RNA–Protein interactions for RNA: ENST00000394987.4

C15orf39-202, Transcript of chromosome 15 open reading frame 39, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C15orf39, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf39-202ENST00000394987 SASS6Q6UVJ0 657 aa16.15■□□□□ 0.18
C15orf39-202ENST00000394987 PCMTD1Q96MG8 357 aaPredicted RBP16.15■□□□□ 0.18
C15orf39-202ENST00000394987 DMRT2Q9Y5R5 561 aa16.15■□□□□ 0.18
C15orf39-202ENST00000394987 BLOC1S2Q6QNY1 142 aa16.14■□□□□ 0.17
C15orf39-202ENST00000394987 EYA1Q99502 592 aa16.14■□□□□ 0.17
C15orf39-202ENST00000394987 SNRKQ9NRH2 765 aa16.14■□□□□ 0.17
C15orf39-202ENST00000394987 MAP3K2Q9Y2U5 619 aa16.14■□□□□ 0.17
C15orf39-202ENST00000394987 RBM5P52756 815 aaKnown RBP eCLIP16.14■□□□□ 0.17
C15orf39-202ENST00000394987 EFCAB6Q5THR3 1501 aa16.14■□□□□ 0.17
C15orf39-202ENST00000394987 ERVK-7P63135 1459 aa16.14■□□□□ 0.17
C15orf39-202ENST00000394987 GCP02774 474 aa16.14■□□□□ 0.17
C15orf39-202ENST00000394987 CCDC173Q0VFZ6 552 aa16.14■□□□□ 0.17
C15orf39-202ENST00000394987 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.14■□□□□ 0.17
C15orf39-202ENST00000394987 TPM3P06753 285 aa16.14■□□□□ 0.17
C15orf39-202ENST00000394987 ZNF219Q9P2Y4 722 aaPredicted RBP16.14■□□□□ 0.17
C15orf39-202ENST00000394987 NPHP3Q7Z494 1330 aa16.13■□□□□ 0.17
C15orf39-202ENST00000394987 ACSBG1Q96GR2 724 aa16.13■□□□□ 0.17
C15orf39-202ENST00000394987 RLBP1P12271 317 aa16.13■□□□□ 0.17
C15orf39-202ENST00000394987 TSPYL6Q8N831 410 aa16.13■□□□□ 0.17
C15orf39-202ENST00000394987 DDX11Q96FC9 970 aa16.13■□□□□ 0.17
C15orf39-202ENST00000394987 MEIS3Q99687 375 aa16.13■□□□□ 0.17
C15orf39-202ENST00000394987 TET3O43151 1660 aa16.13■□□□□ 0.17
C15orf39-202ENST00000394987 MTHFSDQ2M296 383 aaKnown RBP16.13■□□□□ 0.17
C15orf39-202ENST00000394987 FERMT3Q86UX7 667 aa16.13■□□□□ 0.17
C15orf39-202ENST00000394987 CCDC39Q9UFE4 941 aa16.13■□□□□ 0.17
C15orf39-202ENST00000394987 IGHMBP2P38935 993 aaKnown RBP16.12■□□□□ 0.17
C15orf39-202ENST00000394987 ERICH4A6NGS2 130 aa16.12■□□□□ 0.17
C15orf39-202ENST00000394987 TDO2P48775 406 aa16.12■□□□□ 0.17
C15orf39-202ENST00000394987 CROCC2H7BZ55 1655 aa16.12■□□□□ 0.17
C15orf39-202ENST00000394987 MYOM2P54296 1465 aa16.12■□□□□ 0.17
C15orf39-202ENST00000394987 FLT4P35916 1363 aa16.12■□□□□ 0.17
C15orf39-202ENST00000394987 UBAP1LF5GYI3 381 aa16.12■□□□□ 0.17
C15orf39-202ENST00000394987 GOLGA6L1Q8N7Z2 621 aa16.12■□□□□ 0.17
C15orf39-202ENST00000394987 BLMP54132 1417 aaPredicted RBP16.12■□□□□ 0.17
C15orf39-202ENST00000394987 IL16Q14005 1332 aa16.11■□□□□ 0.17
C15orf39-202ENST00000394987 TSR1Q2NL82 804 aaKnown RBP16.11■□□□□ 0.17
C15orf39-202ENST00000394987 NOC3LQ8WTT2 800 aaKnown RBP16.11■□□□□ 0.17
C15orf39-202ENST00000394987 XRCC6P12956 609 aaKnown RBP eCLIP16.11■□□□□ 0.17
C15orf39-202ENST00000394987 ZMYM4Q5VZL5 1548 aa16.11■□□□□ 0.17
C15orf39-202ENST00000394987 EDC4Q6P2E9 1401 aaKnown RBP16.11■□□□□ 0.17
C15orf39-202ENST00000394987 K7ELQ4 463 aaPredicted RBP16.11■□□□□ 0.17
C15orf39-202ENST00000394987 PPP1R42Q7Z4L9 355 aa16.11■□□□□ 0.17
C15orf39-202ENST00000394987 PPFIA3O75145 1194 aa16.1■□□□□ 0.17
C15orf39-202ENST00000394987 ZPR1O75312 459 aa16.1■□□□□ 0.17
C15orf39-202ENST00000394987 IFIT5Q13325 482 aaKnown RBP16.1■□□□□ 0.17
C15orf39-202ENST00000394987 LARP1BQ659C4 914 aaKnown RBP16.1■□□□□ 0.17
C15orf39-202ENST00000394987 MTERF4Q7Z6M4 381 aaKnown RBP16.1■□□□□ 0.17
C15orf39-202ENST00000394987 ZSCAN29Q8IWY8 852 aaPredicted RBP16.1■□□□□ 0.17
C15orf39-202ENST00000394987 NACAP1Q9BZK3 213 aa16.1■□□□□ 0.17
C15orf39-202ENST00000394987 CHPF2Q9P2E5 772 aa16.1■□□□□ 0.17
C15orf39-202ENST00000394987 GLRX3O76003 335 aaKnown RBP16.1■□□□□ 0.17
C15orf39-202ENST00000394987 PRPF40BQ6NWY9 871 aaKnown RBP16.1■□□□□ 0.17
C15orf39-202ENST00000394987 CCDC82Q8N4S0 544 aa16.1■□□□□ 0.17
C15orf39-202ENST00000394987 SYCE3A1L190 88 aa16.1■□□□□ 0.17
C15orf39-202ENST00000394987 PATL2C9JE40 543 aaKnown RBP16.1■□□□□ 0.17
C15orf39-202ENST00000394987 IGSF3O75054 1194 aa16.1■□□□□ 0.17
C15orf39-202ENST00000394987 DDX17Q92841 729 aaKnown RBP16.1■□□□□ 0.17
C15orf39-202ENST00000394987 PDCP20941 246 aa16.1■□□□□ 0.17
C15orf39-202ENST00000394987 CLTCL1P53675 1640 aa16.09■□□□□ 0.17
C15orf39-202ENST00000394987 ZSCAN30Q86W11 494 aa16.09■□□□□ 0.17
C15orf39-202ENST00000394987 UNC13BO14795 1591 aa16.09■□□□□ 0.17
C15orf39-202ENST00000394987 KIF1BO60333 1816 aa16.09■□□□□ 0.17
C15orf39-202ENST00000394987 IFIT1P09914 478 aaKnown RBP16.09■□□□□ 0.17
C15orf39-202ENST00000394987 CASTP20810 708 aaKnown RBP16.09■□□□□ 0.17
C15orf39-202ENST00000394987 IL13P35225 146 aa16.09■□□□□ 0.17
C15orf39-202ENST00000394987 MCM2P49736 904 aa16.09■□□□□ 0.17
C15orf39-202ENST00000394987 COPS6Q7L5N1 327 aa16.09■□□□□ 0.17
C15orf39-202ENST00000394987 TRIM5Q9C035 493 aa16.09■□□□□ 0.17
C15orf39-202ENST00000394987 PLEKHG3A1L390 1219 aa16.09■□□□□ 0.17
C15orf39-202ENST00000394987 CCDC43Q96MW1 224 aaKnown RBP16.09■□□□□ 0.17
C15orf39-202ENST00000394987 HOXC9P31274 260 aa16.08■□□□□ 0.17
C15orf39-202ENST00000394987 STK38Q15208 465 aa16.08■□□□□ 0.17
C15orf39-202ENST00000394987 MINDY4BA8MYZ0 360 aa16.08■□□□□ 0.16
C15orf39-202ENST00000394987 XBP1P17861 261 aa16.08■□□□□ 0.16
C15orf39-202ENST00000394987 NFATC2IPQ8NCF5 419 aa16.08■□□□□ 0.16
C15orf39-202ENST00000394987 HYPKQ9NX55 129 aa16.08■□□□□ 0.16
C15orf39-202ENST00000394987 ZFYVE9O95405 1425 aa16.08■□□□□ 0.16
C15orf39-202ENST00000394987 PDRG1Q9NUG6 133 aa16.08■□□□□ 0.16
C15orf39-202ENST00000394987 LDHAL6AQ6ZMR3 332 aa16.07■□□□□ 0.16
C15orf39-202ENST00000394987 XAGE3Q8WTP9 111 aa16.07■□□□□ 0.16
C15orf39-202ENST00000394987 AIDAQ96BJ3 306 aa16.07■□□□□ 0.16
C15orf39-202ENST00000394987 CIZ1Q9ULV3 898 aaPredicted RBP16.07■□□□□ 0.16
C15orf39-202ENST00000394987 SPDYE4A6NLX3 237 aa16.07■□□□□ 0.16
C15orf39-202ENST00000394987 ARHGAP31Q2M1Z3 1444 aa16.07■□□□□ 0.16
C15orf39-202ENST00000394987 ANKRD13DQ6ZTN6 518 aa16.07■□□□□ 0.16
C15orf39-202ENST00000394987 ROBO2Q9HCK4 1378 aa16.07■□□□□ 0.16
C15orf39-202ENST00000394987 RRAGDQ9NQL2 400 aaPredicted RBP16.06■□□□□ 0.16
C15orf39-202ENST00000394987 C8orf37Q96NL8 207 aa16.06■□□□□ 0.16
C15orf39-202ENST00000394987 BRMS1Q9HCU9 246 aa16.06■□□□□ 0.16
C15orf39-202ENST00000394987 KINO60870 393 aaKnown RBP16.06■□□□□ 0.16
C15orf39-202ENST00000394987 TPM1P09493 284 aa16.06■□□□□ 0.16
C15orf39-202ENST00000394987 ZCRB1Q8TBF4 217 aaKnown RBP16.06■□□□□ 0.16
C15orf39-202ENST00000394987 SIRT1Q96EB6 747 aa16.06■□□□□ 0.16
C15orf39-202ENST00000394987 CEP89Q96ST8 783 aa16.06■□□□□ 0.16
C15orf39-202ENST00000394987 WWC3Q9ULE0 1092 aa16.06■□□□□ 0.16
C15orf39-202ENST00000394987 BCORL1Q5H9F3 1711 aa16.06■□□□□ 0.16
C15orf39-202ENST00000394987 SLC3A2P08195 630 aaKnown RBP16.05■□□□□ 0.16
C15orf39-202ENST00000394987 SSFA2P28290 1259 aa16.05■□□□□ 0.16
C15orf39-202ENST00000394987 ME1P48163 572 aa16.05■□□□□ 0.16
C15orf39-202ENST00000394987 TNPO1Q92973 898 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms