RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C BCD1P38772 366 aa5.79□□□□□ -1.48
RAT1YOR048C DAK2P43550 591 aa5.79□□□□□ -1.48
RAT1YOR048C JJJ2P46997 583 aa5.79□□□□□ -1.48
RAT1YOR048C HPC2Q01448 625 aa5.79□□□□□ -1.48
RAT1YOR048C YMR085WP0CF18 432 aa5.79□□□□□ -1.48
RAT1YOR048C MKT1P40850 830 aaKnown RBP5.79□□□□□ -1.48
RAT1YOR048C PIP2P52960 996 aa5.79□□□□□ -1.48
RAT1YOR048C MAL13P53338 473 aa5.79□□□□□ -1.48
RAT1YOR048C DIP5P53388 608 aa5.79□□□□□ -1.48
RAT1YOR048C NAF1P53919 492 aaKnown RBP5.79□□□□□ -1.48
RAT1YOR048C MDM1Q01846 1127 aa5.79□□□□□ -1.48
RAT1YOR048C TIP41Q12199 356 aa5.79□□□□□ -1.48
RAT1YOR048C MIP1P15801 1254 aa5.78□□□□□ -1.48
RAT1YOR048C PRP9P19736 530 aaKnown RBP5.78□□□□□ -1.48
RAT1YOR048C PRP4P20053 465 aaKnown RBP5.78□□□□□ -1.48
RAT1YOR048C RET1P22276 1149 aaKnown RBP5.78□□□□□ -1.48
RAT1YOR048C GSY1P23337 708 aa5.78□□□□□ -1.48
RAT1YOR048C APL1P27351 700 aa5.78□□□□□ -1.48
RAT1YOR048C RRN6P32786 894 aa5.78□□□□□ -1.48
RAT1YOR048C MRX1P40050 688 aa5.78□□□□□ -1.48
RAT1YOR048C PGA2P53903 129 aa5.78□□□□□ -1.48
RAT1YOR048C DOS2P54858 310 aa5.78□□□□□ -1.48
RAT1YOR048C SEC5P89102 971 aa5.78□□□□□ -1.48
RAT1YOR048C YPL109CQ02981 657 aa5.78□□□□□ -1.48
RAT1YOR048C DSE3Q08729 430 aa5.78□□□□□ -1.48
RAT1YOR048C NUR1Q12066 484 aa5.78□□□□□ -1.48
RAT1YOR048C MCM3P24279 971 aaKnown RBP5.78□□□□□ -1.48
RAT1YOR048C YEL043WP32618 956 aa5.78□□□□□ -1.48
RAT1YOR048C LOS1P33418 1100 aaPredicted RBP5.78□□□□□ -1.48
RAT1YOR048C STN1P38960 494 aa5.78□□□□□ -1.48
RAT1YOR048C UBP9P39967 754 aa5.78□□□□□ -1.48
RAT1YOR048C ADA2Q02336 434 aa5.78□□□□□ -1.48
RAT1YOR048C RAD61Q99359 647 aa5.78□□□□□ -1.48
RAT1YOR048C ILV1P00927 576 aaKnown RBP5.77□□□□□ -1.49
RAT1YOR048C PYC1P11154 1178 aaKnown RBP5.77□□□□□ -1.49
RAT1YOR048C RPC53P25441 422 aa5.77□□□□□ -1.49
RAT1YOR048C PDB1P32473 366 aaKnown RBP5.77□□□□□ -1.49
RAT1YOR048C GCD6P32501 712 aaKnown RBP5.77□□□□□ -1.49
RAT1YOR048C CBF2P32504 956 aa5.77□□□□□ -1.49
RAT1YOR048C YKR018CP36114 725 aa5.77□□□□□ -1.49
RAT1YOR048C HUL5P53119 910 aa5.77□□□□□ -1.49
RAT1YOR048C AAD16Q02895 342 aa5.77□□□□□ -1.49
RAT1YOR048C CYB2P00175 591 aa5.77□□□□□ -1.49
RAT1YOR048C RPB2P08518 1224 aaKnown RBP5.77□□□□□ -1.49
RAT1YOR048C OAF3P36023 863 aa5.77□□□□□ -1.49
RAT1YOR048C NBP1P52919 319 aaPredicted RBP5.77□□□□□ -1.49
RAT1YOR048C BNI5P53890 448 aaKnown RBP5.77□□□□□ -1.49
RAT1YOR048C CEF1Q03654 590 aaPredicted RBP5.77□□□□□ -1.49
RAT1YOR048C PIG1Q06216 648 aa5.77□□□□□ -1.49
RAT1YOR048C APL5Q08951 932 aaKnown RBP5.77□□□□□ -1.49
RAT1YOR048C KRS1P15180 591 aaKnown RBP5.77□□□□□ -1.49
RAT1YOR048C CKI1P20485 582 aa5.77□□□□□ -1.49
RAT1YOR048C VTC2P43585 828 aa5.77□□□□□ -1.49
RAT1YOR048C RIM8P53179 542 aa5.77□□□□□ -1.49
RAT1YOR048C VTI1Q04338 217 aa5.77□□□□□ -1.49
RAT1YOR048C NOP6Q07623 225 aaKnown RBP5.77□□□□□ -1.49
RAT1YOR048C SSB1P11484 613 aaKnown RBP5.76□□□□□ -1.49
RAT1YOR048C SUP45P12385 437 aaKnown RBP5.76□□□□□ -1.49
RAT1YOR048C MAK11P20484 414 aaKnown RBP5.76□□□□□ -1.49
RAT1YOR048C VAN1P23642 535 aa5.76□□□□□ -1.49
RAT1YOR048C VPS35P34110 944 aa5.76□□□□□ -1.49
RAT1YOR048C SSB2P40150 613 aaKnown RBP5.76□□□□□ -1.49
RAT1YOR048C URB2P47108 1174 aa5.76□□□□□ -1.49
RAT1YOR048C TOF1P53840 1238 aa5.76□□□□□ -1.49
RAT1YOR048C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
RAT1YOR048C RAT1Q02792 1006 aaKnown RBP5.76□□□□□ -1.49
RAT1YOR048C STE23Q06010 1027 aa5.76□□□□□ -1.49
RAT1YOR048C FLO1P32768 1537 aa5.76□□□□□ -1.49
RAT1YOR048C SMY1P32364 656 aaKnown RBP5.76□□□□□ -1.49
RAT1YOR048C CDC11P32458 415 aa5.76□□□□□ -1.49
RAT1YOR048C CNS1P33313 385 aa5.76□□□□□ -1.49
RAT1YOR048C PTC3P34221 468 aaKnown RBP5.76□□□□□ -1.49
RAT1YOR048C ERC1P38767 581 aa5.76□□□□□ -1.49
RAT1YOR048C YFR006WP43590 535 aa5.76□□□□□ -1.49
RAT1YOR048C YGL039WP53183 348 aaKnown RBP5.76□□□□□ -1.49
RAT1YOR048C SYF1Q04048 859 aaPredicted RBP5.76□□□□□ -1.49
RAT1YOR048C IRC3Q06683 689 aa5.76□□□□□ -1.49
RAT1YOR048C MLH2Q07980 695 aa5.76□□□□□ -1.49
RAT1YOR048C NEW1Q08972 1196 aaKnown RBP5.76□□□□□ -1.49
RAT1YOR048C CEX1Q12453 761 aa5.76□□□□□ -1.49
RAT1YOR048C YKL050CP35736 922 aa5.75□□□□□ -1.49
RAT1YOR048C PES4P39684 611 aa5.75□□□□□ -1.49
RAT1YOR048C YTA12P40341 825 aa5.75□□□□□ -1.49
RAT1YOR048C PUS6P53294 404 aa5.75□□□□□ -1.49
RAT1YOR048C CPR6P53691 371 aaKnown RBP5.75□□□□□ -1.49
RAT1YOR048C RTC4P53850 401 aa5.75□□□□□ -1.49
RAT1YOR048C SLX4Q12098 748 aa5.75□□□□□ -1.49
RAT1YOR048C SMC6Q12749 1114 aa5.75□□□□□ -1.49
RAT1YOR048C FLO11P08640 1367 aa5.75□□□□□ -1.49
RAT1YOR048C RPL22AP05749 121 aaKnown RBP5.75□□□□□ -1.49
RAT1YOR048C FZO1P38297 855 aa5.75□□□□□ -1.49
RAT1YOR048C KAP114P53067 1004 aa5.75□□□□□ -1.49
RAT1YOR048C FOL1P53848 824 aa5.75□□□□□ -1.49
RAT1YOR048C POB3Q04636 552 aaKnown RBP5.75□□□□□ -1.49
RAT1YOR048C POL3P15436 1097 aa5.74□□□□□ -1.49
RAT1YOR048C PFK1P16861 987 aaKnown RBP5.74□□□□□ -1.49
RAT1YOR048C BAS1P22035 811 aa5.74□□□□□ -1.49
RAT1YOR048C SPP381P38282 291 aaPredicted RBP5.74□□□□□ -1.49
RAT1YOR048C SMX2P40204 77 aaKnown RBP5.74□□□□□ -1.49
RAT1YOR048C BRE2P43132 505 aa5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 63.8 ms