RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeastyeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEN1YLR430W SRL4Q03085 281 aa4.49□□□□□ -1.69
SEN1YLR430W RRN11Q04712 507 aa4.49□□□□□ -1.69
SEN1YLR430W DYN3Q04949 312 aa4.49□□□□□ -1.69
SEN1YLR430W DCS2Q12123 353 aa4.49□□□□□ -1.69
SEN1YLR430W YLR125WQ12138 136 aa4.49□□□□□ -1.69
SEN1YLR430W BBP1Q12365 385 aa4.49□□□□□ -1.69
SEN1YLR430W LPD1P09624 499 aaKnown RBP4.49□□□□□ -1.69
SEN1YLR430W RSR1P13856 272 aa4.49□□□□□ -1.69
SEN1YLR430W RPB4P20433 221 aaPredicted RBP4.49□□□□□ -1.69
SEN1YLR430W UBP12P39538 1254 aa4.49□□□□□ -1.69
SEN1YLR430W SIP5P40210 489 aaKnown RBP4.49□□□□□ -1.69
SEN1YLR430W ALB1P47019 175 aaPredicted RBP4.49□□□□□ -1.69
SEN1YLR430W MSH6Q03834 1242 aa4.49□□□□□ -1.69
SEN1YLR430W YDL073WQ07454 984 aa4.49□□□□□ -1.69
SEN1YLR430W BUG1Q12191 341 aa4.49□□□□□ -1.69
SEN1YLR430W AXL1P40851 1208 aa4.48□□□□□ -1.69
SEN1YLR430W TAP42Q04372 366 aa4.48□□□□□ -1.69
SEN1YLR430W VHS3Q08438 674 aa4.48□□□□□ -1.69
SEN1YLR430W NOB1Q08444 459 aaKnown RBP4.48□□□□□ -1.69
SEN1YLR430W APC5Q08683 685 aa4.48□□□□□ -1.69
SEN1YLR430W YIG1Q08956 461 aa4.48□□□□□ -1.69
SEN1YLR430W LEU1P07264 779 aaKnown RBP4.48□□□□□ -1.69
SEN1YLR430W SET1P38827 1080 aaKnown RBP4.48□□□□□ -1.69
SEN1YLR430W FYV6P53913 173 aa4.48□□□□□ -1.69
SEN1YLR430W CDC25P04821 1589 aa4.48□□□□□ -1.69
SEN1YLR430W ULS1Q08562 1619 aa4.48□□□□□ -1.69
SEN1YLR430W HIS3P06633 220 aa4.48□□□□□ -1.69
SEN1YLR430W SEC2P17065 759 aa4.48□□□□□ -1.69
SEN1YLR430W RFT1P38206 574 aaPredicted RBP4.48□□□□□ -1.69
SEN1YLR430W YGR266WP53326 701 aa4.48□□□□□ -1.69
SEN1YLR430W YML020WQ03722 664 aa4.48□□□□□ -1.69
SEN1YLR430W GFD1Q04839 188 aaKnown RBP4.48□□□□□ -1.69
SEN1YLR430W PWP1P21304 576 aaKnown RBP4.48□□□□□ -1.69
SEN1YLR430W YCR051WP25631 222 aa4.48□□□□□ -1.69
SEN1YLR430W SLA2P33338 968 aa4.48□□□□□ -1.69
SEN1YLR430W MAL33P38157 468 aa4.48□□□□□ -1.69
SEN1YLR430W SNX4P47057 423 aa4.48□□□□□ -1.69
SEN1YLR430W HSP42Q12329 375 aa4.48□□□□□ -1.69
SEN1YLR430W TSR4P25040 408 aa4.48□□□□□ -1.69
SEN1YLR430W SMI1P32566 505 aa4.48□□□□□ -1.69
SEN1YLR430W SPP381P38282 291 aaPredicted RBP4.48□□□□□ -1.69
SEN1YLR430W FYV10P40492 516 aa4.48□□□□□ -1.69
SEN1YLR430W TPO2P53283 614 aa4.48□□□□□ -1.69
SEN1YLR430W IPI3P53877 555 aa4.48□□□□□ -1.69
SEN1YLR430W RIX7Q07844 837 aaKnown RBP4.48□□□□□ -1.69
SEN1YLR430W GET4Q12125 312 aa4.48□□□□□ -1.69
SEN1YLR430W RPS19AP07280 144 aaKnown RBP4.48□□□□□ -1.69
SEN1YLR430W RPS19BP07281 144 aaPredicted RBP4.48□□□□□ -1.69
SEN1YLR430W OSM1P21375 501 aaKnown RBP4.48□□□□□ -1.69
SEN1YLR430W PUF4P25339 888 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
SEN1YLR430W NIP1P32497 812 aaKnown RBP4.48□□□□□ -1.69
SEN1YLR430W GCD7P32502 381 aaPredicted RBP4.48□□□□□ -1.69
SEN1YLR430W AFG2P32794 780 aa4.48□□□□□ -1.69
SEN1YLR430W BUD2P33314 1104 aa4.48□□□□□ -1.69
SEN1YLR430W IFA38P38286 347 aa4.48□□□□□ -1.69
SEN1YLR430W VMA22P38784 181 aa4.48□□□□□ -1.69
SEN1YLR430W FTR1P40088 404 aa4.48□□□□□ -1.69
SEN1YLR430W UBP6P43593 499 aaKnown RBP4.48□□□□□ -1.69
SEN1YLR430W UIP4Q08926 304 aa4.48□□□□□ -1.69
SEN1YLR430W PDR12Q02785 1511 aa4.47□□□□□ -1.69
SEN1YLR430W RPL6BP05739 176 aaKnown RBP4.47□□□□□ -1.69
SEN1YLR430W MTF2P10849 440 aa4.47□□□□□ -1.69
SEN1YLR430W MSS116P15424 664 aaKnown RBP4.47□□□□□ -1.69
SEN1YLR430W SCJ1P25303 377 aa4.47□□□□□ -1.69
SEN1YLR430W PTC4P38089 393 aa4.47□□□□□ -1.69
SEN1YLR430W RTS1P38903 757 aa4.47□□□□□ -1.69
SEN1YLR430W ALG2P43636 503 aa4.47□□□□□ -1.69
SEN1YLR430W DCP2P53550 970 aaKnown RBP4.47□□□□□ -1.69
SEN1YLR430W AVO1Q08236 1176 aa4.47□□□□□ -1.69
SEN1YLR430W RKM4Q12504 494 aa4.47□□□□□ -1.69
SEN1YLR430W CKI1P20485 582 aa4.47□□□□□ -1.69
SEN1YLR430W CNA1P23287 553 aa4.47□□□□□ -1.69
SEN1YLR430W MSH2P25847 964 aa4.47□□□□□ -1.69
SEN1YLR430W VMA8P32610 256 aaKnown RBP4.47□□□□□ -1.69
SEN1YLR430W YKL063CP35725 167 aa4.47□□□□□ -1.69
SEN1YLR430W PCF11P39081 626 aaPredicted RBP4.47□□□□□ -1.69
SEN1YLR430W SNL1P40548 159 aa4.47□□□□□ -1.69
SEN1YLR430W GCV2P49095 1034 aa4.47□□□□□ -1.69
SEN1YLR430W ESBP6P53918 673 aa4.47□□□□□ -1.69
SEN1YLR430W RPM2Q02773 1202 aa4.47□□□□□ -1.69
SEN1YLR430W SVF1Q05515 481 aa4.47□□□□□ -1.69
SEN1YLR430W HSP30P25619 332 aa4.47□□□□□ -1.69
SEN1YLR430W CCC2P38995 1004 aa4.47□□□□□ -1.69
SEN1YLR430W PDS1P40316 373 aaPredicted RBP4.47□□□□□ -1.69
SEN1YLR430W GCD10P41814 478 aa4.47□□□□□ -1.69
SEN1YLR430W YJR054WP47114 497 aa4.47□□□□□ -1.69
SEN1YLR430W TFB3Q03290 321 aa4.47□□□□□ -1.69
SEN1YLR430W CSI1Q04368 295 aa4.47□□□□□ -1.69
SEN1YLR430W MCP2Q06567 569 aa4.47□□□□□ -1.69
SEN1YLR430W TMA16Q08687 178 aa4.47□□□□□ -1.69
SEN1YLR430W MPT5P39016 859 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
SEN1YLR430W MKT1P40850 830 aaKnown RBP4.47□□□□□ -1.69
SEN1YLR430W DIP5P53388 608 aa4.47□□□□□ -1.69
SEN1YLR430W TMA20P89886 181 aaPredicted RBP4.47□□□□□ -1.69
SEN1YLR430W PTA1Q01329 785 aaPredicted RBP4.47□□□□□ -1.69
SEN1YLR430W UTP5Q04177 643 aaKnown RBP4.47□□□□□ -1.69
SEN1YLR430W CEX1Q12453 761 aa4.47□□□□□ -1.69
SEN1YLR430W REC107P21651 314 aa4.47□□□□□ -1.69
SEN1YLR430W UBC6P33296 250 aaPredicted RBP4.47□□□□□ -1.69
SEN1YLR430W SMF1P38925 575 aa4.47□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms