RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB2	YNL209W	FYV8	P46949	817 aa	Known RBP	5.11	□□□□□ -1.59
SSB2	YNL209W	APT1	P49435	187 aa	Known RBP	5.11	□□□□□ -1.59
SSB2	YNL209W	SQS1	P53866	767 aa	Known RBP	5.11	□□□□□ -1.59
SSB2	YNL209W	MEH1	Q02205	184 aa		5.11	□□□□□ -1.59
SSB2	YNL209W	UME1	Q03010	460 aa		5.11	□□□□□ -1.59
SSB2	YNL209W	COG4	Q06096	861 aa		5.11	□□□□□ -1.59
SSB2	YNL209W	YAP7	Q08182	245 aa		5.11	□□□□□ -1.59
SSB2	YNL209W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.11	□□□□□ -1.59	not detected
SSB2	YNL209W	TY4B-P	A0A0B7P3V8	1104 aa		5.1	□□□□□ -1.59
SSB2	YNL209W	MIP1	P15801	1254 aa		5.1	□□□□□ -1.59
SSB2	YNL209W	SPO12	P17123	173 aa		5.1	□□□□□ -1.59
SSB2	YNL209W	CLN1	P20437	546 aa		5.1	□□□□□ -1.59
SSB2	YNL209W	ISY1	P21374	235 aa	Predicted RBP	5.1	□□□□□ -1.59
SSB2	YNL209W	PHO87	P25360	923 aa		5.1	□□□□□ -1.59
SSB2	YNL209W	PPS1	P38148	807 aa		5.1	□□□□□ -1.59
SSB2	YNL209W	PIH1	P38768	344 aa		5.1	□□□□□ -1.59
SSB2	YNL209W	GAA1	P39012	614 aa		5.1	□□□□□ -1.59
SSB2	YNL209W	CEP3	P40969	608 aa		5.1	□□□□□ -1.59
SSB2	YNL209W	THI6	P41835	540 aa		5.1	□□□□□ -1.59
SSB2	YNL209W	HFM1	P51979	1187 aa		5.1	□□□□□ -1.59
SSB2	YNL209W	CAF130	P53280	1122 aa	Predicted RBP	5.1	□□□□□ -1.59
SSB2	YNL209W	AAD16	Q02895	342 aa		5.1	□□□□□ -1.59
SSB2	YNL209W	CRF1	Q04930	467 aa		5.1	□□□□□ -1.59
SSB2	YNL209W	YLR287C	Q05881	355 aa		5.1	□□□□□ -1.59
SSB2	YNL209W	VPS38	Q05919	439 aa		5.1	□□□□□ -1.59
SSB2	YNL209W	SPO75	Q07798	868 aa		5.1	□□□□□ -1.59
SSB2	YNL209W	MCM16	Q12262	181 aa		5.1	□□□□□ -1.59
SSB2	YNL209W	SMC6	Q12749	1114 aa		5.1	□□□□□ -1.59
SSB2	YNL209W	CBP1	P07252	654 aa		5.09	□□□□□ -1.59
SSB2	YNL209W	OM45	P16547	393 aa		5.09	□□□□□ -1.59
SSB2	YNL209W	SPO11	P23179	398 aa		5.09	□□□□□ -1.59
SSB2	YNL209W	CAJ1	P39101	391 aa		5.09	□□□□□ -1.59
SSB2	YNL209W	ECM1	P39715	212 aa		5.09	□□□□□ -1.59
SSB2	YNL209W	ULP2	P40537	1034 aa	Predicted RBP	5.09	□□□□□ -1.59
SSB2	YNL209W	TOS3	P43637	560 aa		5.09	□□□□□ -1.59
SSB2	YNL209W	FMS1	P50264	508 aa		5.09	□□□□□ -1.59
SSB2	YNL209W	GUP1	P53154	560 aa		5.09	□□□□□ -1.59
SSB2	YNL209W	LSB1	P53281	241 aa		5.09	□□□□□ -1.59
SSB2	YNL209W	PGA2	P53903	129 aa		5.09	□□□□□ -1.59
SSB2	YNL209W	RRB1	Q04225	511 aa	Known RBP	5.09	□□□□□ -1.59
SSB2	YNL209W	ATG20	Q07528	640 aa		5.09	□□□□□ -1.59
SSB2	YNL209W	HMI1	Q12039	706 aa		5.09	□□□□□ -1.59
SSB2	YNL209W	YVC1	Q12324	675 aa		5.09	□□□□□ -1.59
SSB2	YNL209W	UBC1	P21734	215 aa	Known RBP	5.09	□□□□□ -1.6
SSB2	YNL209W	PWP2	P25635	923 aa	Known RBP	5.09	□□□□□ -1.6
SSB2	YNL209W	PAN5	P38787	379 aa		5.09	□□□□□ -1.6
SSB2	YNL209W	FET4	P40988	552 aa		5.09	□□□□□ -1.6
SSB2	YNL209W	EMP47	P43555	445 aa		5.09	□□□□□ -1.6
SSB2	YNL209W	ERG5	P54781	538 aa		5.09	□□□□□ -1.6
SSB2	YNL209W	VPS60	Q03390	229 aa		5.09	□□□□□ -1.6
SSB2	YNL209W	YLR001C	Q07895	862 aa		5.09	□□□□□ -1.6
SSB2	YNL209W	FOB1	O13329	566 aa		5.08	□□□□□ -1.6
SSB2	YNL209W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
SSB2	YNL209W	MTF2	P10849	440 aa		5.08	□□□□□ -1.6
SSB2	YNL209W	RPL5	P26321	297 aa	Known RBP	5.08	□□□□□ -1.6
SSB2	YNL209W	SLI15	P38283	698 aa		5.08	□□□□□ -1.6
SSB2	YNL209W	REI1	P38344	393 aa	Predicted RBP	5.08	□□□□□ -1.6
SSB2	YNL209W	LAM1	P38851	1228 aa		5.08	□□□□□ -1.6
SSB2	YNL209W	YMR124W	P39523	943 aa	Known RBP	5.08	□□□□□ -1.6
SSB2	YNL209W	BIM1	P40013	344 aa		5.08	□□□□□ -1.6
SSB2	YNL209W	VFA1	P40080	203 aa		5.08	□□□□□ -1.6
SSB2	YNL209W	SHQ1	P40486	507 aa	Predicted RBP	5.08	□□□□□ -1.6
SSB2	YNL209W	IES1	P43579	692 aa		5.08	□□□□□ -1.6
SSB2	YNL209W	DIP5	P53388	608 aa		5.08	□□□□□ -1.6
SSB2	YNL209W	BUL2	Q03758	920 aa	Known RBP	5.08	□□□□□ -1.6
SSB2	YNL209W	HEL2	Q05580	639 aa	Known RBP	5.08	□□□□□ -1.6
SSB2	YNL209W	YLR257W	Q06146	321 aa	Known RBP	5.08	□□□□□ -1.6
SSB2	YNL209W	YDL057W	Q07379	328 aa		5.08	□□□□□ -1.6
SSB2	YNL209W	AIM7	Q12156	149 aa		5.08	□□□□□ -1.6
SSB2	YNL209W	RKM4	Q12504	494 aa		5.08	□□□□□ -1.6
SSB2	YNL209W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
SSB2	YNL209W	GAL11	P19659	1081 aa		5.07	□□□□□ -1.6
SSB2	YNL209W	DAL7	P21826	554 aa		5.07	□□□□□ -1.6
SSB2	YNL209W	PDC6	P26263	563 aa	Known RBP	5.07	□□□□□ -1.6
SSB2	YNL209W	XRS2	P33301	854 aa		5.07	□□□□□ -1.6
SSB2	YNL209W	SIP3	P38717	1229 aa		5.07	□□□□□ -1.6
SSB2	YNL209W	CCC2	P38995	1004 aa		5.07	□□□□□ -1.6
SSB2	YNL209W	TIF4631	P39935	952 aa	Known RBP	5.07	□□□□□ -1.6
SSB2	YNL209W	VHR2	P40041	505 aa		5.07	□□□□□ -1.6
SSB2	YNL209W	NDC80	P40460	691 aa		5.07	□□□□□ -1.6
SSB2	YNL209W	SEC27	P41811	889 aa	Known RBP	5.07	□□□□□ -1.6
SSB2	YNL209W	BRE2	P43132	505 aa		5.07	□□□□□ -1.6
SSB2	YNL209W	CTR1	P49573	406 aa		5.07	□□□□□ -1.6
SSB2	YNL209W	YML020W	Q03722	664 aa		5.07	□□□□□ -1.6
SSB2	YNL209W	YOR389W	Q08912	624 aa		5.07	□□□□□ -1.6
SSB2	YNL209W	ARP6	Q12509	438 aa		5.07	□□□□□ -1.6
SSB2	YNL209W	TOM70	P07213	617 aa	Known RBP	5.07	□□□□□ -1.6
SSB2	YNL209W	PPR1	P07272	904 aa	Predicted RBP	5.07	□□□□□ -1.6
SSB2	YNL209W	SUP45	P12385	437 aa	Known RBP	5.07	□□□□□ -1.6
SSB2	YNL209W	PFK1	P16861	987 aa	Known RBP	5.07	□□□□□ -1.6
SSB2	YNL209W	SRO9	P25567	434 aa	Known RBP	5.07	□□□□□ -1.6
SSB2	YNL209W	TRK2	P28584	889 aa		5.07	□□□□□ -1.6
SSB2	YNL209W	EFM2	P38347	419 aa		5.07	□□□□□ -1.6
SSB2	YNL209W	NMD3	P38861	518 aa	Known RBP	5.07	□□□□□ -1.6
SSB2	YNL209W	UBP5	P39944	805 aa		5.07	□□□□□ -1.6
SSB2	YNL209W	ACA1	P39970	489 aa		5.07	□□□□□ -1.6
SSB2	YNL209W	NIT1	P40447	199 aa		5.07	□□□□□ -1.6
SSB2	YNL209W	NBP1	P52919	319 aa	Predicted RBP	5.07	□□□□□ -1.6
SSB2	YNL209W	TAD1	P53065	400 aa		5.07	□□□□□ -1.6
SSB2	YNL209W	YGR117C	P53270	476 aa		5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms