RNA–Protein interactions for RNA: ENSMUST00000029838.10

Rpf1-201, Transcript of Ribosome production factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rpf1, Length 1,661 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-201ENSMUST00000029838 Ankrd23Q812A3 306 aa21.09■□□□□ 0.97
Rpf1-201ENSMUST00000029838 PigbQ9JJQ0 542 aa21.09■□□□□ 0.97
Rpf1-201ENSMUST00000029838 Smg7Q5RJH6 1138 aaKnown RBP21.09■□□□□ 0.97
Rpf1-201ENSMUST00000029838 Ppp1r42Q8R1Z4 357 aa21.09■□□□□ 0.97
Rpf1-201ENSMUST00000029838 Nphp1Q9QY53 687 aa21.09■□□□□ 0.97
Rpf1-201ENSMUST00000029838 Crb1Q8VHS2 1405 aa21.08■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Zap70P43404 618 aa21.08■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Tceal9Q9DD24 104 aa21.08■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Egfem1Q8C088 590 aa21.07■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Tmc1Q8R4P5 757 aa21.07■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Mylk2Q8VCR8 613 aa21.07■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Ccdc129Q14B48 1034 aa21.06■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Bicc1Q99MQ1 977 aaKnown RBP21.06■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Ak7Q9D2H2 614 aa21.06■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Cwc27Q3TKY6 469 aa21.05■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Sf3b2Q3UJB0 878 aaKnown RBP21.05■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Trim52Q8CDV4 233 aa21.05■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Ipo9Q91YE6 1041 aa21.04■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Ddb1Q3U1J4 1140 aaKnown RBP21.03■□□□□ 0.96
Rpf1-201ENSMUST00000029838 FanclQ9CR14 375 aa21.03■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Wdr63B2RY71 923 aa21.02■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Mmp8O70138 465 aa21.02■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Ddx58Q6Q899 926 aa21.02■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Jmjd4Q8BFT6 427 aa21.02■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Psrc1Q9D0P7 329 aa21.02■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Hdac6Q9Z2V5 1149 aa21.02■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Shank2Q80Z38 1476 aa21.02■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Lrp6O88572 1613 aa21.02■□□□□ 0.96
Rpf1-201ENSMUST00000029838 Pde4dQ01063 747 aa21.02■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Tjp1P39447 1745 aaKnown RBP21.01■□□□□ 0.95
Rpf1-201ENSMUST00000029838 InhbeO08717 350 aa21.01■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Ier5O89113 308 aa21.01■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Grm8P47743 908 aa21.01■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Gm12185Q5NCB2 835 aa21.01■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Ppm1gQ61074 542 aa21.01■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Slc39a6Q8C145 765 aa21.01■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Cog6Q8R3I3 657 aa21.01■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Mcmdc2E9Q956 681 aa21■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Ccdc146E9Q9F7 977 aa21■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Gnl3lQ6PGG6 577 aaKnown RBP21■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Ppm1mQ8BU27 406 aa21■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Cyp46a1Q9WVK8 500 aa21■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Map3k13Q1HKZ5 959 aa20.99■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Fer1l6E0CZ42 1862 aa20.99■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Hsp90ab1P11499 724 aaKnown RBP20.99■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Ttll7A4Q9F0 912 aa20.98■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Pnmal2G3X9N3 661 aa20.98■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Cap2Q9CYT6 476 aa20.98■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Lmbr1lQ9D1E5 489 aa20.98■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Zbtb40Q6PCS8 1258 aa20.97■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Ddx60E9PZQ1 1711 aa20.97■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Atg4a-psA0A0G2JFS9 396 aa20.96■□□□□ 0.95
Rpf1-201ENSMUST00000029838 VgfQ0VGU4 617 aa20.96■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Slc4a10Q5DTL9 1118 aa20.96■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Atg4aQ8C9S8 396 aa20.96■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Nwd2Q6P5U7 1742 aa20.96■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Smarca5Q91ZW3 1051 aaKnown RBP20.96■□□□□ 0.95
Rpf1-201ENSMUST00000029838 Fkbp5Q64378 456 aa20.95■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Dcaf5Q80T85 946 aa20.95■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Cacna1sQ02789 1880 aa20.95■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Igfbp6P47880 238 aa20.94■□□□□ 0.94
Rpf1-201ENSMUST00000029838 MypnQ5DTJ9 1315 aa20.93■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Cct4P80315 539 aaKnown RBP20.93■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Shank3Q4ACU6 1730 aa20.93■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Tbc1d32Q3URV1 1296 aa20.93■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Stard3nlQ9DCI3 235 aa20.93■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Nav1Q8CH77 1875 aa20.92■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Syde2E9PUP1 1314 aa20.92■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Prr29B1ARI9 187 aa20.92■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Gigyf1Q99MR1 1044 aaKnown RBP20.92■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Zkscan2G3X952 960 aa20.91■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Tlr7P58681 1050 aa20.91■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Ripor2Q80U16 1078 aa20.91■□□□□ 0.94
Rpf1-201ENSMUST00000029838 CenppQ9CZ92 286 aa20.91■□□□□ 0.94
Rpf1-201ENSMUST00000029838 AbraQ8BUZ1 375 aa20.9■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Mast2Q60592 1734 aa20.9■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Anapc15-psA0A140T8L6 141 aa20.89■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Mfap1aC0HKD8 439 aaKnown RBP20.89■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Mfap1bC0HKD9 439 aaKnown RBP20.89■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Gnat3Q3V3I2 354 aa20.89■□□□□ 0.94
Rpf1-201ENSMUST00000029838 Soga3Q6NZL0 945 aa20.89■□□□□ 0.93
Rpf1-201ENSMUST00000029838 DiexfQ8BTT6 772 aaKnown RBP20.89■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Smc4Q8CG47 1286 aa20.89■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Nek4Q9Z1J2 792 aa20.89■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Tgfb1i1Q62219 461 aa20.88■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Eno4Q8C042 619 aa20.88■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Klc3Q91W40 508 aa20.88■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Cwc25Q9DBF7 416 aa20.88■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Ehd4Q9EQP2 541 aa20.88■□□□□ 0.93
Rpf1-201ENSMUST00000029838 CanxP35564 591 aaKnown RBP20.87■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Rps6ka4Q9Z2B9 773 aa20.87■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Tnrc6cQ3UHC0 1690 aaKnown RBP20.86■□□□□ 0.93
Rpf1-201ENSMUST00000029838 MetP16056 1379 aa20.86■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Sema6bO54951 886 aa20.86■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Tmem87bQ8BKU8 555 aa20.86■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Dnai1Q8C0M8 701 aa20.86■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Nip7Q9CXK8 180 aaKnown RBP20.86■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Rabep1O35551 862 aa20.85■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Myd88P22366 296 aa20.85■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Tbc1d9Q3UYK3 1264 aa20.85■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms