RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 MKNK2Q9HBH9 465 aa8.99□□□□□ -0.97
SH3D19-203ENST00000409598 IFT57Q9NWB7 429 aa8.99□□□□□ -0.97
SH3D19-203ENST00000409598 RBM27Q9P2N5 1060 aaKnown RBP8.99□□□□□ -0.97
SH3D19-203ENST00000409598 PPIP5K2O43314 1243 aa8.99□□□□□ -0.97
SH3D19-203ENST00000409598 TNFAIP1Q13829 316 aa8.99□□□□□ -0.97
SH3D19-203ENST00000409598 ANKRD13DQ6ZTN6 518 aa8.99□□□□□ -0.97
SH3D19-203ENST00000409598 PICK1Q9NRD5 415 aa8.99□□□□□ -0.97
SH3D19-203ENST00000409598 MAST1Q9Y2H9 1570 aa8.99□□□□□ -0.97
SH3D19-203ENST00000409598 H3BQV1 296 aa8.99□□□□□ -0.97
SH3D19-203ENST00000409598 FKBP4Q02790 459 aaKnown RBP eCLIP8.99□□□□□ -0.97
SH3D19-203ENST00000409598 R3HDM1Q15032 1099 aaKnown RBP8.99□□□□□ -0.97
SH3D19-203ENST00000409598 IFFO2Q5TF58 517 aa8.99□□□□□ -0.97
SH3D19-203ENST00000409598 NFATC2IPQ8NCF5 419 aa8.99□□□□□ -0.97
SH3D19-203ENST00000409598 POLR3AO14802 1390 aaPredicted RBP8.99□□□□□ -0.97
SH3D19-203ENST00000409598 PLCG2P16885 1265 aa8.99□□□□□ -0.97
SH3D19-203ENST00000409598 MVPQ14764 893 aaKnown RBP8.99□□□□□ -0.97
SH3D19-203ENST00000409598 VPS72Q15906 364 aa8.99□□□□□ -0.97
SH3D19-203ENST00000409598 SIL1Q9H173 461 aa8.99□□□□□ -0.97
SH3D19-203ENST00000409598 CSPP1Q1MSJ5 1256 aa8.98□□□□□ -0.97
SH3D19-203ENST00000409598 RRP12Q5JTH9 1297 aaKnown RBP8.98□□□□□ -0.97
SH3D19-203ENST00000409598 DNAI2Q9GZS0 605 aa8.98□□□□□ -0.97
SH3D19-203ENST00000409598 IDH1O75874 414 aaKnown RBP8.98□□□□□ -0.97
SH3D19-203ENST00000409598 EN1Q05925 392 aaPredicted RBP8.98□□□□□ -0.97
SH3D19-203ENST00000409598 PIM2Q9P1W9 311 aa8.98□□□□□ -0.97
SH3D19-203ENST00000409598 ERCC6L2Q5T890 1561 aa8.98□□□□□ -0.97
SH3D19-203ENST00000409598 NKTRP30414 1462 aaKnown RBP8.98□□□□□ -0.97
SH3D19-203ENST00000409598 GGA1Q9UJY5 639 aa8.98□□□□□ -0.97
SH3D19-203ENST00000409598 ARHGEF12Q9NZN5 1544 aa8.98□□□□□ -0.97
SH3D19-203ENST00000409598 SPATA31A3Q5VYP0 1347 aa8.98□□□□□ -0.97
SH3D19-203ENST00000409598 FAM83GA6ND36 823 aa8.98□□□□□ -0.97
SH3D19-203ENST00000409598 REC8O95072 547 aa8.98□□□□□ -0.97
SH3D19-203ENST00000409598 ZNF444Q8N0Y2 327 aaPredicted RBP8.98□□□□□ -0.97
SH3D19-203ENST00000409598 DNAAF4Q8WXU2 420 aa8.98□□□□□ -0.97
SH3D19-203ENST00000409598 KIAA0232Q92628 1395 aa8.98□□□□□ -0.97
SH3D19-203ENST00000409598 TRIM21P19474 475 aaKnown RBP8.97□□□□□ -0.97
SH3D19-203ENST00000409598 BRDTQ58F21 947 aaPredicted RBP8.97□□□□□ -0.97
SH3D19-203ENST00000409598 IQCA1LA6NCM1 817 aa8.97□□□□□ -0.97
SH3D19-203ENST00000409598 UQCRFS1P1P0C7P4 283 aa8.97□□□□□ -0.97
SH3D19-203ENST00000409598 SCLT1Q96NL6 688 aa8.97□□□□□ -0.97
SH3D19-203ENST00000409598 CTNNA3Q9UI47 895 aa8.97□□□□□ -0.97
SH3D19-203ENST00000409598 SBNO1A3KN83 1393 aa8.97□□□□□ -0.97
SH3D19-203ENST00000409598 PTPRTO14522 1441 aa8.97□□□□□ -0.97
SH3D19-203ENST00000409598 EXOSC9Q06265 439 aaKnown RBP8.97□□□□□ -0.97
SH3D19-203ENST00000409598 GRIPAP1Q4V328 841 aa8.97□□□□□ -0.97
SH3D19-203ENST00000409598 SLC16A10Q8TF71 515 aa8.97□□□□□ -0.97
SH3D19-203ENST00000409598 RSPH6AQ9H0K4 717 aa8.97□□□□□ -0.97
SH3D19-203ENST00000409598 SLC5A4Q9NY91 659 aa8.97□□□□□ -0.97
SH3D19-203ENST00000409598 CSADQ9Y600 493 aa8.97□□□□□ -0.97
SH3D19-203ENST00000409598 IVNS1ABPQ9Y6Y0 642 aa8.97□□□□□ -0.97
SH3D19-203ENST00000409598 COL17A1Q9UMD9 1497 aaPredicted RBP8.97□□□□□ -0.97
SH3D19-203ENST00000409598 TMC4Q7Z404 712 aa8.97□□□□□ -0.97
SH3D19-203ENST00000409598 MPNDQ8N594 471 aa8.97□□□□□ -0.97
SH3D19-203ENST00000409598 CUL5Q93034 780 aa8.97□□□□□ -0.97
SH3D19-203ENST00000409598 TMOD4Q9NZQ9 345 aa8.97□□□□□ -0.97
SH3D19-203ENST00000409598 WDR17Q8IZU2 1322 aa8.97□□□□□ -0.97
SH3D19-203ENST00000409598 SAMD9LQ8IVG5 1584 aa8.97□□□□□ -0.97
SH3D19-203ENST00000409598 RIMBP2O15034 1052 aa8.96□□□□□ -0.97
SH3D19-203ENST00000409598 ZBTB7AO95365 584 aa8.96□□□□□ -0.97
SH3D19-203ENST00000409598 SH2D4AQ9H788 454 aa8.96□□□□□ -0.97
SH3D19-203ENST00000409598 TCOF1Q13428 1488 aaKnown RBP8.96□□□□□ -0.97
SH3D19-203ENST00000409598 ST18O60284 1047 aa8.96□□□□□ -0.97
SH3D19-203ENST00000409598 GLRX3O76003 335 aaKnown RBP8.96□□□□□ -0.97
SH3D19-203ENST00000409598 ZNF76P36508 570 aa8.96□□□□□ -0.97
SH3D19-203ENST00000409598 TPM4P67936 248 aa8.96□□□□□ -0.97
SH3D19-203ENST00000409598 PPP4R3AQ6IN85 833 aa8.96□□□□□ -0.97
SH3D19-203ENST00000409598 ANO2Q9NQ90 1003 aa8.96□□□□□ -0.97
SH3D19-203ENST00000409598 TMPOP42166 694 aaKnown RBP8.96□□□□□ -0.98
SH3D19-203ENST00000409598 CHMP4BP1P59074 171 aa8.96□□□□□ -0.98
SH3D19-203ENST00000409598 PABPC4Q13310 644 aaKnown RBP eCLIP8.96□□□□□ -0.98
SH3D19-203ENST00000409598 TTF1Q15361 905 aaPredicted RBP8.96□□□□□ -0.98
SH3D19-203ENST00000409598 TPM2P07951 284 aa8.96□□□□□ -0.98
SH3D19-203ENST00000409598 GLI2P10070 1586 aa8.96□□□□□ -0.98
SH3D19-203ENST00000409598 SRGAP3O43295 1099 aa8.96□□□□□ -0.98
SH3D19-203ENST00000409598 CCDC93Q567U6 631 aa8.96□□□□□ -0.98
SH3D19-203ENST00000409598 UBAC1Q9BSL1 405 aa8.96□□□□□ -0.98
SH3D19-203ENST00000409598 PPP1R12BO60237 982 aaPredicted RBP8.95□□□□□ -0.98
SH3D19-203ENST00000409598 SLC39A6Q13433 755 aa8.95□□□□□ -0.98
SH3D19-203ENST00000409598 EDC4Q6P2E9 1401 aaKnown RBP8.95□□□□□ -0.98
SH3D19-203ENST00000409598 UFL1O94874 794 aa8.95□□□□□ -0.98
SH3D19-203ENST00000409598 MAP3K19Q56UN5 1328 aa8.95□□□□□ -0.98
SH3D19-203ENST00000409598 RNMTO43148 476 aaKnown RBP8.95□□□□□ -0.98
SH3D19-203ENST00000409598 ARHGEF5Q12774 1597 aa8.95□□□□□ -0.98
SH3D19-203ENST00000409598 SH3TC1Q8TE82 1336 aa8.95□□□□□ -0.98
SH3D19-203ENST00000409598 PSMA5P28066 241 aa8.95□□□□□ -0.98
SH3D19-203ENST00000409598 RTKN2Q8IZC4 609 aa8.95□□□□□ -0.98
SH3D19-203ENST00000409598 MIS18AQ9NYP9 233 aa8.95□□□□□ -0.98
SH3D19-203ENST00000409598 PRKAG2Q9UGJ0 569 aa8.95□□□□□ -0.98
SH3D19-203ENST00000409598 ADAMTS8Q9UP79 889 aa8.95□□□□□ -0.98
SH3D19-203ENST00000409598 ZBED9Q6R2W3 1325 aa8.94□□□□□ -0.98
SH3D19-203ENST00000409598 LOC102724428A0A0B4J2F2 783 aa8.94□□□□□ -0.98
SH3D19-203ENST00000409598 SIK1P57059 783 aa8.94□□□□□ -0.98
SH3D19-203ENST00000409598 CCDC96Q2M329 555 aa8.94□□□□□ -0.98
SH3D19-203ENST00000409598 ARMC9Q7Z3E5 817 aa8.94□□□□□ -0.98
SH3D19-203ENST00000409598 ADGRL3Q9HAR2 1447 aa8.94□□□□□ -0.98
SH3D19-203ENST00000409598 F8W031 263 aaPredicted RBP8.94□□□□□ -0.98
SH3D19-203ENST00000409598 VSIG10Q8N0Z9 540 aa8.94□□□□□ -0.98
SH3D19-203ENST00000409598 TTLL6Q8N841 843 aa8.94□□□□□ -0.98
SH3D19-203ENST00000409598 DCAF15Q66K64 600 aa8.94□□□□□ -0.98
SH3D19-203ENST00000409598 MAP3K5Q99683 1374 aa8.93□□□□□ -0.98
SH3D19-203ENST00000409598 IRS4O14654 1257 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms