RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 ARL1P38116 183 aaKnown RBP-0.18□□□□□ -2.44
snR40snR40 RCL1Q08096 367 aaPredicted RBP-0.18□□□□□ -2.44
snR40snR40 OSW1Q08692 278 aa-0.18□□□□□ -2.44
snR40snR40 PGK1P00560 416 aaKnown RBP-0.19□□□□□ -2.44
snR40snR40 PHO2P07269 559 aa-0.19□□□□□ -2.44
snR40snR40 SPO11P23179 398 aa-0.19□□□□□ -2.44
snR40snR40 YSC84P32793 468 aa-0.19□□□□□ -2.44
snR40snR40 PXL1P36166 706 aa-0.19□□□□□ -2.44
snR40snR40 PCA1P38360 1216 aa-0.19□□□□□ -2.44
snR40snR40 YAT2P40017 923 aa-0.19□□□□□ -2.44
snR40snR40 CHA4P43634 648 aa-0.19□□□□□ -2.44
snR40snR40 YJL045WP47052 634 aa-0.19□□□□□ -2.44
snR40snR40 HIS5P07172 385 aa-0.2□□□□□ -2.44
snR40snR40 GEF1P37020 779 aa-0.2□□□□□ -2.44
snR40snR40 MET12P46151 657 aa-0.2□□□□□ -2.44
snR40snR40 STP1Q00947 519 aa-0.2□□□□□ -2.44
snR40snR40 SIZ1Q04195 904 aa-0.2□□□□□ -2.44
snR40snR40 CSR2Q12734 1121 aa-0.2□□□□□ -2.44
snR40snR40 KIN3P22209 435 aa-0.21□□□□□ -2.44
snR40snR40 FIR1P40020 876 aa-0.21□□□□□ -2.44
snR40snR40 RGD2P43556 714 aa-0.21□□□□□ -2.44
snR40snR40 LSC1P53598 329 aaKnown RBP-0.21□□□□□ -2.44
snR40snR40 RSA3Q05942 220 aaKnown RBP-0.21□□□□□ -2.44
snR40snR40 ADY3Q07732 790 aa-0.21□□□□□ -2.44
snR40snR40 TRM13Q12383 476 aa-0.21□□□□□ -2.44
snR40snR40 COQ4O13525 335 aa-0.22□□□□□ -2.44
snR40snR40 TRP4P07285 380 aaPredicted RBP-0.22□□□□□ -2.44
snR40snR40 PRP5P21372 849 aaPredicted RBP-0.22□□□□□ -2.44
snR40snR40 NPR1P22211 790 aa-0.22□□□□□ -2.44
snR40snR40 BAP2P38084 609 aa-0.22□□□□□ -2.44
snR40snR40 PPS1P38148 807 aa-0.22□□□□□ -2.44
snR40snR40 RFC5P38251 354 aa-0.22□□□□□ -2.44
snR40snR40 CCZ1P38273 704 aa-0.22□□□□□ -2.44
snR40snR40 ARC40P38328 384 aaKnown RBP-0.22□□□□□ -2.44
snR40snR40 DAS1P47005 663 aa-0.22□□□□□ -2.44
snR40snR40 IGO1P53897 168 aa-0.22□□□□□ -2.44
snR40snR40 TPO1Q07824 586 aa-0.22□□□□□ -2.44
snR40snR40 RSB1Q08417 382 aa-0.22□□□□□ -2.44
snR40snR40 RIM11P38615 370 aa-0.23□□□□□ -2.45
snR40snR40 YAR028WP39548 234 aa-0.23□□□□□ -2.45
snR40snR40 AZF1P41696 914 aa-0.23□□□□□ -2.45
snR40snR40 FOX2Q02207 900 aaKnown RBP-0.23□□□□□ -2.45
snR40snR40 CMR1Q12510 522 aaKnown RBP-0.23□□□□□ -2.45
snR40snR40 TUB3P09734 445 aaKnown RBP-0.24□□□□□ -2.45
snR40snR40 TY1A-LR4P0C2I8 440 aaKnown RBP-0.24□□□□□ -2.45
snR40snR40 TY1A-DR6P0CX70 440 aa-0.24□□□□□ -2.45
snR40snR40 TY1A-ER1P0CX71 440 aa-0.24□□□□□ -2.45
snR40snR40 TY1A-LR2P0CX72 440 aa-0.24□□□□□ -2.45
snR40snR40 TY1A-PLP0CX73 440 aa-0.24□□□□□ -2.45
snR40snR40 TY1A-JR1P0CX74 440 aa-0.24□□□□□ -2.45
snR40snR40 TY1A-LR3P0CX75 440 aa-0.24□□□□□ -2.45
snR40snR40 TY1A-ML2P0CX76 440 aa-0.24□□□□□ -2.45
snR40snR40 ERG11P10614 530 aa-0.24□□□□□ -2.45
snR40snR40 KIN2P13186 1147 aaKnown RBP-0.24□□□□□ -2.45
snR40snR40 KAR4P25583 335 aa-0.24□□□□□ -2.45
snR40snR40 NTA1P40354 457 aa-0.24□□□□□ -2.45
snR40snR40 NUP53Q03790 475 aa-0.24□□□□□ -2.45
snR40snR40 TY1A-GR1Q12085 440 aa-0.24□□□□□ -2.45
snR40snR40 TY1A-PR3Q6Q5H1 440 aaKnown RBP-0.24□□□□□ -2.45
snR40snR40 TY1A-OLQ92392 440 aaKnown RBP-0.24□□□□□ -2.45
snR40snR40 SSA2P10592 639 aaKnown RBP-0.25□□□□□ -2.45
snR40snR40 SUV3P32580 737 aa-0.25□□□□□ -2.45
snR40snR40 PIK1P39104 1066 aa-0.25□□□□□ -2.45
snR40snR40 YEL020CP39994 560 aa-0.25□□□□□ -2.45
snR40snR40 RIM21P48565 533 aa-0.25□□□□□ -2.45
snR40snR40 NOB1Q08444 459 aaKnown RBP-0.25□□□□□ -2.45
snR40snR40 ENO2P00925 437 aaKnown RBP-0.26□□□□□ -2.45
snR40snR40 NUP1P20676 1076 aa-0.26□□□□□ -2.45
snR40snR40 DMC1P25453 334 aa-0.26□□□□□ -2.45
snR40snR40 GLC3P32775 704 aa-0.26□□□□□ -2.45
snR40snR40 EMP70P32802 667 aa-0.26□□□□□ -2.45
snR40snR40 PIN4P34217 668 aaKnown RBP RIP-Chip data-0.26□□□□□ -2.45not detected
snR40snR40 YBR197CP38306 217 aa-0.26□□□□□ -2.45
snR40snR40 HSE1P38753 452 aa-0.26□□□□□ -2.45
snR40snR40 MND2P40577 368 aa-0.26□□□□□ -2.45
snR40snR40 HXT8P40886 569 aa-0.26□□□□□ -2.45
snR40snR40 CWH41P53008 833 aa-0.26□□□□□ -2.45
snR40snR40 AAT1Q01802 451 aa-0.26□□□□□ -2.45
snR40snR40 RPN13O13563 156 aa-0.27□□□□□ -2.45
snR40snR40 SUP45P12385 437 aaKnown RBP-0.27□□□□□ -2.45
snR40snR40 APL1P27351 700 aa-0.27□□□□□ -2.45
snR40snR40 PEP7P32609 515 aa-0.27□□□□□ -2.45
snR40snR40 TIF3P34167 436 aaKnown RBP-0.27□□□□□ -2.45
snR40snR40 POA1P38218 177 aa-0.27□□□□□ -2.45
snR40snR40 MSC2Q03455 724 aa-0.27□□□□□ -2.45
snR40snR40 GUP2Q08929 609 aa-0.27□□□□□ -2.45
snR40snR40 NPC2Q12408 173 aa-0.27□□□□□ -2.45
snR40snR40 RPP2AP05319 106 aaKnown RBP-0.28□□□□□ -2.45
snR40snR40 HAP4P14064 554 aa-0.28□□□□□ -2.45
snR40snR40 SNF5P18480 905 aa-0.28□□□□□ -2.45
snR40snR40 PHO87P25360 923 aa-0.28□□□□□ -2.45
snR40snR40 ECM32P32644 1121 aaKnown RBP-0.28□□□□□ -2.45
snR40snR40 PAC2P39937 518 aa-0.28□□□□□ -2.45
snR40snR40 ULP2P40537 1034 aaPredicted RBP-0.28□□□□□ -2.45
snR40snR40 NAB6Q03735 1134 aaKnown RBP RIP-Chip data-0.28□□□□□ -2.45not detected
snR40snR40 EAF1Q06337 982 aa-0.28□□□□□ -2.45
snR40snR40 STE12P13574 688 aa-0.29□□□□□ -2.46
snR40snR40 APN1P22936 367 aa-0.29□□□□□ -2.46
snR40snR40 IRS4P36115 615 aaKnown RBP-0.29□□□□□ -2.46
snR40snR40 QNS1P38795 714 aaKnown RBP-0.29□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms