RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 Gimap5Q8BWF2 308 aa13.33□□□□□ -0.27
Trim9-202ENSMUST00000110522 Vps53Q8CCB4 832 aa13.33□□□□□ -0.27
Trim9-202ENSMUST00000110522 Nucb1Q02819 459 aaKnown RBP13.33□□□□□ -0.28
Trim9-202ENSMUST00000110522 Zbtb3Q91X45 518 aa13.33□□□□□ -0.28
Trim9-202ENSMUST00000110522 Lamc1P02468 1607 aaKnown RBP13.33□□□□□ -0.28
Trim9-202ENSMUST00000110522 Nos1Q9Z0J4 1429 aa13.33□□□□□ -0.28
Trim9-202ENSMUST00000110522 Gm10093D3YYI8 482 aa13.33□□□□□ -0.28
Trim9-202ENSMUST00000110522 Mctp1E9PV86 951 aa13.33□□□□□ -0.28
Trim9-202ENSMUST00000110522 Hdac1O09106 482 aaKnown RBP13.33□□□□□ -0.28
Trim9-202ENSMUST00000110522 Krt85Q9Z2T6 507 aa13.33□□□□□ -0.28
Trim9-202ENSMUST00000110522 Cul7Q8VE73 1689 aa13.33□□□□□ -0.28
Trim9-202ENSMUST00000110522 Nip7Q9CXK8 180 aaKnown RBP13.33□□□□□ -0.28
Trim9-202ENSMUST00000110522 TnmdQ9EP64 317 aa13.33□□□□□ -0.28
Trim9-202ENSMUST00000110522 Exoc5Q3TPX4 708 aa13.32□□□□□ -0.28
Trim9-202ENSMUST00000110522 Slx4ipQ9D7Y9 413 aa13.32□□□□□ -0.28
Trim9-202ENSMUST00000110522 Ccdc173A0JLY1 547 aa13.32□□□□□ -0.28
Trim9-202ENSMUST00000110522 Hap1O35668 628 aa13.32□□□□□ -0.28
Trim9-202ENSMUST00000110522 Ier5O89113 308 aa13.32□□□□□ -0.28
Trim9-202ENSMUST00000110522 Tnni2P13412 182 aa13.32□□□□□ -0.28
Trim9-202ENSMUST00000110522 Ppp6r1Q7TSI3 856 aa13.32□□□□□ -0.28
Trim9-202ENSMUST00000110522 Slc35g1Q8BY79 368 aa13.32□□□□□ -0.28
Trim9-202ENSMUST00000110522 Cwc25Q9DBF7 416 aa13.32□□□□□ -0.28
Trim9-202ENSMUST00000110522 Txnrd1Q9JMH6 613 aa13.32□□□□□ -0.28
Trim9-202ENSMUST00000110522 Col17a1Q07563 1470 aa13.32□□□□□ -0.28
Trim9-202ENSMUST00000110522 Kif21bQ9QXL1 1668 aa13.32□□□□□ -0.28
Trim9-202ENSMUST00000110522 Ehmt1Q5DW34 1296 aa13.32□□□□□ -0.28
Trim9-202ENSMUST00000110522 Mcm3P25206 812 aaKnown RBP13.31□□□□□ -0.28
Trim9-202ENSMUST00000110522 Hand2Q61039 217 aa13.31□□□□□ -0.28
Trim9-202ENSMUST00000110522 Slf2Q6P9P0 1278 aa13.31□□□□□ -0.28
Trim9-202ENSMUST00000110522 Tubb6Q922F4 447 aa13.31□□□□□ -0.28
Trim9-202ENSMUST00000110522 Uhrf1bp1lA2RSJ4 1457 aa13.31□□□□□ -0.28
Trim9-202ENSMUST00000110522 Cct2P80314 535 aaKnown RBP13.31□□□□□ -0.28
Trim9-202ENSMUST00000110522 Tmem87bQ8BKU8 555 aa13.31□□□□□ -0.28
Trim9-202ENSMUST00000110522 Nup88Q8CEC0 753 aaKnown RBP13.31□□□□□ -0.28
Trim9-202ENSMUST00000110522 Aldh1l2Q8K009 923 aa13.31□□□□□ -0.28
Trim9-202ENSMUST00000110522 Klc3Q91W40 508 aa13.31□□□□□ -0.28
Trim9-202ENSMUST00000110522 Zbtb21E9Q444 1094 aa13.31□□□□□ -0.28
Trim9-202ENSMUST00000110522 Ppfia1B2RXQ2 1266 aa13.31□□□□□ -0.28
Trim9-202ENSMUST00000110522 Bicc1Q99MQ1 977 aaKnown RBP13.31□□□□□ -0.28
Trim9-202ENSMUST00000110522 Hmgn5Q9JL35 406 aa13.31□□□□□ -0.28
Trim9-202ENSMUST00000110522 Kif3aP28741 701 aa13.3□□□□□ -0.28
Trim9-202ENSMUST00000110522 AnkarA2RT91 1465 aa13.3□□□□□ -0.28
Trim9-202ENSMUST00000110522 Uggt2E9Q4X2 1504 aa13.3□□□□□ -0.28
Trim9-202ENSMUST00000110522 CrklP47941 303 aa13.3□□□□□ -0.28
Trim9-202ENSMUST00000110522 RestQ8VIG1 1082 aa13.3□□□□□ -0.28
Trim9-202ENSMUST00000110522 Ccdc66Q6NS45 935 aa13.3□□□□□ -0.28
Trim9-202ENSMUST00000110522 Drc7Q6V3W6 876 aa13.3□□□□□ -0.28
Trim9-202ENSMUST00000110522 Kri1Q8VDQ9 704 aaKnown RBP13.3□□□□□ -0.28
Trim9-202ENSMUST00000110522 Nsfl1cQ9CZ44 370 aaKnown RBP13.3□□□□□ -0.28
Trim9-202ENSMUST00000110522 Rbbp8nlA2ABX0 614 aa13.29□□□□□ -0.28
Trim9-202ENSMUST00000110522 LlphQ9D945 130 aaKnown RBP13.29□□□□□ -0.28
Trim9-202ENSMUST00000110522 Ercc3P49135 783 aa13.29□□□□□ -0.28
Trim9-202ENSMUST00000110522 Isy1Q69ZQ2 285 aaKnown RBP13.29□□□□□ -0.28
Trim9-202ENSMUST00000110522 Trim29Q8R2Q0 587 aa13.29□□□□□ -0.28
Trim9-202ENSMUST00000110522 Cyp7a1Q64505 503 aa13.28□□□□□ -0.28
Trim9-202ENSMUST00000110522 Cfap69Q8BH53 942 aa13.28□□□□□ -0.28
Trim9-202ENSMUST00000110522 Phf14Q9D4H9 881 aa13.28□□□□□ -0.28
Trim9-202ENSMUST00000110522 Tpm3P21107 285 aaKnown RBP13.28□□□□□ -0.28
Trim9-202ENSMUST00000110522 SympkQ80X82 1284 aa13.28□□□□□ -0.28
Trim9-202ENSMUST00000110522 Krt84Q99M73 603 aa13.28□□□□□ -0.28
Trim9-202ENSMUST00000110522 LratQ9JI60 231 aa13.28□□□□□ -0.28
Trim9-202ENSMUST00000110522 Paxip1Q6NZQ4 1056 aa13.28□□□□□ -0.28
Trim9-202ENSMUST00000110522 ZwintQ9CQU5 252 aa13.28□□□□□ -0.28
Trim9-202ENSMUST00000110522 Rbm8a2A0A0N4SUH6 174 aa13.27□□□□□ -0.28
Trim9-202ENSMUST00000110522 Mmp8O70138 465 aa13.27□□□□□ -0.28
Trim9-202ENSMUST00000110522 SfswapQ3USH5 945 aaKnown RBP13.27□□□□□ -0.28
Trim9-202ENSMUST00000110522 ImmtQ8CAQ8 757 aaKnown RBP13.27□□□□□ -0.28
Trim9-202ENSMUST00000110522 Rufy2Q8R4C2 606 aa13.27□□□□□ -0.28
Trim9-202ENSMUST00000110522 Rbm8aQ9CWZ3 174 aa13.27□□□□□ -0.28
Trim9-202ENSMUST00000110522 UvssaQ9D479 717 aa13.27□□□□□ -0.28
Trim9-202ENSMUST00000110522 Atg4a-psA0A0G2JFS9 396 aa13.27□□□□□ -0.28
Trim9-202ENSMUST00000110522 Prpf4bQ61136 1007 aaKnown RBP13.27□□□□□ -0.28
Trim9-202ENSMUST00000110522 Atg4aQ8C9S8 396 aa13.27□□□□□ -0.28
Trim9-202ENSMUST00000110522 Dmrt2Q8BG36 561 aa13.27□□□□□ -0.29
Trim9-202ENSMUST00000110522 Stx6Q9JKK1 255 aa13.27□□□□□ -0.29
Trim9-202ENSMUST00000110522 Calcoco2A2A6M5 331 aa13.27□□□□□ -0.29
Trim9-202ENSMUST00000110522 EzrP26040 586 aaKnown RBP13.27□□□□□ -0.29
Trim9-202ENSMUST00000110522 Ifit1bl2Q3U687 466 aa13.27□□□□□ -0.29
Trim9-202ENSMUST00000110522 Ptcd1Q8C2E4 695 aaKnown RBP13.27□□□□□ -0.29
Trim9-202ENSMUST00000110522 Ddx19aQ61655 478 aaKnown RBP13.26□□□□□ -0.29
Trim9-202ENSMUST00000110522 Edc3Q8K2D3 508 aaKnown RBP13.26□□□□□ -0.29
Trim9-202ENSMUST00000110522 Atf7Q8R0S1 413 aa13.26□□□□□ -0.29
Trim9-202ENSMUST00000110522 Cep170Q6A065 1588 aa13.26□□□□□ -0.29
Trim9-202ENSMUST00000110522 Tpx2A2APB8 745 aaKnown RBP13.26□□□□□ -0.29
Trim9-202ENSMUST00000110522 Pde4dQ01063 747 aa13.26□□□□□ -0.29
Trim9-202ENSMUST00000110522 Pdcl3Q8BVF2 240 aa13.26□□□□□ -0.29
Trim9-202ENSMUST00000110522 NapbP28663 298 aa13.25□□□□□ -0.29
Trim9-202ENSMUST00000110522 Tpm1P58771 284 aa13.25□□□□□ -0.29
Trim9-202ENSMUST00000110522 Kiaa0753Q6A000 959 aa13.25□□□□□ -0.29
Trim9-202ENSMUST00000110522 Cep55Q8BT07 462 aa13.25□□□□□ -0.29
Trim9-202ENSMUST00000110522 Smc2Q8CG48 1191 aaKnown RBP13.25□□□□□ -0.29
Trim9-202ENSMUST00000110522 Gdpd2Q9ESM6 539 aa13.25□□□□□ -0.29
Trim9-202ENSMUST00000110522 Gas2l3Q3UWW6 683 aa13.25□□□□□ -0.29
Trim9-202ENSMUST00000110522 Med4Q9CQA5 270 aa13.25□□□□□ -0.29
Trim9-202ENSMUST00000110522 Adgrl1Q80TR1 1466 aa13.25□□□□□ -0.29
Trim9-202ENSMUST00000110522 NmiO35309 314 aa13.25□□□□□ -0.29
Trim9-202ENSMUST00000110522 Mdm2P23804 489 aa13.25□□□□□ -0.29
Trim9-202ENSMUST00000110522 A0A0U1RNP2 1173 aa13.25□□□□□ -0.29
Trim9-202ENSMUST00000110522 Cdc45Q9Z1X9 566 aa13.25□□□□□ -0.29
Trim9-202ENSMUST00000110522 Krt25Q8VCW2 446 aa13.24□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms