RNA–Protein interactions for RNA: YNL299W

TRF5, Transcript of Non-canonical poly(A) polymerase, yeast

Gene TRF5, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRF5	YNL299W	NUP85	P46673	744 aa		4.88	□□□□□ -1.63
TRF5	YNL299W	YJL181W	P46987	611 aa		4.88	□□□□□ -1.63
TRF5	YNL299W	VTC4	P47075	721 aa		4.88	□□□□□ -1.63
TRF5	YNL299W	SSL2	Q00578	843 aa		4.88	□□□□□ -1.63
TRF5	YNL299W	UBX5	Q06682	500 aa		4.88	□□□□□ -1.63
TRF5	YNL299W	FAL1	Q12099	399 aa	Known RBP	4.88	□□□□□ -1.63
TRF5	YNL299W	MET6	P05694	767 aa	Known RBP	4.87	□□□□□ -1.63
TRF5	YNL299W	BAS1	P22035	811 aa		4.87	□□□□□ -1.63
TRF5	YNL299W	AHP1	P38013	176 aa	Known RBP	4.87	□□□□□ -1.63
TRF5	YNL299W	BRE2	P43132	505 aa		4.87	□□□□□ -1.63
TRF5	YNL299W	YNR040W	P53736	256 aa		4.87	□□□□□ -1.63
TRF5	YNL299W	YOL057W	Q08225	711 aa		4.87	□□□□□ -1.63
TRF5	YNL299W	FLC1	Q08967	793 aa		4.87	□□□□□ -1.63
TRF5	YNL299W	UTP10	P42945	1769 aa	Known RBP	4.87	□□□□□ -1.63
TRF5	YNL299W	MRPL10	P36520	322 aa		4.87	□□□□□ -1.63
TRF5	YNL299W	ECM2	P38241	364 aa	Known RBP	4.87	□□□□□ -1.63
TRF5	YNL299W	RSP5	P39940	809 aa	Known RBP	4.87	□□□□□ -1.63
TRF5	YNL299W	STU2	P46675	888 aa		4.87	□□□□□ -1.63
TRF5	YNL299W	YJR098C	P47139	656 aa		4.87	□□□□□ -1.63
TRF5	YNL299W	YJR142W	P47173	342 aa		4.87	□□□□□ -1.63
TRF5	YNL299W	LSC2	P53312	427 aa		4.87	□□□□□ -1.63
TRF5	YNL299W	TIM50	Q02776	476 aa		4.87	□□□□□ -1.63
TRF5	YNL299W	MRL1	Q06815	381 aa		4.87	□□□□□ -1.63
TRF5	YNL299W	TMA46	Q12000	345 aa	Known RBP	4.87	□□□□□ -1.63
TRF5	YNL299W	LTV1	P34078	463 aa		4.86	□□□□□ -1.63
TRF5	YNL299W	TOM20	P35180	183 aa		4.86	□□□□□ -1.63
TRF5	YNL299W	YBR184W	P38299	523 aa		4.86	□□□□□ -1.63
TRF5	YNL299W	TCD1	P38756	429 aa		4.86	□□□□□ -1.63
TRF5	YNL299W	YGL140C	P53120	1219 aa		4.86	□□□□□ -1.63
TRF5	YNL299W	HXT15	P54854	567 aa		4.86	□□□□□ -1.63
TRF5	YNL299W	YDR306C	Q06640	478 aa		4.86	□□□□□ -1.63
TRF5	YNL299W	PMT7	Q06644	662 aa		4.86	□□□□□ -1.63
TRF5	YNL299W	CMR1	Q12510	522 aa	Known RBP	4.86	□□□□□ -1.63
TRF5	YNL299W	PHO8	P11491	566 aa		4.85	□□□□□ -1.63
TRF5	YNL299W	SEC23	P15303	768 aa	Known RBP	4.85	□□□□□ -1.63
TRF5	YNL299W	RGP1	P16664	663 aa		4.85	□□□□□ -1.63
TRF5	YNL299W	RAD24	P32641	659 aa		4.85	□□□□□ -1.63
TRF5	YNL299W	MFT1	P33441	392 aa	Known RBP	4.85	□□□□□ -1.63
TRF5	YNL299W	MPE1	P35728	441 aa	Known RBP	4.85	□□□□□ -1.63
TRF5	YNL299W	PEX28	P38848	579 aa		4.85	□□□□□ -1.63
TRF5	YNL299W	KRI1	P42846	591 aa	Known RBP	4.85	□□□□□ -1.63
TRF5	YNL299W	YJR008W	P47085	338 aa		4.85	□□□□□ -1.63
TRF5	YNL299W	LYS4	P49367	693 aa	Predicted RBP	4.85	□□□□□ -1.63
TRF5	YNL299W	HDA2	Q06629	674 aa		4.85	□□□□□ -1.63
TRF5	YNL299W	PEX19	Q07418	342 aa		4.85	□□□□□ -1.63
TRF5	YNL299W	SFI1	Q12369	946 aa		4.85	□□□□□ -1.63
TRF5	YNL299W	MBR1	P23493	339 aa		4.85	□□□□□ -1.63
TRF5	YNL299W	PBY1	P38254	753 aa		4.85	□□□□□ -1.63
TRF5	YNL299W	APM2	P38700	605 aa		4.85	□□□□□ -1.63
TRF5	YNL299W	CIN4	P39110	191 aa		4.85	□□□□□ -1.63
TRF5	YNL299W	SMC3	P47037	1230 aa		4.85	□□□□□ -1.63
TRF5	YNL299W	CTH1	P47976	325 aa		4.85	□□□□□ -1.63
TRF5	YNL299W	NOG1	Q02892	647 aa	Known RBP	4.85	□□□□□ -1.63
TRF5	YNL299W	SSP2	Q08646	371 aa		4.85	□□□□□ -1.63
TRF5	YNL299W	PHM7	Q12252	991 aa		4.85	□□□□□ -1.63
TRF5	YNL299W	TOP1	P04786	769 aa		4.84	□□□□□ -1.63
TRF5	YNL299W	ERR1	P0CX10	437 aa		4.84	□□□□□ -1.63
TRF5	YNL299W	ERR2	P0CX11	437 aa		4.84	□□□□□ -1.63
TRF5	YNL299W	NPR1	P22211	790 aa		4.84	□□□□□ -1.63
TRF5	YNL299W	AGP1	P25376	633 aa		4.84	□□□□□ -1.63
TRF5	YNL299W	SEA4	P38164	1038 aa		4.84	□□□□□ -1.63
TRF5	YNL299W	RSM26	P47141	266 aa		4.84	□□□□□ -1.63
TRF5	YNL299W	ZDS2	P54786	942 aa		4.84	□□□□□ -1.63
TRF5	YNL299W	YLR125W	Q12138	136 aa		4.84	□□□□□ -1.63
TRF5	YNL299W	DUR1,2	P32528	1835 aa	Known RBP	4.84	□□□□□ -1.63
TRF5	YNL299W	SWI1	P09547	1314 aa		4.84	□□□□□ -1.64
TRF5	YNL299W	TRP2	P00899	507 aa	Known RBP	4.84	□□□□□ -1.64
TRF5	YNL299W	SES1	P07284	462 aa	Known RBP	4.84	□□□□□ -1.64
TRF5	YNL299W	RPL8B	P29453	256 aa	Known RBP	4.84	□□□□□ -1.64
TRF5	YNL299W	SWC3	P31376	625 aa		4.84	□□□□□ -1.64
TRF5	YNL299W	GCD7	P32502	381 aa	Predicted RBP	4.84	□□□□□ -1.64
TRF5	YNL299W	SQT1	P35184	431 aa		4.84	□□□□□ -1.64
TRF5	YNL299W	RER2	P35196	286 aa		4.84	□□□□□ -1.64
TRF5	YNL299W	CCT5	P40413	562 aa	Known RBP	4.84	□□□□□ -1.64
TRF5	YNL299W	DNM1	P54861	757 aa		4.84	□□□□□ -1.64
TRF5	YNL299W	REC8	Q12188	680 aa		4.84	□□□□□ -1.64
TRF5	YNL299W	NYV1	Q12255	253 aa		4.84	□□□□□ -1.64
TRF5	YNL299W	SSB1	P11484	613 aa	Known RBP	4.83	□□□□□ -1.64
TRF5	YNL299W	MRP7	P12687	371 aa		4.83	□□□□□ -1.64
TRF5	YNL299W	FRS2	P15625	503 aa	Known RBP	4.83	□□□□□ -1.64
TRF5	YNL299W	ELM1	P32801	640 aa		4.83	□□□□□ -1.64
TRF5	YNL299W	RDH54	P38086	958 aa		4.83	□□□□□ -1.64
TRF5	YNL299W	NPR3	P38742	1146 aa		4.83	□□□□□ -1.64
TRF5	YNL299W	SSB2	P40150	613 aa	Known RBP	4.83	□□□□□ -1.64
TRF5	YNL299W	CEP3	P40969	608 aa		4.83	□□□□□ -1.64
TRF5	YNL299W	PFD1	P46988	109 aa		4.83	□□□□□ -1.64
TRF5	YNL299W	YGR125W	P53273	1036 aa		4.83	□□□□□ -1.64
TRF5	YNL299W	FMP25	Q08023	583 aa		4.83	□□□□□ -1.64
TRF5	YNL299W	YGR161W-C	Q3E744	92 aa		4.83	□□□□□ -1.64
TRF5	YNL299W	NOP14	Q99207	810 aa	Known RBP	4.83	□□□□□ -1.64
TRF5	YNL299W	CAN1	P04817	590 aa		4.82	□□□□□ -1.64
TRF5	YNL299W	RPL19A	P0CX82	189 aa	Known RBP	4.82	□□□□□ -1.64
TRF5	YNL299W	RPL19B	P0CX83	189 aa	Predicted RBP	4.82	□□□□□ -1.64
TRF5	YNL299W	MSH3	P25336	1018 aa		4.82	□□□□□ -1.64
TRF5	YNL299W	RAD27	P26793	382 aa		4.82	□□□□□ -1.64
TRF5	YNL299W	ABD1	P32783	436 aa	Predicted RBP	4.82	□□□□□ -1.64
TRF5	YNL299W	VBA5	P36172	582 aa		4.82	□□□□□ -1.64
TRF5	YNL299W	UBP12	P39538	1254 aa		4.82	□□□□□ -1.64
TRF5	YNL299W	YER156C	P40093	338 aa	Known RBP	4.82	□□□□□ -1.64
TRF5	YNL299W	SIW14	P53965	281 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms