RNA–Protein interactions for RNA: YKR009C

FOX2, Transcript of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase, yeast

Gene FOX2, Length 2,703 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FOX2	YKR009C	RPN10	P38886	268 aa	Known RBP	4.84	□□□□□ -1.63
FOX2	YKR009C	CIT3	P43635	486 aa		4.84	□□□□□ -1.63
FOX2	YKR009C	JJJ3	P47138	172 aa		4.84	□□□□□ -1.63
FOX2	YKR009C	RSM7	P47150	247 aa		4.84	□□□□□ -1.63
FOX2	YKR009C	MET13	P53128	600 aa		4.84	□□□□□ -1.63
FOX2	YKR009C	FAR11	P53917	953 aa		4.84	□□□□□ -1.63
FOX2	YKR009C	COQ9	Q05779	260 aa		4.84	□□□□□ -1.63
FOX2	YKR009C	MMR1	Q06324	491 aa		4.84	□□□□□ -1.63
FOX2	YKR009C	CRD1	Q07560	283 aa		4.84	□□□□□ -1.63
FOX2	YKR009C	ADE2	P21264	571 aa	Known RBP	4.84	□□□□□ -1.63
FOX2	YKR009C	VID28	P40547	921 aa		4.84	□□□□□ -1.63
FOX2	YKR009C	HFI1	Q12060	488 aa		4.84	□□□□□ -1.63
FOX2	YKR009C	SYN8	P31377	255 aa		4.83	□□□□□ -1.64
FOX2	YKR009C	SAF1	P38352	637 aa		4.83	□□□□□ -1.64
FOX2	YKR009C	BUD16	P39988	312 aa		4.83	□□□□□ -1.64
FOX2	YKR009C	INP51	P40559	946 aa	Known RBP	4.83	□□□□□ -1.64
FOX2	YKR009C	YJL045W	P47052	634 aa		4.83	□□□□□ -1.64
FOX2	YKR009C	DSE4	P53753	1117 aa		4.83	□□□□□ -1.64
FOX2	YKR009C	PSK2	Q08217	1101 aa		4.83	□□□□□ -1.64
FOX2	YKR009C	DED1	P06634	604 aa	Known RBP	4.83	□□□□□ -1.64
FOX2	YKR009C	SPT2	P06843	333 aa	Predicted RBP	4.83	□□□□□ -1.64
FOX2	YKR009C	CDC6	P09119	513 aa		4.83	□□□□□ -1.64
FOX2	YKR009C	THR4	P16120	514 aa	Known RBP	4.83	□□□□□ -1.64
FOX2	YKR009C	EPL1	P43572	832 aa		4.83	□□□□□ -1.64
FOX2	YKR009C	YGR273C	P53329	174 aa		4.83	□□□□□ -1.64
FOX2	YKR009C	MUK1	Q02866	612 aa		4.83	□□□□□ -1.64
FOX2	YKR009C	CSM3	Q04659	317 aa		4.83	□□□□□ -1.64
FOX2	YKR009C	GPI13	Q07830	1017 aa		4.83	□□□□□ -1.64
FOX2	YKR009C	TCP1	P12612	559 aa	Known RBP	4.82	□□□□□ -1.64
FOX2	YKR009C	CLN3	P13365	580 aa		4.82	□□□□□ -1.64
FOX2	YKR009C	URK1	P27515	501 aa		4.82	□□□□□ -1.64
FOX2	YKR009C	STT3	P39007	718 aa	Known RBP	4.82	□□□□□ -1.64
FOX2	YKR009C	YGR153W	P48238	217 aa		4.82	□□□□□ -1.64
FOX2	YKR009C	INP52	P50942	1183 aa		4.82	□□□□□ -1.64
FOX2	YKR009C	EMI2	Q04409	500 aa	Known RBP	4.82	□□□□□ -1.64
FOX2	YKR009C	AIM33	Q04516	312 aa		4.82	□□□□□ -1.64
FOX2	YKR009C	YLR455W	Q06188	304 aa		4.82	□□□□□ -1.64
FOX2	YKR009C	HIF1	Q12373	385 aa		4.82	□□□□□ -1.64
FOX2	YKR009C	VPS1	P21576	704 aa	Known RBP	4.82	□□□□□ -1.64
FOX2	YKR009C	DPH2	P32461	534 aa		4.82	□□□□□ -1.64
FOX2	YKR009C	UBX7	P38349	436 aa		4.82	□□□□□ -1.64
FOX2	YKR009C	FMP10	P40098	244 aa		4.82	□□□□□ -1.64
FOX2	YKR009C	GIS4	Q04233	774 aa		4.82	□□□□□ -1.64
FOX2	YKR009C	YPL150W	Q12152	901 aa		4.82	□□□□□ -1.64
FOX2	YKR009C	TIP41	Q12199	356 aa		4.82	□□□□□ -1.64
FOX2	YKR009C	ILV1	P00927	576 aa	Known RBP	4.81	□□□□□ -1.64
FOX2	YKR009C	SRD1	P09007	221 aa		4.81	□□□□□ -1.64
FOX2	YKR009C	ALG1	P16661	449 aa		4.81	□□□□□ -1.64
FOX2	YKR009C	TMT1	P32643	299 aa		4.81	□□□□□ -1.64
FOX2	YKR009C	OYE3	P41816	400 aa	Predicted RBP	4.81	□□□□□ -1.64
FOX2	YKR009C	HEH2	Q03281	663 aa		4.81	□□□□□ -1.64
FOX2	YKR009C	SMD2	Q06217	110 aa	Known RBP	4.81	□□□□□ -1.64
FOX2	YKR009C	MAG2	Q06436	670 aa	Known RBP	4.81	□□□□□ -1.64
FOX2	YKR009C	SLK19	Q08581	821 aa	Known RBP	4.81	□□□□□ -1.64
FOX2	YKR009C	PCD1	Q12524	340 aa		4.81	□□□□□ -1.64
FOX2	YKR009C	RNR2	P09938	399 aa	Known RBP	4.81	□□□□□ -1.64
FOX2	YKR009C	CKA2	P19454	339 aa		4.81	□□□□□ -1.64
FOX2	YKR009C	HCA4	P20448	770 aa	Known RBP	4.81	□□□□□ -1.64
FOX2	YKR009C	MCM3	P24279	971 aa	Known RBP	4.81	□□□□□ -1.64
FOX2	YKR009C	MRPL7	P36519	292 aa		4.81	□□□□□ -1.64
FOX2	YKR009C	THI6	P41835	540 aa		4.81	□□□□□ -1.64
FOX2	YKR009C	YFL052W	P43551	465 aa		4.81	□□□□□ -1.64
FOX2	YKR009C	GCV2	P49095	1034 aa		4.81	□□□□□ -1.64
FOX2	YKR009C	CAF130	P53280	1122 aa	Predicted RBP	4.81	□□□□□ -1.64
FOX2	YKR009C	SMC5	Q08204	1093 aa		4.81	□□□□□ -1.64
FOX2	YKR009C	DCS2	Q12123	353 aa		4.81	□□□□□ -1.64
FOX2	YKR009C	GET3	Q12154	354 aa	Known RBP	4.81	□□□□□ -1.64
FOX2	YKR009C	YHL026C	P38740	315 aa		4.81	□□□□□ -1.64
FOX2	YKR009C	NUP82	P40368	713 aa		4.81	□□□□□ -1.64
FOX2	YKR009C	SAD1	P43589	448 aa		4.81	□□□□□ -1.64
FOX2	YKR009C	DIP5	P53388	608 aa		4.81	□□□□□ -1.64
FOX2	YKR009C	YGL015C	P33199	130 aa		4.8	□□□□□ -1.64
FOX2	YKR009C	RPT1	P33299	467 aa	Known RBP	4.8	□□□□□ -1.64
FOX2	YKR009C	DRE2	P36152	348 aa		4.8	□□□□□ -1.64
FOX2	YKR009C	ISM1	P48526	1002 aa		4.8	□□□□□ -1.64
FOX2	YKR009C	ECM7	Q06200	448 aa		4.8	□□□□□ -1.64
FOX2	YKR009C	CUR1	Q06469	252 aa		4.8	□□□□□ -1.64
FOX2	YKR009C	SUP45	P12385	437 aa	Known RBP	4.8	□□□□□ -1.64
FOX2	YKR009C	YGR130C	P53278	816 aa		4.8	□□□□□ -1.64
FOX2	YKR009C	DOT1	Q04089	582 aa	Known RBP	4.8	□□□□□ -1.64
FOX2	YKR009C	GLN3	P18494	730 aa		4.79	□□□□□ -1.64
FOX2	YKR009C	RFS1	P38234	210 aa	Known RBP	4.79	□□□□□ -1.64
FOX2	YKR009C	FYV10	P40492	516 aa		4.79	□□□□□ -1.64
FOX2	YKR009C	ARP5	P53946	755 aa		4.79	□□□□□ -1.64
FOX2	YKR009C	TRS120	Q04183	1289 aa		4.79	□□□□□ -1.64
FOX2	YKR009C	ELG1	Q12050	791 aa		4.79	□□□□□ -1.64
FOX2	YKR009C	FOB1	O13329	566 aa		4.79	□□□□□ -1.64
FOX2	YKR009C	WHI2	P12611	486 aa		4.79	□□□□□ -1.64
FOX2	YKR009C	GSY1	P23337	708 aa		4.79	□□□□□ -1.64
FOX2	YKR009C	COT1	P32798	439 aa		4.79	□□□□□ -1.64
FOX2	YKR009C	APN2	P38207	520 aa		4.79	□□□□□ -1.64
FOX2	YKR009C	ORC6	P38826	435 aa		4.79	□□□□□ -1.64
FOX2	YKR009C	EAF5	P39995	279 aa		4.79	□□□□□ -1.64
FOX2	YKR009C	ESL1	P40456	1118 aa		4.79	□□□□□ -1.64
FOX2	YKR009C	DAK2	P43550	591 aa		4.79	□□□□□ -1.64
FOX2	YKR009C	YOR296W	Q08748	1289 aa		4.79	□□□□□ -1.64
FOX2	YKR009C	RAD59	Q12223	238 aa		4.79	□□□□□ -1.64
FOX2	YKR009C	PTC5	Q12511	572 aa		4.79	□□□□□ -1.64
FOX2	YKR009C	YEL076C-A	P0CX16	216 aa		4.78	□□□□□ -1.64
FOX2	YKR009C	YLR464W	P0CX17	216 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 1166.7 ms