62
GCD1	YOR260W	GAL11	P19659	1081 aa		4.92	□□□□□ -1.62
GCD1	YOR260W	SRM1	P21827	482 aa		4.92	□□□□□ -1.62
GCD1	YOR260W	SLA2	P33338	968 aa		4.92	□□□□□ -1.62
GCD1	YOR260W	TOM20	P35180	183 aa		4.92	□□□□□ -1.62
GCD1	YOR260W	NMD2	P38798	1089 aa	Known RBP	4.92	□□□□□ -1.62
GCD1	YOR260W	TY4A-J	P47023	414 aa		4.92	□□□□□ -1.62
GCD1	YOR260W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
GCD1	YOR260W	GCN5	Q03330	439 aa		4.92	□□□□□ -1.62
GCD1	YOR260W	SIZ1	Q04195	904 aa		4.92	□□□□□ -1.62
GCD1	YOR260W	SPP382	Q06411	708 aa	Predicted RBP	4.92	□□□□□ -1.62
GCD1	YOR260W	BI4	P03879	638 aa		4.92	□□□□□ -1.62
GCD1	YOR260W	CMP2	P14747	604 aa		4.92	□□□□□ -1.62
GCD1	YOR260W	DAL5	P15365	543 aa		4.92	□□□□□ -1.62
GCD1	YOR260W	ACE2	P21192	770 aa		4.92	□□□□□ -1.62
GCD1	YOR260W	YKL107W	P34251	309 aa		4.92	□□□□□ -1.62
GCD1	YOR260W	GEM1	P39722	662 aa		4.92	□□□□□ -1.62
GCD1	YOR260W	SIP5	P40210	489 aa	Known RBP	4.92	□□□□□ -1.62
GCD1	YOR260W	SPO20	Q04359	397 aa		4.92	□□□□□ -1.62
GCD1	YOR260W	FPR4	Q06205	392 aa	Predicted RBP	4.92	□□□□□ -1.62
GCD1	YOR260W	GAL10	P04397	699 aa		4.91	□□□□□ -1.62
GCD1	YOR260W	KIN2	P13186	1147 aa	Known RBP	4.91	□□□□□ -1.62
GCD1	YOR260W	GIP4	P39732	760 aa		4.91	□□□□□ -1.62
GCD1	YOR260W	PLB2	Q03674	706 aa		4.91	□□□□□ -1.62
GCD1	YOR260W	ROT1	Q03691	256 aa		4.91	□□□□□ -1.62
GCD1	YOR260W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.62	not detected
GCD1	YOR260W	APL1	P27351	700 aa		4.9	□□□□□ -1.62
GCD1	YOR260W	RRT14	P40470	206 aa		4.9	□□□□□ -1.62
GCD1	YOR260W	SPT20	P50875	604 aa		4.9	□□□□□ -1.62
GCD1	YOR260W	SSF2	Q12153	453 aa	Predicted RBP	4.9	□□□□□ -1.62
GCD1	YOR260W	CAB3	P36076	571 aa		4.89	□□□□□ -1.63
GCD1	YOR260W	MBP1	P39678	833 aa		4.89	□□□□□ -1.63
GCD1	YOR260W	RNH70	P53331	553 aa		4.89	□□□□□ -1.63
GCD1	YOR260W	DUS4	Q06063	367 aa		4.89	□□□□□ -1.63
GCD1	YOR260W	THS1	P04801	734 aa	Known RBP	4.89	□□□□□ -1.63
GCD1	YOR260W	AGP1	P25376	633 aa		4.89	□□□□□ -1.63
GCD1	YOR260W	STE5	P32917	917 aa		4.89	□□□□□ -1.63
GCD1	YOR260W	MPE1	P35728	441 aa	Known RBP	4.89	□□□□□ -1.63
GCD1	YOR260W	VBA5	P36172	582 aa		4.89	□□□□□ -1.63
GCD1	YOR260W	SPF1	P39986	1215 aa	Known RBP	4.89	□□□□□ -1.63
GCD1	YOR260W	MSC2	Q03455	724 aa		4.89	□□□□□ -1.63
GCD1	YOR260W	CLU1	Q03690	1277 aa	Known RBP	4.89	□□□□□ -1.63
GCD1	YOR260W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
GCD1	YOR260W	YLR358C	O13565	187 aa		4.88	□□□□□ -1.63
GCD1	YOR260W	GRX1	P25373	110 aa	Known RBP	4.88	□□□□□ -1.63
GCD1	YOR260W	RPS0A	P32905	252 aa	Known RBP	4.88	□□□□□ -1.63
GCD1	YOR260W	DOM34	P33309	386 aa		4.88	□□□□□ -1.63
GCD1	YOR260W	TAT2	P38967	592 aa		4.88	□□□□□ -1.63
GCD1	YOR260W	GIR2	Q03768	265 aa	Predicted RBP	4.88	□□□□□ -1.63
GCD1	YOR260W	SPA2	P23201	1466 aa	Known RBP	4.87	□□□□□ -1.63
GCD1	YOR260W	SBA1	P28707	216 aa	Known RBP	4.87	□□□□□ -1.63
GCD1	YOR260W	SNF7	P39929	240 aa	Known RBP	4.87	□□□□□ -1.63
GCD1	YOR260W	TPM2	P40414	161 aa		4.87	□□□□□ -1.63
GCD1	YOR260W	TDA5	Q06417	326 aa	Known RBP	4.87	□□□□□ -1.63
GCD1	YOR260W	WRS1	Q12109	432 aa	Known RBP	4.87	□□□□□ -1.63
GCD1	YOR260W	CDC6	P09119	513 aa		4.86	□□□□□ -1.63
GCD1	YOR260W	RPT2	P40327	437 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms