RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C MDJ2P42834 146 aa1.19□□□□□ -2.22
VAM6YDL077C YGL140CP53120 1219 aa1.19□□□□□ -2.22
VAM6YDL077C PRP43P53131 767 aaKnown RBP1.19□□□□□ -2.22
VAM6YDL077C SDA1P53313 767 aaKnown RBP1.19□□□□□ -2.22
VAM6YDL077C COP1P53622 1201 aaKnown RBP1.19□□□□□ -2.22
VAM6YDL077C CUS1Q02554 436 aaPredicted RBP1.19□□□□□ -2.22
VAM6YDL077C SWP1Q02795 286 aa1.19□□□□□ -2.22
VAM6YDL077C YMR102CQ03177 834 aa1.19□□□□□ -2.22
VAM6YDL077C GRX3Q03835 250 aa1.19□□□□□ -2.22
VAM6YDL077C YKU80Q04437 629 aa1.19□□□□□ -2.22
VAM6YDL077C RRN11Q04712 507 aa1.19□□□□□ -2.22
VAM6YDL077C PEX19Q07418 342 aa1.19□□□□□ -2.22
VAM6YDL077C NOP6Q07623 225 aaKnown RBP1.19□□□□□ -2.22
VAM6YDL077C RTC5Q12108 567 aaKnown RBP1.19□□□□□ -2.22
VAM6YDL077C CHS5Q12114 671 aaKnown RBP1.19□□□□□ -2.22
VAM6YDL077C SLP1Q12232 587 aa1.19□□□□□ -2.22
VAM6YDL077C TAF3Q12297 353 aa1.19□□□□□ -2.22
VAM6YDL077C IES3Q12345 250 aa1.19□□□□□ -2.22
VAM6YDL077C GPR1Q12361 961 aa1.19□□□□□ -2.22
VAM6YDL077C TY1B-BRQ12193 1756 aa1.19□□□□□ -2.22
VAM6YDL077C TY1B-GR3Q12316 1755 aa1.19□□□□□ -2.22
VAM6YDL077C TY1B-ORQ92393 1755 aa1.19□□□□□ -2.22
VAM6YDL077C YRF1-2P40105 1681 aa1.19□□□□□ -2.22
VAM6YDL077C LTE1P07866 1435 aa1.19□□□□□ -2.22
VAM6YDL077C YPR089WO13585 888 aa1.18□□□□□ -2.22
VAM6YDL077C CDC37P06101 506 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C CDC31P06704 161 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C PET494P07390 489 aaPredicted RBP1.18□□□□□ -2.22
VAM6YDL077C CDC16P09798 840 aa1.18□□□□□ -2.22
VAM6YDL077C KSS1P14681 368 aa1.18□□□□□ -2.22
VAM6YDL077C TPM1P17536 199 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C YJU2P28320 278 aaPredicted RBP1.18□□□□□ -2.22
VAM6YDL077C NTH2P35172 780 aa1.18□□□□□ -2.22
VAM6YDL077C YKL063CP35725 167 aa1.18□□□□□ -2.22
VAM6YDL077C OMA1P36163 345 aa1.18□□□□□ -2.22
VAM6YDL077C MRPL10P36520 322 aa1.18□□□□□ -2.22
VAM6YDL077C MRPL16P38064 232 aa1.18□□□□□ -2.22
VAM6YDL077C PSY4P38193 441 aa1.18□□□□□ -2.22
VAM6YDL077C OLA1P38219 394 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C RCK2P38623 610 aa1.18□□□□□ -2.22
VAM6YDL077C YHL012WP38709 493 aa1.18□□□□□ -2.22
VAM6YDL077C TDA3P38758 523 aa1.18□□□□□ -2.22
VAM6YDL077C YER137CP40083 148 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C MET18P40469 1032 aa1.18□□□□□ -2.22
VAM6YDL077C SYG1P40528 902 aa1.18□□□□□ -2.22
VAM6YDL077C CTK3P46963 296 aaPredicted RBP1.18□□□□□ -2.22
VAM6YDL077C YJR054WP47114 497 aa1.18□□□□□ -2.22
VAM6YDL077C BIR1P47134 954 aa1.18□□□□□ -2.22
VAM6YDL077C ENP2P48234 707 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C SHE10P53075 577 aa1.18□□□□□ -2.22
VAM6YDL077C HOS2P53096 452 aaPredicted RBP1.18□□□□□ -2.22
VAM6YDL077C BTN2P53286 410 aa1.18□□□□□ -2.22
VAM6YDL077C ALO1P54783 526 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C ULP1Q02724 621 aa1.18□□□□□ -2.22
VAM6YDL077C GYL1Q04322 720 aa1.18□□□□□ -2.22
VAM6YDL077C ATG26Q06321 1198 aa1.18□□□□□ -2.22
VAM6YDL077C VIK1Q12045 647 aa1.18□□□□□ -2.22
VAM6YDL077C ATP16Q12165 160 aa1.18□□□□□ -2.22
VAM6YDL077C APC2Q12440 853 aa1.18□□□□□ -2.22
VAM6YDL077C LSO2Q3E772 92 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C TRS33Q99394 268 aa1.18□□□□□ -2.22
VAM6YDL077C LAM4P38800 1345 aa1.18□□□□□ -2.22
VAM6YDL077C SUI3P09064 285 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C MSS116P15424 664 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C PDC5P16467 563 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C TUP1P16649 713 aa1.18□□□□□ -2.22
VAM6YDL077C SUI2P20459 304 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C YCK2P23292 546 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C IRE1P32361 1115 aa1.18□□□□□ -2.22
VAM6YDL077C MFT1P33441 392 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C SQT1P35184 431 aa1.18□□□□□ -2.22
VAM6YDL077C TTI1P36097 1038 aa1.18□□□□□ -2.22
VAM6YDL077C DBP7P36120 742 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C IFA38P38286 347 aa1.18□□□□□ -2.22
VAM6YDL077C STP2P38704 541 aa1.18□□□□□ -2.22
VAM6YDL077C TOM71P38825 639 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C SSN3P39073 555 aa1.18□□□□□ -2.22
VAM6YDL077C UBP12P39538 1254 aa1.18□□□□□ -2.22
VAM6YDL077C YIL092WP40497 633 aa1.18□□□□□ -2.22
VAM6YDL077C ROK1P45818 564 aaPredicted RBP1.18□□□□□ -2.22
VAM6YDL077C SUM1P46676 1062 aa1.18□□□□□ -2.22
VAM6YDL077C TY4A-JP47023 414 aa1.18□□□□□ -2.22
VAM6YDL077C GYP7P48365 746 aa1.18□□□□□ -2.22
VAM6YDL077C RAT1Q02792 1006 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C GDE1Q02979 1223 aa1.18□□□□□ -2.22
VAM6YDL077C YPL034WQ03083 165 aa1.18□□□□□ -2.22
VAM6YDL077C CEF1Q03654 590 aaPredicted RBP1.18□□□□□ -2.22
VAM6YDL077C HRQ1Q05549 1077 aa1.18□□□□□ -2.22
VAM6YDL077C FUS2Q05670 677 aa1.18□□□□□ -2.22
VAM6YDL077C OMS1Q06668 471 aa1.18□□□□□ -2.22
VAM6YDL077C YCG1Q06680 1035 aa1.18□□□□□ -2.22
VAM6YDL077C OPY2Q06810 360 aa1.18□□□□□ -2.22
VAM6YDL077C YLR031WQ07978 186 aa1.18□□□□□ -2.22
VAM6YDL077C PSK2Q08217 1101 aa1.18□□□□□ -2.22
VAM6YDL077C MCA1Q08601 432 aa1.18□□□□□ -2.22
VAM6YDL077C DDP1Q99321 188 aaKnown RBP1.18□□□□□ -2.22
VAM6YDL077C NUP192P47054 1683 aa1.18□□□□□ -2.22
VAM6YDL077C PMR1P13586 950 aa1.18□□□□□ -2.22
VAM6YDL077C STF2P16965 84 aa1.18□□□□□ -2.22
VAM6YDL077C TYR1P20049 452 aa1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 132.3 ms