RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C RSC58Q07979 502 aa2.03□□□□□ -2.08
UFD2YDL190C HEM13P11353 328 aaKnown RBP2.03□□□□□ -2.08
UFD2YDL190C RAD4P14736 754 aa2.03□□□□□ -2.08
UFD2YDL190C TOD6P34219 525 aa2.03□□□□□ -2.08
UFD2YDL190C TSA1P34760 196 aaKnown RBP2.03□□□□□ -2.08
UFD2YDL190C SPF1P39986 1215 aaKnown RBP2.03□□□□□ -2.08
UFD2YDL190C TNA1P53322 534 aa2.03□□□□□ -2.08
UFD2YDL190C NAN1Q02931 896 aaKnown RBP2.03□□□□□ -2.08
UFD2YDL190C MRL1Q06815 381 aa2.03□□□□□ -2.08
UFD2YDL190C FAL1Q12099 399 aaKnown RBP2.03□□□□□ -2.08
UFD2YDL190C DRS2P39524 1355 aa2.02□□□□□ -2.09
UFD2YDL190C BAS1P22035 811 aa2.02□□□□□ -2.09
UFD2YDL190C PUF4P25339 888 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
UFD2YDL190C YKL069WP36088 180 aa2.02□□□□□ -2.09
UFD2YDL190C GIP4P39732 760 aa2.02□□□□□ -2.09
UFD2YDL190C TIM54P47045 478 aa2.02□□□□□ -2.09
UFD2YDL190C RIM8P53179 542 aa2.02□□□□□ -2.09
UFD2YDL190C ROD1Q02805 837 aa2.02□□□□□ -2.09
UFD2YDL190C EEB1Q02891 456 aa2.02□□□□□ -2.09
UFD2YDL190C HOS3Q02959 697 aaKnown RBP2.02□□□□□ -2.09
UFD2YDL190C SPO21Q12411 609 aa2.02□□□□□ -2.09
UFD2YDL190C RPS13P05756 151 aaKnown RBP2.02□□□□□ -2.09
UFD2YDL190C PRP6P19735 899 aaPredicted RBP2.02□□□□□ -2.09
UFD2YDL190C YCR015CP25616 317 aa2.02□□□□□ -2.09
UFD2YDL190C RAD27P26793 382 aa2.02□□□□□ -2.09
UFD2YDL190C AFG2P32794 780 aa2.02□□□□□ -2.09
UFD2YDL190C FPR3P38911 411 aaKnown RBP2.02□□□□□ -2.09
UFD2YDL190C YPL277CQ08989 487 aa2.02□□□□□ -2.09
UFD2YDL190C TAF1P46677 1066 aa2.01□□□□□ -2.09
UFD2YDL190C GNP1P48813 663 aa2.01□□□□□ -2.09
UFD2YDL190C TYW3P53177 273 aa2.01□□□□□ -2.09
UFD2YDL190C RAT1Q02792 1006 aaKnown RBP2.01□□□□□ -2.09
UFD2YDL190C HDA2Q06629 674 aa2.01□□□□□ -2.09
UFD2YDL190C TMA46Q12000 345 aaKnown RBP2.01□□□□□ -2.09
UFD2YDL190C THI80P35202 319 aa2.01□□□□□ -2.09
UFD2YDL190C SPT20P50875 604 aa2.01□□□□□ -2.09
UFD2YDL190C RCL1Q08096 367 aaPredicted RBP2.01□□□□□ -2.09
UFD2YDL190C PPM2Q08282 695 aa2.01□□□□□ -2.09
UFD2YDL190C SPO14P36126 1683 aa2.01□□□□□ -2.09
UFD2YDL190C FLR1P38124 548 aa2□□□□□ -2.09
UFD2YDL190C NUP82P40368 713 aa2□□□□□ -2.09
UFD2YDL190C ROT1Q03691 256 aa2□□□□□ -2.09
UFD2YDL190C NAB6Q03735 1134 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
UFD2YDL190C YPL260WQ08977 551 aa2□□□□□ -2.09
UFD2YDL190C TRM732Q03496 1420 aa2□□□□□ -2.09
UFD2YDL190C YPK9Q12697 1472 aa2□□□□□ -2.09
UFD2YDL190C CYC1P00044 109 aaPredicted RBP2□□□□□ -2.09
UFD2YDL190C SOD2P00447 233 aa2□□□□□ -2.09
UFD2YDL190C MET6P05694 767 aaKnown RBP2□□□□□ -2.09
UFD2YDL190C TAF13P11747 167 aa2□□□□□ -2.09
UFD2YDL190C MLS1P30952 554 aa2□□□□□ -2.09
UFD2YDL190C TIM23P32897 222 aa2□□□□□ -2.09
UFD2YDL190C ENV11P53246 860 aa2□□□□□ -2.09
UFD2YDL190C RSM24Q03976 319 aa2□□□□□ -2.09
UFD2YDL190C POB3Q04636 552 aaKnown RBP2□□□□□ -2.09
UFD2YDL190C SGD1Q06132 899 aa2□□□□□ -2.09
UFD2YDL190C CHD1P32657 1468 aa2□□□□□ -2.09
UFD2YDL190C TRP2P00899 507 aaKnown RBP2□□□□□ -2.09
UFD2YDL190C PHO8P11491 566 aa2□□□□□ -2.09
UFD2YDL190C SYP1P25623 870 aaKnown RBP2□□□□□ -2.09
UFD2YDL190C LYP1P32487 611 aa2□□□□□ -2.09
UFD2YDL190C MKK2P32491 506 aa2□□□□□ -2.09
UFD2YDL190C ABD1P32783 436 aaPredicted RBP2□□□□□ -2.09
UFD2YDL190C YBR184WP38299 523 aa2□□□□□ -2.09
UFD2YDL190C YHR020WP38708 688 aaKnown RBP2□□□□□ -2.09
UFD2YDL190C PIK1P39104 1066 aa2□□□□□ -2.09
UFD2YDL190C HXT13P39924 564 aa2□□□□□ -2.09
UFD2YDL190C SEC26P41810 973 aaKnown RBP2□□□□□ -2.09
UFD2YDL190C KRI1P42846 591 aaKnown RBP2□□□□□ -2.09
UFD2YDL190C HXT17P53631 564 aa2□□□□□ -2.09
UFD2YDL190C SIW14P53965 281 aa2□□□□□ -2.09
UFD2YDL190C HXT15P54854 567 aa2□□□□□ -2.09
UFD2YDL190C SPO20Q04359 397 aa2□□□□□ -2.09
UFD2YDL190C FLC1Q08967 793 aa2□□□□□ -2.09
UFD2YDL190C YRF1-1P0CX20 1796 aa1.99□□□□□ -2.09
UFD2YDL190C YRF1-5P0CX21 1796 aa1.99□□□□□ -2.09
UFD2YDL190C YRF1-8P0CX22 1796 aa1.99□□□□□ -2.09
UFD2YDL190C VPS15P22219 1454 aa1.99□□□□□ -2.09
UFD2YDL190C CMP2P14747 604 aa1.99□□□□□ -2.09
UFD2YDL190C AGP1P25376 633 aa1.99□□□□□ -2.09
UFD2YDL190C STE5P32917 917 aa1.99□□□□□ -2.09
UFD2YDL190C RER2P35196 286 aa1.99□□□□□ -2.09
UFD2YDL190C MCM7P38132 845 aa1.99□□□□□ -2.09
UFD2YDL190C LAM1P38851 1228 aa1.99□□□□□ -2.09
UFD2YDL190C MNN1P39106 762 aa1.99□□□□□ -2.09
UFD2YDL190C RSP5P39940 809 aaKnown RBP1.99□□□□□ -2.09
UFD2YDL190C CHZ1P40019 153 aaPredicted RBP1.99□□□□□ -2.09
UFD2YDL190C YGR125WP53273 1036 aa1.99□□□□□ -2.09
UFD2YDL190C ESC2Q06340 456 aa1.99□□□□□ -2.09
UFD2YDL190C OSH2Q12451 1283 aa1.99□□□□□ -2.09
UFD2YDL190C TY1B-NL2Q99337 1749 aaKnown RBP1.99□□□□□ -2.09
UFD2YDL190C PAN1P32521 1480 aa1.99□□□□□ -2.09
UFD2YDL190C YLR358CO13565 187 aa1.99□□□□□ -2.09
UFD2YDL190C SBA1P28707 216 aaKnown RBP1.99□□□□□ -2.09
UFD2YDL190C RPL8BP29453 256 aaKnown RBP1.99□□□□□ -2.09
UFD2YDL190C RFC5P38251 354 aa1.99□□□□□ -2.09
UFD2YDL190C YFL054CP43549 646 aa1.99□□□□□ -2.09
UFD2YDL190C HNT2P49775 206 aa1.99□□□□□ -2.09
UFD2YDL190C MAP1Q01662 387 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
UFD2YDL190C YLR225CQ05948 407 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 64.6 ms