RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR43, Length 209 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR43	snR43	STB3	Q12427	513 aa		3.21	□□□□□ -1.9
snR43	snR43	TY3A-I	Q99219	290 aa		3.21	□□□□□ -1.9
snR43	snR43	TOR1	P35169	2470 aa		3.2	□□□□□ -1.9
snR43	snR43	CCP1	P00431	361 aa		3.2	□□□□□ -1.9
snR43	snR43	FUR4	P05316	633 aa	Known RBP	3.2	□□□□□ -1.9
snR43	snR43	SNF3	P10870	884 aa		3.2	□□□□□ -1.9
snR43	snR43	MCM1	P11746	286 aa		3.2	□□□□□ -1.9
snR43	snR43	VMA3	P25515	160 aa		3.2	□□□□□ -1.9
snR43	snR43	CDC60	P26637	1090 aa	Known RBP	3.2	□□□□□ -1.9
snR43	snR43	TRK2	P28584	889 aa		3.2	□□□□□ -1.9
snR43	snR43	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	not detected
snR43	snR43	OCT1	P35999	772 aa		3.2	□□□□□ -1.9
snR43	snR43	GRS1	P38088	690 aa	Known RBP	3.2	□□□□□ -1.9
snR43	snR43	GLO3	P38682	493 aa	Known RBP	3.2	□□□□□ -1.9
snR43	snR43	QDR2	P40474	542 aa		3.2	□□□□□ -1.9
snR43	snR43	YFL040W	P43562	540 aa		3.2	□□□□□ -1.9
snR43	snR43	VTC4	P47075	721 aa		3.2	□□□□□ -1.9
snR43	snR43	UBP15	P50101	1230 aa		3.2	□□□□□ -1.9
snR43	snR43	ATG1	P53104	897 aa		3.2	□□□□□ -1.9
snR43	snR43	YGR035C	P53222	116 aa		3.2	□□□□□ -1.9
snR43	snR43	HEF3	P53978	1044 aa	Known RBP	3.2	□□□□□ -1.9
snR43	snR43	FMP30	Q02883	468 aa		3.2	□□□□□ -1.9
snR43	snR43	TY1A-MR1	Q04215	440 aa		3.2	□□□□□ -1.9
snR43	snR43	HPF1	Q05164	967 aa		3.2	□□□□□ -1.9
snR43	snR43	CFT2	Q12102	859 aa	Predicted RBP	3.2	□□□□□ -1.9
snR43	snR43	YBL113C	Q7M4S9	792 aa		3.2	□□□□□ -1.9
snR43	snR43	TUS1	Q06412	1307 aa		3.19	□□□□□ -1.9
snR43	snR43	YMR084W	A2P2R3	262 aa		3.19	□□□□□ -1.9
snR43	snR43	PMA1	P05030	918 aa	Known RBP	3.19	□□□□□ -1.9
snR43	snR43	MRPL33	P20084	86 aa		3.19	□□□□□ -1.9
snR43	snR43	ADP1	P25371	1049 aa		3.19	□□□□□ -1.9
snR43	snR43	RPT3	P33298	428 aa	Known RBP	3.19	□□□□□ -1.9
snR43	snR43	ERP5	P38819	212 aa		3.19	□□□□□ -1.9
snR43	snR43	UBP12	P39538	1254 aa		3.19	□□□□□ -1.9
snR43	snR43	MXR1	P40029	184 aa		3.19	□□□□□ -1.9
snR43	snR43	YTA6	P40328	754 aa		3.19	□□□□□ -1.9
snR43	snR43	CUZ1	P53899	274 aa		3.19	□□□□□ -1.9
snR43	snR43	YPL034W	Q03083	165 aa		3.19	□□□□□ -1.9
snR43	snR43	RRN6	P32786	894 aa		3.18	□□□□□ -1.9
snR43	snR43	ACA1	P39970	489 aa		3.18	□□□□□ -1.9
snR43	snR43	VAB2	P40003	282 aa		3.18	□□□□□ -1.9
snR43	snR43	QDR1	P40475	563 aa		3.18	□□□□□ -1.9
snR43	snR43	MSH4	P40965	878 aa	Predicted RBP	3.18	□□□□□ -1.9
snR43	snR43	LYS14	P40971	790 aa		3.18	□□□□□ -1.9
snR43	snR43	NOP2	P40991	618 aa	Known RBP	3.18	□□□□□ -1.9
snR43	snR43	KRE33	P53914	1056 aa	Known RBP	3.18	□□□□□ -1.9
snR43	snR43	YMR265C	Q03508	461 aa	Known RBP	3.18	□□□□□ -1.9
snR43	snR43	PCL8	Q08966	492 aa		3.18	□□□□□ -1.9
snR43	snR43	SNU66	Q12420	587 aa	Predicted RBP	3.18	□□□□□ -1.9
snR43	snR43	YDR034W-B	Q6Q5X2	51 aa		3.18	□□□□□ -1.9
snR43	snR43	TUB2	P02557	457 aa	Known RBP	3.17	□□□□□ -1.9
snR43	snR43	LEU1	P07264	779 aa	Known RBP	3.17	□□□□□ -1.9
snR43	snR43	KTR2	P33550	425 aa		3.17	□□□□□ -1.9
snR43	snR43	SCD5	P34758	872 aa		3.17	□□□□□ -1.9
snR43	snR43	MCD4	P36051	919 aa		3.17	□□□□□ -1.9
snR43	snR43	UIP5	P36137	443 aa		3.17	□□□□□ -1.9
snR43	snR43	AFG3	P39925	761 aa		3.17	□□□□□ -1.9
snR43	snR43	MPP10	P47083	593 aa	Known RBP	3.17	□□□□□ -1.9
snR43	snR43	SNU71	P53207	620 aa	Known RBP	3.17	□□□□□ -1.9
snR43	snR43	YGR122W	P53272	402 aa		3.17	□□□□□ -1.9
snR43	snR43	YNR040W	P53736	256 aa		3.17	□□□□□ -1.9
snR43	snR43	ADE12	P80210	433 aa	Known RBP	3.17	□□□□□ -1.9
snR43	snR43	SUT2	Q12286	268 aa		3.17	□□□□□ -1.9
snR43	snR43	MDM20	Q12387	796 aa	Known RBP	3.17	□□□□□ -1.9
snR43	snR43	RGP1	P16664	663 aa		3.16	□□□□□ -1.9
snR43	snR43	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
snR43	snR43	PER1	P25625	357 aa		3.16	□□□□□ -1.9
snR43	snR43	SWC3	P31376	625 aa		3.16	□□□□□ -1.9
snR43	snR43	KAP122	P32767	1081 aa		3.16	□□□□□ -1.9
snR43	snR43	PTK1	P36002	662 aa	Predicted RBP	3.16	□□□□□ -1.9
snR43	snR43	YBL028C	P38202	106 aa		3.16	□□□□□ -1.9
snR43	snR43	MSC7	P38694	644 aa		3.16	□□□□□ -1.9
snR43	snR43	NSG2	P53898	299 aa		3.16	□□□□□ -1.9
snR43	snR43	CUS1	Q02554	436 aa	Predicted RBP	3.16	□□□□□ -1.9
snR43	snR43	YML020W	Q03722	664 aa		3.16	□□□□□ -1.9
snR43	snR43	AHC1	Q12433	566 aa		3.16	□□□□□ -1.9
snR43	snR43	YOR131C	Q12486	218 aa		3.16	□□□□□ -1.9
snR43	snR43	PIF1	P07271	859 aa		3.15	□□□□□ -1.91
snR43	snR43	TRL1	P09880	827 aa	Known RBP	3.15	□□□□□ -1.91
snR43	snR43	DIT1	P21623	536 aa		3.15	□□□□□ -1.91
snR43	snR43	MSN1	P22148	382 aa		3.15	□□□□□ -1.91
snR43	snR43	EUG1	P32474	517 aa		3.15	□□□□□ -1.91
snR43	snR43	RAD24	P32641	659 aa		3.15	□□□□□ -1.91
snR43	snR43	KSP1	P38691	1029 aa	Known RBP	3.15	□□□□□ -1.91
snR43	snR43	TIF4631	P39935	952 aa	Known RBP	3.15	□□□□□ -1.91
snR43	snR43	BOI2	P39969	1040 aa		3.15	□□□□□ -1.91
snR43	snR43	YIR042C	P40586	236 aa		3.15	□□□□□ -1.91
snR43	snR43	MDJ2	P42834	146 aa		3.15	□□□□□ -1.91
snR43	snR43	UBX5	Q06682	500 aa		3.15	□□□□□ -1.91
snR43	snR43	MET7	Q08645	548 aa		3.15	□□□□□ -1.91
snR43	snR43	LSO1	Q3E827	93 aa		3.15	□□□□□ -1.91
snR43	snR43	CYB2	P00175	591 aa		3.14	□□□□□ -1.91
snR43	snR43	SEC18	P18759	758 aa	Known RBP	3.14	□□□□□ -1.91
snR43	snR43	BCS1	P32839	456 aa		3.14	□□□□□ -1.91
snR43	snR43	RGT1	P32862	1170 aa		3.14	□□□□□ -1.91
snR43	snR43	SSF1	P38789	453 aa	Predicted RBP	3.14	□□□□□ -1.91
snR43	snR43	YHR131C	P38835	850 aa		3.14	□□□□□ -1.91
snR43	snR43	CEM1	P39525	442 aa		3.14	□□□□□ -1.91
snR43	snR43	GPB2	P39717	880 aa		3.14	□□□□□ -1.91
snR43	snR43	YJR107W	P47145	328 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms