RNA–Protein interactions for RNA: YJL176C

SWI3, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SWI3, Length 2,478 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWI3	YJL176C	WHI3	P34761	661 aa	Known RBP	5.19	□□□□□ -1.58
SWI3	YJL176C	FIR1	P40020	876 aa		5.19	□□□□□ -1.58
SWI3	YJL176C	FYV10	P40492	516 aa		5.19	□□□□□ -1.58
SWI3	YJL176C	UBA2	P52488	636 aa		5.19	□□□□□ -1.58
SWI3	YJL176C	VPS72	Q03388	795 aa		5.19	□□□□□ -1.58
SWI3	YJL176C	ADY4	Q05955	493 aa		5.19	□□□□□ -1.58
SWI3	YJL176C	ATG11	Q12527	1178 aa		5.19	□□□□□ -1.58
SWI3	YJL176C	HIS4	P00815	799 aa	Known RBP	5.18	□□□□□ -1.58
SWI3	YJL176C	PRP22	P24384	1145 aa	Known RBP	5.18	□□□□□ -1.58
SWI3	YJL176C	DUR3	P33413	735 aa		5.18	□□□□□ -1.58
SWI3	YJL176C	AVT3	P36062	692 aa		5.18	□□□□□ -1.58
SWI3	YJL176C	RFT1	P38206	574 aa	Predicted RBP	5.18	□□□□□ -1.58
SWI3	YJL176C	HYR1	P40581	163 aa	Known RBP	5.18	□□□□□ -1.58
SWI3	YJL176C	DAK2	P43550	591 aa		5.18	□□□□□ -1.58
SWI3	YJL176C	FUS2	Q05670	677 aa		5.18	□□□□□ -1.58
SWI3	YJL176C	SMC5	Q08204	1093 aa		5.18	□□□□□ -1.58
SWI3	YJL176C	YDR524C-B	Q3E6R4	66 aa		5.18	□□□□□ -1.58
SWI3	YJL176C	TCP1	P12612	559 aa	Known RBP	5.18	□□□□□ -1.58
SWI3	YJL176C	MBR1	P23493	339 aa		5.18	□□□□□ -1.58
SWI3	YJL176C	IRE1	P32361	1115 aa		5.18	□□□□□ -1.58
SWI3	YJL176C	SIP3	P38717	1229 aa		5.18	□□□□□ -1.58
SWI3	YJL176C	THI6	P41835	540 aa		5.18	□□□□□ -1.58
SWI3	YJL176C	CUE3	P53137	624 aa	Known RBP	5.18	□□□□□ -1.58
SWI3	YJL176C	UBC1	P21734	215 aa	Known RBP	5.17	□□□□□ -1.58
SWI3	YJL176C	BMH1	P29311	267 aa	Known RBP	5.17	□□□□□ -1.58
SWI3	YJL176C	SMY2	P32909	740 aa	Known RBP	5.17	□□□□□ -1.58
SWI3	YJL176C	PET10	P36139	283 aa		5.17	□□□□□ -1.58
SWI3	YJL176C	PIH1	P38768	344 aa		5.17	□□□□□ -1.58
SWI3	YJL176C	RPN3	P40016	523 aa	Known RBP	5.17	□□□□□ -1.58
SWI3	YJL176C	COG8	Q04632	607 aa		5.17	□□□□□ -1.58
SWI3	YJL176C	FOB1	O13329	566 aa		5.17	□□□□□ -1.58
SWI3	YJL176C	YEL076C-A	P0CX16	216 aa		5.17	□□□□□ -1.58
SWI3	YJL176C	YLR464W	P0CX17	216 aa		5.17	□□□□□ -1.58
SWI3	YJL176C	MIP1	P15801	1254 aa		5.17	□□□□□ -1.58
SWI3	YJL176C	EFT1	P32324	842 aa	Known RBP	5.17	□□□□□ -1.58
SWI3	YJL176C	YEL076C	P39971	216 aa		5.17	□□□□□ -1.58
SWI3	YJL176C	NUP82	P40368	713 aa		5.17	□□□□□ -1.58
SWI3	YJL176C	CLA4	P48562	842 aa		5.17	□□□□□ -1.58
SWI3	YJL176C	AZR1	P50080	613 aa		5.17	□□□□□ -1.58
SWI3	YJL176C	NCS2	P53923	493 aa	Predicted RBP	5.17	□□□□□ -1.58
SWI3	YJL176C	LDB19	Q12502	818 aa		5.17	□□□□□ -1.58
SWI3	YJL176C	DED1	P06634	604 aa	Known RBP	5.16	□□□□□ -1.58
SWI3	YJL176C	KEX1	P09620	729 aa		5.16	□□□□□ -1.58
SWI3	YJL176C	ATG19	P35193	415 aa		5.16	□□□□□ -1.58
SWI3	YJL176C	DID4	P36108	232 aa		5.16	□□□□□ -1.58
SWI3	YJL176C	GUA1	P38625	525 aa	Known RBP	5.16	□□□□□ -1.58
SWI3	YJL176C	EAF5	P39995	279 aa		5.16	□□□□□ -1.58
SWI3	YJL176C	ULP2	P40537	1034 aa	Predicted RBP	5.16	□□□□□ -1.58
SWI3	YJL176C	PFK1	P16861	987 aa	Known RBP	5.16	□□□□□ -1.58
SWI3	YJL176C	RAM2	P29703	316 aa		5.16	□□□□□ -1.58
SWI3	YJL176C	MSS51	P32335	436 aa		5.16	□□□□□ -1.58
SWI3	YJL176C	ELM1	P32801	640 aa		5.16	□□□□□ -1.58
SWI3	YJL176C	ALD5	P40047	520 aa	Known RBP	5.16	□□□□□ -1.58
SWI3	YJL176C	CCT5	P40413	562 aa	Known RBP	5.16	□□□□□ -1.58
SWI3	YJL176C	SGM1	P47166	707 aa		5.16	□□□□□ -1.58
SWI3	YJL176C	GUP1	P53154	560 aa		5.16	□□□□□ -1.58
SWI3	YJL176C	CUS1	Q02554	436 aa	Predicted RBP	5.16	□□□□□ -1.58
SWI3	YJL176C	ROD1	Q02805	837 aa		5.16	□□□□□ -1.58
SWI3	YJL176C	COQ9	Q05779	260 aa		5.16	□□□□□ -1.58
SWI3	YJL176C	NOC3	Q07896	663 aa	Predicted RBP	5.16	□□□□□ -1.58
SWI3	YJL176C	PSR2	Q07949	397 aa		5.16	□□□□□ -1.58
SWI3	YJL176C	HFI1	Q12060	488 aa		5.16	□□□□□ -1.58
SWI3	YJL176C	HIF1	Q12373	385 aa		5.16	□□□□□ -1.58
SWI3	YJL176C	POT1	P27796	417 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.58	not detected
SWI3	YJL176C	YKT6	P36015	200 aa	Known RBP	5.15	□□□□□ -1.58
SWI3	YJL176C	GRS1	P38088	690 aa	Known RBP	5.15	□□□□□ -1.58
SWI3	YJL176C	VTC2	P43585	828 aa		5.15	□□□□□ -1.58
SWI3	YJL176C	NCR1	Q12200	1170 aa		5.15	□□□□□ -1.58
SWI3	YJL176C	DDP1	Q99321	188 aa	Known RBP	5.15	□□□□□ -1.58
SWI3	YJL176C	RPL22A	P05749	121 aa	Known RBP	5.15	□□□□□ -1.59
SWI3	YJL176C	DBP5	P20449	482 aa	Known RBP	5.15	□□□□□ -1.59
SWI3	YJL176C	ISY1	P21374	235 aa	Predicted RBP	5.15	□□□□□ -1.59
SWI3	YJL176C	CDC15	P27636	974 aa		5.15	□□□□□ -1.59
SWI3	YJL176C	HIR1	P32479	840 aa		5.15	□□□□□ -1.59
SWI3	YJL176C	DJP1	P40564	432 aa		5.15	□□□□□ -1.59
SWI3	YJL176C	ACF4	P47129	309 aa		5.15	□□□□□ -1.59
SWI3	YJL176C	SEC5	P89102	971 aa		5.15	□□□□□ -1.59
SWI3	YJL176C	ETT1	Q08421	412 aa	Known RBP	5.15	□□□□□ -1.59
SWI3	YJL176C	RPC53	P25441	422 aa		5.14	□□□□□ -1.59
SWI3	YJL176C	INP51	P40559	946 aa	Known RBP	5.14	□□□□□ -1.59
SWI3	YJL176C	JJJ3	P47138	172 aa		5.14	□□□□□ -1.59
SWI3	YJL176C	YPT11	P48559	417 aa		5.14	□□□□□ -1.59
SWI3	YJL176C	HAP5	Q02516	242 aa		5.14	□□□□□ -1.59
SWI3	YJL176C	AIM44	Q99299	758 aa		5.14	□□□□□ -1.59
SWI3	YJL176C	MOT1	P32333	1867 aa		5.14	□□□□□ -1.59
SWI3	YJL176C	FUB1	P25659	250 aa		5.14	□□□□□ -1.59
SWI3	YJL176C	VPS35	P34110	944 aa		5.14	□□□□□ -1.59
SWI3	YJL176C	PPS1	P38148	807 aa		5.14	□□□□□ -1.59
SWI3	YJL176C	TVP23	P38962	199 aa		5.14	□□□□□ -1.59
SWI3	YJL176C	CIR1	P42940	261 aa		5.14	□□□□□ -1.59
SWI3	YJL176C	COT1	P32798	439 aa		5.13	□□□□□ -1.59
SWI3	YJL176C	BRL1	P38770	471 aa		5.13	□□□□□ -1.59
SWI3	YJL176C	AVT1	P47082	602 aa		5.13	□□□□□ -1.59
SWI3	YJL176C	FOL2	P51601	243 aa	Known RBP	5.13	□□□□□ -1.59
SWI3	YJL176C	RTT102	P53330	157 aa		5.13	□□□□□ -1.59
SWI3	YJL176C	TOF1	P53840	1238 aa		5.13	□□□□□ -1.59
SWI3	YJL176C	YNL115C	P53925	644 aa		5.13	□□□□□ -1.59
SWI3	YJL176C	ARK1	P53974	638 aa		5.13	□□□□□ -1.59
SWI3	YJL176C	EAR1	Q03212	550 aa		5.13	□□□□□ -1.59
SWI3	YJL176C	APC11	Q12157	165 aa		5.13	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms