Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Gm25239-201ENSMUST00000174915 86 ntBASIC43.42■■■■■ 4.54
Atf7Q8R0S1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40.82■■■■■ 4.13
Atf7Q8R0S1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.83■■■■□ 3.97
Atf7Q8R0S1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39.7■■■■□ 3.95
Atf7Q8R0S1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39.45■■■■□ 3.91
Atf7Q8R0S1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
Atf7Q8R0S1 Gm15042-201ENSMUST00000120212 883 ntBASIC38.59■■■■□ 3.77
Atf7Q8R0S1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
Atf7Q8R0S1 Psd-208ENSMUST00000224556 2034 ntBASIC37.95■■■■□ 3.67
Atf7Q8R0S1 Gm15045-201ENSMUST00000117359 883 ntBASIC37.88■■■■□ 3.65
Atf7Q8R0S1 Gm24109-201ENSMUST00000175489 103 ntBASIC37.35■■■■□ 3.57
Atf7Q8R0S1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37.3■■■■□ 3.56
Atf7Q8R0S1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37.21■■■■□ 3.55
Atf7Q8R0S1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
Atf7Q8R0S1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
Atf7Q8R0S1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.6■■■■□ 3.45
Atf7Q8R0S1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Atf7Q8R0S1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
Atf7Q8R0S1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36.49■■■■□ 3.43
Atf7Q8R0S1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.47■■■■□ 3.43
Atf7Q8R0S1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
Atf7Q8R0S1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC36.4■■■■□ 3.42
Atf7Q8R0S1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
Atf7Q8R0S1 Gm23366-201ENSMUST00000175022 89 ntBASIC36.35■■■■□ 3.41
Atf7Q8R0S1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Atf7Q8R0S1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC36.27■■■■□ 3.4
Atf7Q8R0S1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC36.24■■■■□ 3.39
Atf7Q8R0S1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.15■■■■□ 3.38
Atf7Q8R0S1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Atf7Q8R0S1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Atf7Q8R0S1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
Atf7Q8R0S1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
Atf7Q8R0S1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC35.85■■■■□ 3.33
Atf7Q8R0S1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.81■■■■□ 3.32
Atf7Q8R0S1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
Atf7Q8R0S1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
Atf7Q8R0S1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.5■■■■□ 3.27
Atf7Q8R0S1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.43■■■■□ 3.26
Atf7Q8R0S1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35.37■■■■□ 3.25
Atf7Q8R0S1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
Atf7Q8R0S1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35.22■■■■□ 3.23
Atf7Q8R0S1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35.2■■■■□ 3.23
Atf7Q8R0S1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Atf7Q8R0S1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34.92■■■■□ 3.18
Atf7Q8R0S1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Atf7Q8R0S1 Gm10524-201ENSMUST00000181931 1893 ntBASIC34.86■■■■□ 3.17
Atf7Q8R0S1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34.82■■■■□ 3.17
Atf7Q8R0S1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Atf7Q8R0S1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC34.55■■■■□ 3.12
Atf7Q8R0S1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
Atf7Q8R0S1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
Atf7Q8R0S1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.48■■■■□ 3.11
Atf7Q8R0S1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Atf7Q8R0S1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Atf7Q8R0S1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Atf7Q8R0S1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Atf7Q8R0S1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.18■■■■□ 3.06
Atf7Q8R0S1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
Atf7Q8R0S1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34.14■■■■□ 3.06
Atf7Q8R0S1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Atf7Q8R0S1 Gm25238-201ENSMUST00000174914 89 ntBASIC34.07■■■■□ 3.04
Atf7Q8R0S1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC34.05■■■■□ 3.04
Atf7Q8R0S1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.05■■■■□ 3.04
Atf7Q8R0S1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC34.04■■■■□ 3.04
Atf7Q8R0S1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34.02■■■■□ 3.04
Atf7Q8R0S1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34.02■■■■□ 3.04
Atf7Q8R0S1 Gm42596-201ENSMUST00000196305 1958 ntBASIC34■■■■□ 3.03
Atf7Q8R0S1 Gm27325-201ENSMUST00000175467 74 ntBASIC33.96■■■■□ 3.03
Atf7Q8R0S1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.95■■■■□ 3.03
Atf7Q8R0S1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.92■■■■□ 3.02
Atf7Q8R0S1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33.81■■■■□ 3
Atf7Q8R0S1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Atf7Q8R0S1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Atf7Q8R0S1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.68■■■□□ 2.98
Atf7Q8R0S1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Atf7Q8R0S1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Atf7Q8R0S1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Atf7Q8R0S1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Atf7Q8R0S1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.45■■■□□ 2.95
Atf7Q8R0S1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33.45■■■□□ 2.95
Atf7Q8R0S1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Atf7Q8R0S1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Atf7Q8R0S1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC33.42■■■□□ 2.94
Atf7Q8R0S1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Atf7Q8R0S1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
Atf7Q8R0S1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Atf7Q8R0S1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Atf7Q8R0S1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Atf7Q8R0S1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.25■■■□□ 2.91
Atf7Q8R0S1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
Atf7Q8R0S1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.19■■■□□ 2.9
Atf7Q8R0S1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.15■■■□□ 2.9
Atf7Q8R0S1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Atf7Q8R0S1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Atf7Q8R0S1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Atf7Q8R0S1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Atf7Q8R0S1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC33.05■■■□□ 2.88
Atf7Q8R0S1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Atf7Q8R0S1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33■■■□□ 2.87
Atf7Q8R0S1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33■■■□□ 2.87
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms