RNA–Protein interactions for RNA: YNL186W

UBP10, Transcript of Ubiquitin-specific protease, deubiquitinates Ub-protein moieties, yeast

Gene UBP10, Length 2,379 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP10	YNL186W	SQT1	P35184	431 aa		4.92	□□□□□ -1.62
UBP10	YNL186W	MNN4	P36044	1178 aa		4.92	□□□□□ -1.62
UBP10	YNL186W	RIM11	P38615	370 aa		4.92	□□□□□ -1.62
UBP10	YNL186W	AIM46	P38885	310 aa		4.92	□□□□□ -1.62
UBP10	YNL186W	MTQ2	Q03920	221 aa	Predicted RBP	4.92	□□□□□ -1.62
UBP10	YNL186W	YDL129W	Q07555	291 aa		4.92	□□□□□ -1.62
UBP10	YNL186W	KAP122	P32767	1081 aa		4.92	□□□□□ -1.62
UBP10	YNL186W	MRT4	P33201	236 aa	Known RBP	4.92	□□□□□ -1.62
UBP10	YNL186W	MDM1	Q01846	1127 aa		4.92	□□□□□ -1.62
UBP10	YNL186W	TRE2	Q08693	809 aa		4.92	□□□□□ -1.62
UBP10	YNL186W	INO1	P11986	533 aa		4.91	□□□□□ -1.62
UBP10	YNL186W	APA1	P16550	321 aa	Known RBP	4.91	□□□□□ -1.62
UBP10	YNL186W	SHM1	P37292	490 aa	Predicted RBP	4.91	□□□□□ -1.62
UBP10	YNL186W	XDJ1	P39102	459 aa		4.91	□□□□□ -1.62
UBP10	YNL186W	ROD1	Q02805	837 aa		4.91	□□□□□ -1.62
UBP10	YNL186W	SYH1	Q02875	849 aa	Known RBP	4.91	□□□□□ -1.62
UBP10	YNL186W	TIF35	Q04067	274 aa	Known RBP	4.91	□□□□□ -1.62
UBP10	YNL186W	PMT7	Q06644	662 aa		4.91	□□□□□ -1.62
UBP10	YNL186W	MSH3	P25336	1018 aa		4.91	□□□□□ -1.62
UBP10	YNL186W	VBA3	P25594	458 aa		4.91	□□□□□ -1.62
UBP10	YNL186W	PEX13	P80667	386 aa		4.91	□□□□□ -1.62
UBP10	YNL186W	HSC82	P15108	705 aa	Known RBP	4.9	□□□□□ -1.62
UBP10	YNL186W	PRP5	P21372	849 aa	Predicted RBP	4.9	□□□□□ -1.62
UBP10	YNL186W	PAN5	P38787	379 aa		4.9	□□□□□ -1.62
UBP10	YNL186W	DSS1	P39112	969 aa		4.9	□□□□□ -1.62
UBP10	YNL186W	ENT3	P47160	408 aa		4.9	□□□□□ -1.62
UBP10	YNL186W	IMH1	Q06704	911 aa	Known RBP	4.9	□□□□□ -1.62
UBP10	YNL186W	ROM2	P51862	1356 aa	Known RBP	4.9	□□□□□ -1.63
UBP10	YNL186W	ECM2	P38241	364 aa	Known RBP	4.9	□□□□□ -1.63
UBP10	YNL186W	SSN3	P39073	555 aa		4.9	□□□□□ -1.63
UBP10	YNL186W	RSC8	P43609	557 aa	Known RBP	4.9	□□□□□ -1.63
UBP10	YNL186W	HFD1	Q04458	532 aa		4.9	□□□□□ -1.63
UBP10	YNL186W	RRP6	Q12149	733 aa	Known RBP	4.9	□□□□□ -1.63
UBP10	YNL186W	SNU66	Q12420	587 aa	Predicted RBP	4.9	□□□□□ -1.63
UBP10	YNL186W	RPP2B	P02400	110 aa	Known RBP	4.89	□□□□□ -1.63
UBP10	YNL186W	YAP1801	P38856	637 aa		4.89	□□□□□ -1.63
UBP10	YNL186W	YIL165C	P40446	119 aa		4.89	□□□□□ -1.63
UBP10	YNL186W	MET13	P53128	600 aa		4.89	□□□□□ -1.63
UBP10	YNL186W	RRP5	Q05022	1729 aa	Known RBP	4.89	□□□□□ -1.63
UBP10	YNL186W	PCL2	P25693	308 aa		4.89	□□□□□ -1.63
UBP10	YNL186W	SSH4	P32343	579 aa		4.89	□□□□□ -1.63
UBP10	YNL186W	MRS6	P32864	603 aa	Known RBP	4.89	□□□□□ -1.63
UBP10	YNL186W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
UBP10	YNL186W	MAL31	P38156	614 aa		4.89	□□□□□ -1.63
UBP10	YNL186W	UBP6	P43593	499 aa	Known RBP	4.89	□□□□□ -1.63
UBP10	YNL186W	HIF1	Q12373	385 aa		4.89	□□□□□ -1.63
UBP10	YNL186W	LDB19	Q12502	818 aa		4.89	□□□□□ -1.63
UBP10	YNL186W	TOM70	P07213	617 aa	Known RBP	4.88	□□□□□ -1.63
UBP10	YNL186W	PTP2	P29461	750 aa		4.88	□□□□□ -1.63
UBP10	YNL186W	YGL176C	P46945	554 aa		4.88	□□□□□ -1.63
UBP10	YNL186W	JJJ2	P46997	583 aa		4.88	□□□□□ -1.63
UBP10	YNL186W	YML131W	Q03102	365 aa		4.88	□□□□□ -1.63
UBP10	YNL186W	RKM4	Q12504	494 aa		4.88	□□□□□ -1.63
UBP10	YNL186W	YOL087C	Q99247	1116 aa		4.88	□□□□□ -1.63
UBP10	YNL186W	CDC9	P04819	755 aa		4.87	□□□□□ -1.63
UBP10	YNL186W	SRD1	P09007	221 aa		4.87	□□□□□ -1.63
UBP10	YNL186W	YBR284W	P38150	797 aa		4.87	□□□□□ -1.63
UBP10	YNL186W	YBR287W	P38355	427 aa		4.87	□□□□□ -1.63
UBP10	YNL186W	PTC2	P39966	464 aa	Known RBP	4.87	□□□□□ -1.63
UBP10	YNL186W	PBP1	P53297	722 aa	Known RBP	4.87	□□□□□ -1.63
UBP10	YNL186W	RTP1	Q12751	981 aa		4.87	□□□□□ -1.63
UBP10	YNL186W	NUP192	P47054	1683 aa		4.87	□□□□□ -1.63
UBP10	YNL186W	FOB1	O13329	566 aa		4.87	□□□□□ -1.63
UBP10	YNL186W	MSD1	P15179	658 aa	Known RBP	4.87	□□□□□ -1.63
UBP10	YNL186W	NIC96	P34077	839 aa		4.87	□□□□□ -1.63
UBP10	YNL186W	YHL041W	P38730	149 aa		4.87	□□□□□ -1.63
UBP10	YNL186W	DLD3	P39976	496 aa	Known RBP	4.87	□□□□□ -1.63
UBP10	YNL186W	NIT2	P47016	307 aa		4.87	□□□□□ -1.63
UBP10	YNL186W	SPP1	Q03012	353 aa		4.87	□□□□□ -1.63
UBP10	YNL186W	YML082W	Q04533	649 aa	Known RBP	4.87	□□□□□ -1.63
UBP10	YNL186W	DBF20	P32328	564 aa		4.86	□□□□□ -1.63
UBP10	YNL186W	YKL107W	P34251	309 aa		4.86	□□□□□ -1.63
UBP10	YNL186W	EXO5	P38289	585 aa		4.86	□□□□□ -1.63
UBP10	YNL186W	SIP5	P40210	489 aa	Known RBP	4.86	□□□□□ -1.63
UBP10	YNL186W	YJR096W	P47137	282 aa		4.86	□□□□□ -1.63
UBP10	YNL186W	LCB5	Q06147	687 aa	Known RBP	4.86	□□□□□ -1.63
UBP10	YNL186W	AOS1	Q06624	347 aa		4.86	□□□□□ -1.63
UBP10	YNL186W	YLL066C	Q99208	1374 aa		4.86	□□□□□ -1.63
UBP10	YNL186W	RAD53	P22216	821 aa		4.86	□□□□□ -1.63
UBP10	YNL186W	SPT23	P35210	1082 aa		4.86	□□□□□ -1.63
UBP10	YNL186W	KTR4	P38131	464 aa		4.86	□□□□□ -1.63
UBP10	YNL186W	ALA1	P40825	983 aa	Known RBP	4.86	□□□□□ -1.63
UBP10	YNL186W	DUG1	P43616	481 aa	Known RBP	4.86	□□□□□ -1.63
UBP10	YNL186W	RAT1	Q02792	1006 aa	Known RBP	4.86	□□□□□ -1.63
UBP10	YNL186W	SCT1	P32784	759 aa		4.85	□□□□□ -1.63
UBP10	YNL186W	SKP1	P52286	194 aa		4.85	□□□□□ -1.63
UBP10	YNL186W	SNP1	Q00916	300 aa	Predicted RBP	4.85	□□□□□ -1.63
UBP10	YNL186W	CUS1	Q02554	436 aa	Predicted RBP	4.85	□□□□□ -1.63
UBP10	YNL186W	MLC2	Q06580	163 aa		4.85	□□□□□ -1.63
UBP10	YNL186W	PSR2	Q07949	397 aa		4.85	□□□□□ -1.63
UBP10	YNL186W	SFL1	P20134	766 aa		4.85	□□□□□ -1.63
UBP10	YNL186W	GSY1	P23337	708 aa		4.85	□□□□□ -1.63
UBP10	YNL186W	SYP1	P25623	870 aa	Known RBP	4.85	□□□□□ -1.63
UBP10	YNL186W	PTH2	P34222	208 aa		4.85	□□□□□ -1.63
UBP10	YNL186W	PET10	P36139	283 aa		4.85	□□□□□ -1.63
UBP10	YNL186W	GPP2	P40106	250 aa	Known RBP	4.85	□□□□□ -1.63
UBP10	YNL186W	NCR1	Q12200	1170 aa		4.85	□□□□□ -1.63
UBP10	YNL186W	TY1A-DR3	Q12441	440 aa		4.85	□□□□□ -1.63
UBP10	YNL186W	RAD18	P10862	487 aa		4.84	□□□□□ -1.63
UBP10	YNL186W	KCC4	P25389	1037 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 75.5 ms