RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W SGO1Q08490 590 aa2.58□□□□□ -2
TRA1YHR099W RSR1P13856 272 aa2.58□□□□□ -2
TRA1YHR099W GRS1P38088 690 aaKnown RBP2.58□□□□□ -2
TRA1YHR099W OSH3P38713 996 aaKnown RBP2.58□□□□□ -2
TRA1YHR099W SPF1P39986 1215 aaKnown RBP2.58□□□□□ -2
TRA1YHR099W MPS2P53159 387 aa2.58□□□□□ -2
TRA1YHR099W FCF2Q12035 217 aaPredicted RBP2.58□□□□□ -2
TRA1YHR099W PTC5Q12511 572 aa2.58□□□□□ -2
TRA1YHR099W MSS116P15424 664 aaKnown RBP2.58□□□□□ -2
TRA1YHR099W KES1P35844 434 aaKnown RBP2.58□□□□□ -2
TRA1YHR099W NCL1P38205 684 aaKnown RBP2.58□□□□□ -2
TRA1YHR099W IES2P40154 320 aa2.58□□□□□ -2
TRA1YHR099W APS3P47064 194 aa2.58□□□□□ -2
TRA1YHR099W EFM3P47163 339 aa2.58□□□□□ -2
TRA1YHR099W NUT1P53114 1132 aa2.58□□□□□ -2
TRA1YHR099W YOL098CQ12496 1037 aa2.58□□□□□ -2
TRA1YHR099W SEC2P17065 759 aa2.58□□□□□ -2
TRA1YHR099W ATG15P25641 520 aa2.58□□□□□ -2
TRA1YHR099W COG6P53959 839 aa2.58□□□□□ -2
TRA1YHR099W COS7Q07788 383 aa2.58□□□□□ -2
TRA1YHR099W SSF2Q12153 453 aaPredicted RBP2.58□□□□□ -2
TRA1YHR099W DCD1P06773 312 aa2.58□□□□□ -2
TRA1YHR099W YEF3P16521 1044 aaKnown RBP2.58□□□□□ -2
TRA1YHR099W SAK1P38990 1142 aa2.58□□□□□ -2
TRA1YHR099W RFX1P48743 811 aa2.58□□□□□ -2
TRA1YHR099W RPS9BP05755 195 aaKnown RBP2.58□□□□□ -2
TRA1YHR099W SPB1P25582 841 aaPredicted RBP2.58□□□□□ -2
TRA1YHR099W BRF1P29056 596 aa2.58□□□□□ -2
TRA1YHR099W SPP381P38282 291 aaPredicted RBP2.58□□□□□ -2
TRA1YHR099W SAE2P46946 345 aa2.58□□□□□ -2
TRA1YHR099W PRP31P49704 494 aaPredicted RBP2.58□□□□□ -2
TRA1YHR099W NCS2P53923 493 aaPredicted RBP2.58□□□□□ -2
TRA1YHR099W COG4Q06096 861 aa2.58□□□□□ -2
TRA1YHR099W LAG2Q92325 660 aa2.58□□□□□ -2
TRA1YHR099W NTH1P32356 751 aa2.58□□□□□ -2
TRA1YHR099W MIA40P36046 403 aa2.58□□□□□ -2
TRA1YHR099W BOI1P38041 980 aaKnown RBP2.58□□□□□ -2
TRA1YHR099W YHL008CP38750 627 aa2.58□□□□□ -2
TRA1YHR099W IRC6P43615 237 aa2.58□□□□□ -2
TRA1YHR099W VPS4P52917 437 aa2.58□□□□□ -2
TRA1YHR099W RTC4P53850 401 aa2.58□□□□□ -2
TRA1YHR099W RAD33Q04231 177 aa2.58□□□□□ -2
TRA1YHR099W TUS1Q06412 1307 aa2.58□□□□□ -2
TRA1YHR099W CDC19P00549 500 aaKnown RBP2.57□□□□□ -2
TRA1YHR099W RPB4P20433 221 aaPredicted RBP2.57□□□□□ -2
TRA1YHR099W PAC11P40960 533 aa2.57□□□□□ -2
TRA1YHR099W CWC27Q02770 301 aa2.57□□□□□ -2
TRA1YHR099W TYW1Q08960 810 aaKnown RBP2.57□□□□□ -2
TRA1YHR099W BUD4P47136 1447 aa2.57□□□□□ -2
TRA1YHR099W YCR051WP25631 222 aa2.57□□□□□ -2
TRA1YHR099W SBE2P42223 864 aaKnown RBP2.57□□□□□ -2
TRA1YHR099W FIG4P42837 879 aa2.57□□□□□ -2
TRA1YHR099W MAD3P47074 515 aa2.57□□□□□ -2
TRA1YHR099W ECM27P47144 725 aa2.57□□□□□ -2
TRA1YHR099W NAN1Q02931 896 aaKnown RBP2.57□□□□□ -2
TRA1YHR099W YDR541CQ03049 344 aa2.57□□□□□ -2
TRA1YHR099W NUR1Q12066 484 aa2.57□□□□□ -2
TRA1YHR099W CAD1P24813 409 aaKnown RBP2.57□□□□□ -2
TRA1YHR099W AFG1P32317 509 aa2.57□□□□□ -2
TRA1YHR099W MCX1P38323 520 aaPredicted RBP2.57□□□□□ -2
TRA1YHR099W REV7P38927 245 aa2.57□□□□□ -2
TRA1YHR099W ERP6P53198 216 aa2.57□□□□□ -2
TRA1YHR099W FRT1Q99332 602 aa2.57□□□□□ -2
TRA1YHR099W STI1P15705 589 aaKnown RBP RIP-Chip data2.57□□□□□ -2 RIP-Chip
TRA1YHR099W FRE1P32791 686 aa2.57□□□□□ -2
TRA1YHR099W OAF1P39720 1047 aaPredicted RBP2.57□□□□□ -2
TRA1YHR099W SEC26P41810 973 aaKnown RBP2.57□□□□□ -2
TRA1YHR099W ATP25Q03153 612 aa2.57□□□□□ -2
TRA1YHR099W TRM82Q03774 444 aa2.57□□□□□ -2
TRA1YHR099W POL1P13382 1468 aa2.57□□□□□ -2
TRA1YHR099W MDH1P17505 334 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
TRA1YHR099W VPS33P20795 691 aa2.57□□□□□ -2
TRA1YHR099W DIT1P21623 536 aa2.57□□□□□ -2
TRA1YHR099W KDX1P36005 433 aa2.57□□□□□ -2
TRA1YHR099W POL12P38121 705 aaPredicted RBP2.57□□□□□ -2
TRA1YHR099W GTT3P39996 337 aa2.57□□□□□ -2
TRA1YHR099W YET3Q07451 203 aa2.57□□□□□ -2
TRA1YHR099W SLX4Q12098 748 aa2.57□□□□□ -2
TRA1YHR099W MED11Q99278 115 aa2.57□□□□□ -2
TRA1YHR099W PLC1P32383 869 aa2.57□□□□□ -2
TRA1YHR099W LHS1P36016 881 aa2.57□□□□□ -2
TRA1YHR099W JNM1P36224 373 aa2.57□□□□□ -2
TRA1YHR099W MVP1P40959 511 aaKnown RBP2.57□□□□□ -2
TRA1YHR099W TRF5P48561 642 aaKnown RBP2.57□□□□□ -2
TRA1YHR099W RMR1P53060 241 aa2.57□□□□□ -2
TRA1YHR099W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
TRA1YHR099W FCP1Q03254 732 aa2.57□□□□□ -2
TRA1YHR099W RQC1Q05468 723 aaKnown RBP2.57□□□□□ -2
TRA1YHR099W SUR2P38992 349 aa2.57□□□□□ -2
TRA1YHR099W MEC3Q02574 474 aa2.57□□□□□ -2
TRA1YHR099W RVB1Q03940 463 aaKnown RBP2.57□□□□□ -2
TRA1YHR099W BSP1Q06604 576 aa2.57□□□□□ -2
TRA1YHR099W RIO1Q12196 484 aaKnown RBP2.57□□□□□ -2
TRA1YHR099W PET494P07390 489 aaPredicted RBP2.57□□□□□ -2
TRA1YHR099W PRP16P15938 1071 aaPredicted RBP2.57□□□□□ -2
TRA1YHR099W HSM3P38348 480 aa2.57□□□□□ -2
TRA1YHR099W NPR3P38742 1146 aa2.57□□□□□ -2
TRA1YHR099W RPT2P40327 437 aaKnown RBP2.57□□□□□ -2
TRA1YHR099W YIL077CP40508 320 aa2.57□□□□□ -2
TRA1YHR099W ATG1P53104 897 aa2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 269.4 ms