RNA–Protein interactions for RNA: YJL141C

YAK1, Transcript of Serine-threonine protein kinase, yeast

Gene YAK1, Length 2,424 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAK1	YJL141C	RAD17	P48581	401 aa		3.62	□□□□□ -1.83
YAK1	YJL141C	KEL2	P50090	882 aa		3.62	□□□□□ -1.83
YAK1	YJL141C	VPS16	Q03308	798 aa		3.62	□□□□□ -1.83
YAK1	YJL141C	RPN4	Q03465	531 aa		3.62	□□□□□ -1.83
YAK1	YJL141C	UBX2	Q04228	584 aa		3.62	□□□□□ -1.83
YAK1	YJL141C	PUF6	Q04373	656 aa	Known RBP	3.62	□□□□□ -1.83
YAK1	YJL141C	TMA64	Q04600	565 aa	Known RBP	3.62	□□□□□ -1.83
YAK1	YJL141C	NSE3	Q05541	303 aa		3.62	□□□□□ -1.83
YAK1	YJL141C	TOS4	Q06266	489 aa		3.62	□□□□□ -1.83
YAK1	YJL141C	YDL121C	Q07541	149 aa		3.62	□□□□□ -1.83
YAK1	YJL141C	SFI1	Q12369	946 aa		3.62	□□□□□ -1.83
YAK1	YJL141C	IKI3	Q06706	1349 aa	Known RBP	3.61	□□□□□ -1.83
YAK1	YJL141C	BUD14	P27637	709 aa		3.61	□□□□□ -1.83
YAK1	YJL141C	PTH2	P34222	208 aa		3.61	□□□□□ -1.83
YAK1	YJL141C	UBP12	P39538	1254 aa		3.61	□□□□□ -1.83
YAK1	YJL141C	ARB1	P40024	610 aa	Known RBP	3.61	□□□□□ -1.83
YAK1	YJL141C	MAM1	P40065	302 aa		3.61	□□□□□ -1.83
YAK1	YJL141C	ESF2	P53743	316 aa	Known RBP	3.61	□□□□□ -1.83
YAK1	YJL141C	PMT7	Q06644	662 aa		3.61	□□□□□ -1.83
YAK1	YJL141C	PCL8	Q08966	492 aa		3.61	□□□□□ -1.83
YAK1	YJL141C	SNU66	Q12420	587 aa	Predicted RBP	3.61	□□□□□ -1.83
YAK1	YJL141C	TCB1	Q12466	1186 aa		3.61	□□□□□ -1.83
YAK1	YJL141C	HMG1	P12683	1054 aa		3.61	□□□□□ -1.83
YAK1	YJL141C	SEC15	P22224	910 aa		3.61	□□□□□ -1.83
YAK1	YJL141C	BOI1	P38041	980 aa	Known RBP	3.61	□□□□□ -1.83
YAK1	YJL141C	ETP1	P38748	585 aa	Known RBP	3.61	□□□□□ -1.83
YAK1	YJL141C	ERP2	P39704	215 aa		3.61	□□□□□ -1.83
YAK1	YJL141C	MEP1	P40260	492 aa		3.61	□□□□□ -1.83
YAK1	YJL141C	YJR098C	P47139	656 aa		3.61	□□□□□ -1.83
YAK1	YJL141C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.61	□□□□□ -1.83	not detected
YAK1	YJL141C	SVF1	Q05515	481 aa		3.61	□□□□□ -1.83
YAK1	YJL141C	YDL073W	Q07454	984 aa		3.61	□□□□□ -1.83
YAK1	YJL141C	DBP10	Q12389	995 aa	Known RBP	3.61	□□□□□ -1.83
YAK1	YJL141C	ERP4	Q12450	207 aa		3.61	□□□□□ -1.83
YAK1	YJL141C	YIL002W-A	Q3E7Z5	69 aa		3.61	□□□□□ -1.83
YAK1	YJL141C	PET494	P07390	489 aa	Predicted RBP	3.6	□□□□□ -1.83
YAK1	YJL141C	DLD1	P32891	587 aa		3.6	□□□□□ -1.83
YAK1	YJL141C	NIP100	P33420	868 aa		3.6	□□□□□ -1.83
YAK1	YJL141C	SDS3	P40505	327 aa		3.6	□□□□□ -1.83
YAK1	YJL141C	GPI8	P49018	411 aa		3.6	□□□□□ -1.83
YAK1	YJL141C	ROM1	P53046	1155 aa		3.6	□□□□□ -1.83
YAK1	YJL141C	SSQ1	Q05931	657 aa	Predicted RBP	3.6	□□□□□ -1.83
YAK1	YJL141C	CLP1	Q08685	445 aa	Predicted RBP	3.6	□□□□□ -1.83
YAK1	YJL141C	SLM3	Q12093	417 aa		3.6	□□□□□ -1.83
YAK1	YJL141C	YIL177C	P40434	1758 aa		3.6	□□□□□ -1.83
YAK1	YJL141C	YJL225C	P40889	1758 aa		3.6	□□□□□ -1.83
YAK1	YJL141C	YLR419W	Q06698	1435 aa	Known RBP	3.6	□□□□□ -1.83
YAK1	YJL141C	NUP145	P49687	1317 aa		3.6	□□□□□ -1.83
YAK1	YJL141C	CDC37	P06101	506 aa	Known RBP	3.6	□□□□□ -1.83
YAK1	YJL141C	PET123	P17558	318 aa		3.6	□□□□□ -1.83
YAK1	YJL141C	ESL2	P36168	1195 aa		3.6	□□□□□ -1.83
YAK1	YJL141C	MET18	P40469	1032 aa		3.6	□□□□□ -1.83
YAK1	YJL141C	QDR1	P40475	563 aa		3.6	□□□□□ -1.83
YAK1	YJL141C	LAM5	P43560	674 aa		3.6	□□□□□ -1.83
YAK1	YJL141C	IES1	P43579	692 aa		3.6	□□□□□ -1.83
YAK1	YJL141C	MSN5	P52918	1224 aa		3.6	□□□□□ -1.83
YAK1	YJL141C	TBF1	Q02457	562 aa		3.6	□□□□□ -1.83
YAK1	YJL141C	KRE28	Q04431	385 aa		3.6	□□□□□ -1.83
YAK1	YJL141C	SML1	Q04964	104 aa		3.6	□□□□□ -1.83
YAK1	YJL141C	MHP1	P43638	1398 aa		3.59	□□□□□ -1.83
YAK1	YJL141C	ATG19	P35193	415 aa		3.59	□□□□□ -1.83
YAK1	YJL141C	TBS1	P38114	1094 aa		3.59	□□□□□ -1.83
YAK1	YJL141C	RKM3	P38222	552 aa		3.59	□□□□□ -1.83
YAK1	YJL141C	UTP18	P40362	594 aa	Predicted RBP	3.59	□□□□□ -1.83
YAK1	YJL141C	ROG3	P43602	733 aa		3.59	□□□□□ -1.83
YAK1	YJL141C	SRB7	P47822	140 aa		3.59	□□□□□ -1.83
YAK1	YJL141C	ENP2	P48234	707 aa	Known RBP	3.59	□□□□□ -1.83
YAK1	YJL141C	RSM28	Q03430	361 aa		3.59	□□□□□ -1.83
YAK1	YJL141C	TY1A-MR1	Q04215	440 aa		3.59	□□□□□ -1.83
YAK1	YJL141C	PNP1	Q05788	311 aa		3.59	□□□□□ -1.83
YAK1	YJL141C	BDF2	Q07442	638 aa		3.59	□□□□□ -1.83
YAK1	YJL141C	CIR2	Q08822	631 aa		3.59	□□□□□ -1.83
YAK1	YJL141C	HMI1	Q12039	706 aa		3.59	□□□□□ -1.83
YAK1	YJL141C	YME2	P32843	850 aa		3.59	□□□□□ -1.84
YAK1	YJL141C	MAL31	P38156	614 aa		3.59	□□□□□ -1.84
YAK1	YJL141C	MNN1	P39106	762 aa		3.59	□□□□□ -1.84
YAK1	YJL141C	HOP2	P53187	214 aa		3.59	□□□□□ -1.84
YAK1	YJL141C	LCD1	Q04377	747 aa		3.59	□□□□□ -1.84
YAK1	YJL141C	YDL144C	Q07589	356 aa		3.59	□□□□□ -1.84
YAK1	YJL141C	PPM2	Q08282	695 aa		3.59	□□□□□ -1.84
YAK1	YJL141C	PIN2	Q12057	282 aa		3.59	□□□□□ -1.84
YAK1	YJL141C	CTT1	P06115	562 aa		3.58	□□□□□ -1.84
YAK1	YJL141C	TPM1	P17536	199 aa	Known RBP	3.58	□□□□□ -1.84
YAK1	YJL141C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
YAK1	YJL141C	PPH3	P32345	308 aa		3.58	□□□□□ -1.84
YAK1	YJL141C	MRE11	P32829	692 aa		3.58	□□□□□ -1.84
YAK1	YJL141C	SPC72	P39723	622 aa		3.58	□□□□□ -1.84
YAK1	YJL141C	YEN1	P40028	759 aa		3.58	□□□□□ -1.84
YAK1	YJL141C	RTT105	P40063	208 aa		3.58	□□□□□ -1.84
YAK1	YJL141C	ATG3	P40344	310 aa		3.58	□□□□□ -1.84
YAK1	YJL141C	MAD1	P40957	749 aa		3.58	□□□□□ -1.84
YAK1	YJL141C	ACS2	P52910	683 aa	Known RBP	3.58	□□□□□ -1.84
YAK1	YJL141C	ATG1	P53104	897 aa		3.58	□□□□□ -1.84
YAK1	YJL141C	SRP1	Q02821	542 aa	Known RBP	3.58	□□□□□ -1.84
YAK1	YJL141C	TSR1	Q07381	788 aa	Known RBP	3.58	□□□□□ -1.84
YAK1	YJL141C	MCM16	Q12262	181 aa		3.58	□□□□□ -1.84
YAK1	YJL141C	COB	P00163	385 aa		3.58	□□□□□ -1.84
YAK1	YJL141C	SEN2	P16658	377 aa		3.58	□□□□□ -1.84
YAK1	YJL141C	APN1	P22936	367 aa		3.58	□□□□□ -1.84
YAK1	YJL141C	SMY1	P32364	656 aa	Known RBP	3.58	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms